RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 RTL1A6NKG5 1358 aa18.16■□□□□ 0.5
NXF1-213ENST00000532297 NRKQ7Z2Y5 1582 aa18.16■□□□□ 0.5
NXF1-213ENST00000532297 CHL1O00533 1208 aa18.15■□□□□ 0.5
NXF1-213ENST00000532297 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
NXF1-213ENST00000532297 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
NXF1-213ENST00000532297 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
NXF1-213ENST00000532297 RNF214Q8ND24 703 aa18.15■□□□□ 0.5
NXF1-213ENST00000532297 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.5
NXF1-213ENST00000532297 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.5
NXF1-213ENST00000532297 USP26Q9BXU7 913 aa18.14■□□□□ 0.5
NXF1-213ENST00000532297 AGLP35573 1532 aa18.14■□□□□ 0.49
NXF1-213ENST00000532297 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
NXF1-213ENST00000532297 EXOC6BQ9Y2D4 811 aa18.14■□□□□ 0.49
NXF1-213ENST00000532297 NSFL1CQ9UNZ2 370 aaKnown RBP18.13■□□□□ 0.49
NXF1-213ENST00000532297 ZDHHC9Q9Y397 364 aa18.13■□□□□ 0.49
NXF1-213ENST00000532297 PTMAP06454 111 aaKnown RBP18.13■□□□□ 0.49
NXF1-213ENST00000532297 OVOS2A0A0J9YW53 1432 aa18.13■□□□□ 0.49
NXF1-213ENST00000532297 OVOS2Q6IE36 1432 aa18.13■□□□□ 0.49
NXF1-213ENST00000532297 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
NXF1-213ENST00000532297 ST18O60284 1047 aa18.13■□□□□ 0.49
NXF1-213ENST00000532297 TSPYL4Q9UJ04 414 aa18.12■□□□□ 0.49
NXF1-213ENST00000532297 RGPD8O14715 1765 aaPredicted RBP18.12■□□□□ 0.49
NXF1-213ENST00000532297 REREQ9P2R6 1566 aa18.12■□□□□ 0.49
NXF1-213ENST00000532297 NOL8Q76FK4 1167 aaKnown RBP18.12■□□□□ 0.49
NXF1-213ENST00000532297 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
NXF1-213ENST00000532297 CRB1P82279 1406 aa18.11■□□□□ 0.49
NXF1-213ENST00000532297 ADAMTS13Q76LX8 1427 aa18.11■□□□□ 0.49
NXF1-213ENST00000532297 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
NXF1-213ENST00000532297 LTV1Q96GA3 475 aaPredicted RBP18.11■□□□□ 0.49
NXF1-213ENST00000532297 CCDC94Q9BW85 323 aaPredicted RBP18.11■□□□□ 0.49
NXF1-213ENST00000532297 TNRQ92752 1358 aa18.11■□□□□ 0.49
NXF1-213ENST00000532297 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
NXF1-213ENST00000532297 ZHX1Q9UKY1 873 aaPredicted RBP18.11■□□□□ 0.49
NXF1-213ENST00000532297 CEP170BQ9Y4F5 1589 aaPredicted RBP18.11■□□□□ 0.49
NXF1-213ENST00000532297 USP6P35125 1406 aa18.1■□□□□ 0.49
NXF1-213ENST00000532297 KIAA2012Q0VF49 1180 aa18.1■□□□□ 0.49
NXF1-213ENST00000532297 KIF24Q5T7B8 1368 aa18.1■□□□□ 0.49
NXF1-213ENST00000532297 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
NXF1-213ENST00000532297 TMEM2Q9UHN6 1383 aa18.09■□□□□ 0.49
NXF1-213ENST00000532297 HAP1P54257 671 aaPredicted RBP18.09■□□□□ 0.49
NXF1-213ENST00000532297 UBR1Q8IWV7 1749 aa18.09■□□□□ 0.49
NXF1-213ENST00000532297 TECPR2O15040 1411 aa18.09■□□□□ 0.49
NXF1-213ENST00000532297 USHBP1Q8N6Y0 703 aa18.08■□□□□ 0.49
NXF1-213ENST00000532297 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.08■□□□□ 0.49
NXF1-213ENST00000532297 RGPD1P0DJD0 1748 aa18.08■□□□□ 0.48
NXF1-213ENST00000532297 MBD3O95983 291 aa18.08■□□□□ 0.48
NXF1-213ENST00000532297 TOPAZ1Q8N9V7 1692 aa18.07■□□□□ 0.48
NXF1-213ENST00000532297 MYRIPQ8NFW9 859 aa18.07■□□□□ 0.48
NXF1-213ENST00000532297 EYA1Q99502 592 aa18.07■□□□□ 0.48
NXF1-213ENST00000532297 RPAP2Q8IXW5 612 aaPredicted RBP18.07■□□□□ 0.48
NXF1-213ENST00000532297 JARID2Q92833 1246 aaPredicted RBP18.07■□□□□ 0.48
NXF1-213ENST00000532297 PNMA6EA0A0J9YXQ4 647 aa18.06■□□□□ 0.48
NXF1-213ENST00000532297 CASC1Q6TDU7 716 aa18.06■□□□□ 0.48
NXF1-213ENST00000532297 RBM33Q96EV2 1170 aaKnown RBP18.06■□□□□ 0.48
NXF1-213ENST00000532297 TSPY26PQ9H489 355 aa18.06■□□□□ 0.48
NXF1-213ENST00000532297 FMN2Q9NZ56 1722 aa18.06■□□□□ 0.48
NXF1-213ENST00000532297 DMTNQ08495 405 aa18.05■□□□□ 0.48
NXF1-213ENST00000532297 RTF1Q92541 710 aaKnown RBP18.05■□□□□ 0.48
NXF1-213ENST00000532297 AMPHP49418 695 aa18.05■□□□□ 0.48
NXF1-213ENST00000532297 NALCNQ8IZF0 1738 aa18.05■□□□□ 0.48
NXF1-213ENST00000532297 NGDNQ8NEJ9 315 aaKnown RBP18.04■□□□□ 0.48
NXF1-213ENST00000532297 TSC1Q92574 1164 aa18.04■□□□□ 0.48
NXF1-213ENST00000532297 DTNBO60941 627 aa18.04■□□□□ 0.48
NXF1-213ENST00000532297 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
NXF1-213ENST00000532297 MPNDQ8N594 471 aa18.04■□□□□ 0.48
NXF1-213ENST00000532297 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
NXF1-213ENST00000532297 FKBP5Q13451 457 aaPredicted RBP18.03■□□□□ 0.48
NXF1-213ENST00000532297 FOXD4L6Q3SYB3 417 aaPredicted RBP18.03■□□□□ 0.48
NXF1-213ENST00000532297 UTP14CQ5TAP6 766 aaKnown RBP18.03■□□□□ 0.48
NXF1-213ENST00000532297 FOXD4L3Q6VB84 417 aaPredicted RBP18.03■□□□□ 0.48
NXF1-213ENST00000532297 SIRT1Q96EB6 747 aa18.03■□□□□ 0.48
NXF1-213ENST00000532297 PTPRCP08575 1304 aa18.03■□□□□ 0.48
NXF1-213ENST00000532297 MAP4K4O95819 1239 aaPredicted RBP18.03■□□□□ 0.48
NXF1-213ENST00000532297 ZSCAN20P17040 1043 aaPredicted RBP18.03■□□□□ 0.48
NXF1-213ENST00000532297 PDE1AP54750 535 aa18.03■□□□□ 0.48
NXF1-213ENST00000532297 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
NXF1-213ENST00000532297 AMOTL2Q9Y2J4 779 aa18.03■□□□□ 0.48
NXF1-213ENST00000532297 KIAA0232Q92628 1395 aa18.03■□□□□ 0.48
NXF1-213ENST00000532297 A0A0U1RQG5 324 aaPredicted RBP18.02■□□□□ 0.48
NXF1-213ENST00000532297 UNC5CLQ8IV45 518 aa18.02■□□□□ 0.48
NXF1-213ENST00000532297 IL25Q9H293 177 aa18.02■□□□□ 0.48
NXF1-213ENST00000532297 PLEKHG3A1L390 1219 aa18.02■□□□□ 0.47
NXF1-213ENST00000532297 REC8O95072 547 aa18.02■□□□□ 0.47
NXF1-213ENST00000532297 RILPL2Q969X0 211 aa18.02■□□□□ 0.47
NXF1-213ENST00000532297 PRIMPOLQ96LW4 560 aa18.02■□□□□ 0.47
NXF1-213ENST00000532297 ZNF830Q96NB3 372 aaPredicted RBP18.02■□□□□ 0.47
NXF1-213ENST00000532297 IL1RAPL2Q9NP60 686 aa18.02■□□□□ 0.47
NXF1-213ENST00000532297 C14orf37Q86TY3 774 aa18.01■□□□□ 0.47
NXF1-213ENST00000532297 ZNF710Q8N1W2 664 aa18.01■□□□□ 0.47
NXF1-213ENST00000532297 SYAP1Q96A49 352 aaPredicted RBP18.01■□□□□ 0.47
NXF1-213ENST00000532297 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
NXF1-213ENST00000532297 TPRNQ4KMQ1 711 aa18■□□□□ 0.47
NXF1-213ENST00000532297 LRRFIP2Q9Y608 721 aaKnown RBP18■□□□□ 0.47
NXF1-213ENST00000532297 NLRP6P59044 892 aa18■□□□□ 0.47
NXF1-213ENST00000532297 CBX1P83916 185 aa18■□□□□ 0.47
NXF1-213ENST00000532297 FLIIQ13045 1269 aa18■□□□□ 0.47
NXF1-213ENST00000532297 KIF13AQ9H1H9 1805 aa17.99■□□□□ 0.47
NXF1-213ENST00000532297 TRIM6-TRIM34B2RNG4 842 aa17.99■□□□□ 0.47
NXF1-213ENST00000532297 NEK4P51957 841 aa17.99■□□□□ 0.47
NXF1-213ENST00000532297 NOLC1Q14978 699 aaKnown RBP eCLIP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms