RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 SIK1P57059 783 aa22.81■■□□□ 1.24
CTSB-229ENST00000533572 MTHFSDQ2M296 383 aaKnown RBP22.8■■□□□ 1.24
CTSB-229ENST00000533572 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
CTSB-229ENST00000533572 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
CTSB-229ENST00000533572 MTFR1LQ9H019 292 aa22.8■■□□□ 1.24
CTSB-229ENST00000533572 C5P01031 1676 aa22.8■■□□□ 1.24
CTSB-229ENST00000533572 NEFMP07197 916 aa22.79■■□□□ 1.24
CTSB-229ENST00000533572 CCDC184Q52MB2 194 aa22.79■■□□□ 1.24
CTSB-229ENST00000533572 ATG3Q9NT62 314 aa22.79■■□□□ 1.24
CTSB-229ENST00000533572 ATF5Q9Y2D1 282 aaPredicted RBP22.79■■□□□ 1.24
CTSB-229ENST00000533572 MSH5O43196 834 aa22.78■■□□□ 1.24
CTSB-229ENST00000533572 AK7Q96M32 723 aa22.78■■□□□ 1.24
CTSB-229ENST00000533572 PRKAR2BP31323 418 aa22.77■■□□□ 1.24
CTSB-229ENST00000533572 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
CTSB-229ENST00000533572 RBM42Q9BTD8 480 aaKnown RBP22.77■■□□□ 1.24
CTSB-229ENST00000533572 PNPLA7Q6ZV29 1317 aa22.77■■□□□ 1.24
CTSB-229ENST00000533572 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.23
CTSB-229ENST00000533572 NFATC2IPQ8NCF5 419 aa22.76■■□□□ 1.23
CTSB-229ENST00000533572 SLC16A10Q8TF71 515 aa22.76■■□□□ 1.23
CTSB-229ENST00000533572 SCN11AQ9UI33 1791 aa22.76■■□□□ 1.23
CTSB-229ENST00000533572 RNMTO43148 476 aaKnown RBP22.75■■□□□ 1.23
CTSB-229ENST00000533572 RSPH6AQ9H0K4 717 aa22.75■■□□□ 1.23
CTSB-229ENST00000533572 TAF1LQ8IZX4 1826 aa22.75■■□□□ 1.23
CTSB-229ENST00000533572 FLAD1Q8NFF5 587 aa22.74■■□□□ 1.23
CTSB-229ENST00000533572 SLC52A2Q9HAB3 445 aa22.74■■□□□ 1.23
CTSB-229ENST00000533572 ADAMTS8Q9UP79 889 aa22.74■■□□□ 1.23
CTSB-229ENST00000533572 MAP3K5Q99683 1374 aa22.74■■□□□ 1.23
CTSB-229ENST00000533572 TUBGCP6Q96RT7 1819 aa22.73■■□□□ 1.23
CTSB-229ENST00000533572 LGR6Q9HBX8 967 aa22.73■■□□□ 1.23
CTSB-229ENST00000533572 C4BP0C0L5 1744 aa22.73■■□□□ 1.23
CTSB-229ENST00000533572 GNAT3A8MTJ3 354 aa22.72■■□□□ 1.23
CTSB-229ENST00000533572 LINC00116Q8NCU8 138 aa22.71■■□□□ 1.23
CTSB-229ENST00000533572 MAPK8IP3Q9UPT6 1336 aa22.71■■□□□ 1.23
CTSB-229ENST00000533572 PTCD1O75127 700 aaKnown RBP22.7■■□□□ 1.22
CTSB-229ENST00000533572 POLD1P28340 1107 aa22.7■■□□□ 1.22
CTSB-229ENST00000533572 ITPK1Q13572 414 aa22.7■■□□□ 1.22
CTSB-229ENST00000533572 MRC1P22897 1456 aa22.7■■□□□ 1.22
CTSB-229ENST00000533572 PHF14O94880 888 aa22.69■■□□□ 1.22
CTSB-229ENST00000533572 PTGER2P43116 358 aa22.69■■□□□ 1.22
CTSB-229ENST00000533572 TEFQ10587 303 aa22.69■■□□□ 1.22
CTSB-229ENST00000533572 COL23A1Q86Y22 540 aaPredicted RBP22.69■■□□□ 1.22
CTSB-229ENST00000533572 FAM9BQ8IZU0 186 aa22.69■■□□□ 1.22
CTSB-229ENST00000533572 RUNDC1Q96C34 613 aa22.69■■□□□ 1.22
CTSB-229ENST00000533572 PHACTR3Q96KR7 559 aa22.69■■□□□ 1.22
CTSB-229ENST00000533572 GNPATO15228 680 aa22.68■■□□□ 1.22
CTSB-229ENST00000533572 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
CTSB-229ENST00000533572 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
CTSB-229ENST00000533572 PLEKHF1Q96S99 279 aa22.67■■□□□ 1.22
CTSB-229ENST00000533572 ADAMTS7Q9UKP4 1686 aa22.66■■□□□ 1.22
CTSB-229ENST00000533572 SSFA2P28290 1259 aa22.66■■□□□ 1.22
CTSB-229ENST00000533572 ARXQ96QS3 562 aa22.66■■□□□ 1.22
CTSB-229ENST00000533572 ZNF831Q5JPB2 1677 aa22.65■■□□□ 1.22
CTSB-229ENST00000533572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.65■■□□□ 1.22
CTSB-229ENST00000533572 TTC5Q8N0Z6 440 aa22.65■■□□□ 1.22
CTSB-229ENST00000533572 SLC4A9Q96Q91 983 aa22.65■■□□□ 1.22
CTSB-229ENST00000533572 SLC39A6Q13433 755 aa22.64■■□□□ 1.21
CTSB-229ENST00000533572 SGIP1Q9BQI5 828 aa22.64■■□□□ 1.21
CTSB-229ENST00000533572 UBR3Q6ZT12 1888 aa22.63■■□□□ 1.21
CTSB-229ENST00000533572 IL17REQ8NFR9 667 aa22.63■■□□□ 1.21
CTSB-229ENST00000533572 RTCBQ9Y3I0 505 aaKnown RBP22.63■■□□□ 1.21
CTSB-229ENST00000533572 CNTNAP4Q9C0A0 1308 aa22.62■■□□□ 1.21
CTSB-229ENST00000533572 DCAF8L1A6NGE4 600 aa22.62■■□□□ 1.21
CTSB-229ENST00000533572 RC3H1Q5TC82 1133 aaKnown RBP22.62■■□□□ 1.21
CTSB-229ENST00000533572 MSL1Q68DK7 614 aa22.62■■□□□ 1.21
CTSB-229ENST00000533572 NCBP3Q53F19 620 aaKnown RBP22.61■■□□□ 1.21
CTSB-229ENST00000533572 KLHL34Q8N239 644 aa22.61■■□□□ 1.21
CTSB-229ENST00000533572 NGEFQ8N5V2 710 aa22.61■■□□□ 1.21
CTSB-229ENST00000533572 CCDC146Q8IYE0 955 aa22.6■■□□□ 1.21
CTSB-229ENST00000533572 FHDC1Q9C0D6 1143 aaPredicted RBP22.6■■□□□ 1.21
CTSB-229ENST00000533572 COL5A3P25940 1745 aaPredicted RBP22.6■■□□□ 1.21
CTSB-229ENST00000533572 HTATSF1O43719 755 aaKnown RBP22.59■■□□□ 1.21
CTSB-229ENST00000533572 LMOD3Q0VAK6 560 aa22.59■■□□□ 1.21
CTSB-229ENST00000533572 NFE2L2Q16236 605 aa22.59■■□□□ 1.21
CTSB-229ENST00000533572 TRAPPC3LQ5T215 181 aa22.59■■□□□ 1.21
CTSB-229ENST00000533572 SMIM5Q71RC9 77 aa22.59■■□□□ 1.21
CTSB-229ENST00000533572 AMIGO3Q86WK7 504 aa22.59■■□□□ 1.21
CTSB-229ENST00000533572 CEMIPQ8WUJ3 1361 aa22.59■■□□□ 1.21
CTSB-229ENST00000533572 ADRA2BP18089 450 aa22.58■■□□□ 1.21
CTSB-229ENST00000533572 CRKLP46109 303 aaKnown RBP22.58■■□□□ 1.21
CTSB-229ENST00000533572 RPS6KA4O75676 772 aa22.57■■□□□ 1.2
CTSB-229ENST00000533572 MCM10Q7L590 875 aa22.57■■□□□ 1.2
CTSB-229ENST00000533572 DNAJC10Q8IXB1 793 aa22.57■■□□□ 1.2
CTSB-229ENST00000533572 TJP1Q07157 1748 aa22.57■■□□□ 1.2
CTSB-229ENST00000533572 KCPQ6ZWJ8 1503 aa22.57■■□□□ 1.2
CTSB-229ENST00000533572 BTBD11A6QL63 1104 aa22.56■■□□□ 1.2
CTSB-229ENST00000533572 TMPOP42166 694 aaKnown RBP22.56■■□□□ 1.2
CTSB-229ENST00000533572 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
CTSB-229ENST00000533572 VSIG10Q8N0Z9 540 aa22.56■■□□□ 1.2
CTSB-229ENST00000533572 SYT17Q9BSW7 474 aa22.56■■□□□ 1.2
CTSB-229ENST00000533572 COL24A1Q17RW2 1714 aa22.56■■□□□ 1.2
CTSB-229ENST00000533572 CICQ96RK0 1608 aaPredicted RBP22.56■■□□□ 1.2
CTSB-229ENST00000533572 APAF1O14727 1248 aa22.55■■□□□ 1.2
CTSB-229ENST00000533572 RFC4P35249 363 aa22.55■■□□□ 1.2
CTSB-229ENST00000533572 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
CTSB-229ENST00000533572 SIPA1L3O60292 1781 aaPredicted RBP22.53■■□□□ 1.2
CTSB-229ENST00000533572 RIPK4P57078 832 aa22.53■■□□□ 1.2
CTSB-229ENST00000533572 DCTN1Q14203 1278 aa22.53■■□□□ 1.2
CTSB-229ENST00000533572 FMNL2Q96PY5 1086 aa22.53■■□□□ 1.2
CTSB-229ENST00000533572 UBR2Q8IWV8 1755 aa22.53■■□□□ 1.2
CTSB-229ENST00000533572 STARD3NLO95772 234 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms