RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 RIPK4P57078 832 aa18.24■□□□□ 0.51
SMPD1-206ENST00000531336 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
SMPD1-206ENST00000531336 NEUROD2Q15784 382 aa18.24■□□□□ 0.51
SMPD1-206ENST00000531336 IL17REQ8NFR9 667 aa18.24■□□□□ 0.51
SMPD1-206ENST00000531336 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
SMPD1-206ENST00000531336 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
SMPD1-206ENST00000531336 PALLDQ8WX93 1383 aa18.23■□□□□ 0.51
SMPD1-206ENST00000531336 APAF1O14727 1248 aa18.23■□□□□ 0.51
SMPD1-206ENST00000531336 NFATC2IPQ8NCF5 419 aa18.23■□□□□ 0.51
SMPD1-206ENST00000531336 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
SMPD1-206ENST00000531336 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
SMPD1-206ENST00000531336 PLSCR1O15162 318 aa18.22■□□□□ 0.51
SMPD1-206ENST00000531336 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
SMPD1-206ENST00000531336 TEFQ10587 303 aa18.22■□□□□ 0.51
SMPD1-206ENST00000531336 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.51
SMPD1-206ENST00000531336 ASAP1Q9ULH1 1129 aa18.21■□□□□ 0.51
SMPD1-206ENST00000531336 UBR2Q8IWV8 1755 aa18.2■□□□□ 0.5
SMPD1-206ENST00000531336 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
SMPD1-206ENST00000531336 TXNRD1Q16881 649 aa18.2■□□□□ 0.5
SMPD1-206ENST00000531336 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-206ENST00000531336 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
SMPD1-206ENST00000531336 C5P01031 1676 aa18.19■□□□□ 0.5
SMPD1-206ENST00000531336 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
SMPD1-206ENST00000531336 KDM3BQ7LBC6 1761 aa18.18■□□□□ 0.5
SMPD1-206ENST00000531336 KCNQ4P56696 695 aa18.17■□□□□ 0.5
SMPD1-206ENST00000531336 SLC39A6Q13433 755 aa18.17■□□□□ 0.5
SMPD1-206ENST00000531336 PROM2Q8N271 834 aa18.17■□□□□ 0.5
SMPD1-206ENST00000531336 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-206ENST00000531336 TRIM35Q9UPQ4 493 aa18.17■□□□□ 0.5
SMPD1-206ENST00000531336 KCPQ6ZWJ8 1503 aa18.17■□□□□ 0.5
SMPD1-206ENST00000531336 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
SMPD1-206ENST00000531336 TJP1Q07157 1748 aa18.16■□□□□ 0.5
SMPD1-206ENST00000531336 RBM42Q9BTD8 480 aaKnown RBP18.15■□□□□ 0.5
SMPD1-206ENST00000531336 COL5A3P25940 1745 aaPredicted RBP18.15■□□□□ 0.5
SMPD1-206ENST00000531336 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-206ENST00000531336 LOC102724428A0A0B4J2F2 783 aa18.14■□□□□ 0.49
SMPD1-206ENST00000531336 BTBD11A6QL63 1104 aa18.14■□□□□ 0.49
SMPD1-206ENST00000531336 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
SMPD1-206ENST00000531336 SIK1P57059 783 aa18.14■□□□□ 0.49
SMPD1-206ENST00000531336 SLC27A3Q5K4L6 730 aa18.14■□□□□ 0.49
SMPD1-206ENST00000531336 TTC5Q8N0Z6 440 aa18.14■□□□□ 0.49
SMPD1-206ENST00000531336 LRRC4BQ9NT99 713 aa18.14■□□□□ 0.49
SMPD1-206ENST00000531336 SALL2Q9Y467 1007 aaPredicted RBP18.13■□□□□ 0.49
SMPD1-206ENST00000531336 TUBGCP6Q96RT7 1819 aa18.13■□□□□ 0.49
SMPD1-206ENST00000531336 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
SMPD1-206ENST00000531336 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-206ENST00000531336 KCNQ3O43525 872 aa18.11■□□□□ 0.49
SMPD1-206ENST00000531336 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
SMPD1-206ENST00000531336 ZNF790Q6PG37 636 aa18.11■□□□□ 0.49
SMPD1-206ENST00000531336 ANO8Q9HCE9 1232 aaPredicted RBP18.11■□□□□ 0.49
SMPD1-206ENST00000531336 MIS18AQ9NYP9 233 aa18.11■□□□□ 0.49
SMPD1-206ENST00000531336 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
SMPD1-206ENST00000531336 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
SMPD1-206ENST00000531336 ITPK1Q13572 414 aa18.09■□□□□ 0.49
SMPD1-206ENST00000531336 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
SMPD1-206ENST00000531336 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
SMPD1-206ENST00000531336 LAMB4A4D0S4 1761 aa18.09■□□□□ 0.49
SMPD1-206ENST00000531336 CCDC27Q2M243 656 aa18.08■□□□□ 0.48
SMPD1-206ENST00000531336 LINC00116Q8NCU8 138 aa18.08■□□□□ 0.48
SMPD1-206ENST00000531336 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-206ENST00000531336 QSER1Q2KHR3 1735 aa18.08■□□□□ 0.48
SMPD1-206ENST00000531336 HEG1Q9ULI3 1381 aa18.07■□□□□ 0.48
SMPD1-206ENST00000531336 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
SMPD1-206ENST00000531336 ZNF827Q17R98 1081 aa18.07■□□□□ 0.48
SMPD1-206ENST00000531336 WWC1Q8IX03 1113 aa18.07■□□□□ 0.48
SMPD1-206ENST00000531336 FMNL2Q96PY5 1086 aa18.07■□□□□ 0.48
SMPD1-206ENST00000531336 STK32BQ9NY57 414 aa18.07■□□□□ 0.48
SMPD1-206ENST00000531336 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
SMPD1-206ENST00000531336 MYH14Q7Z406 1995 aaKnown RBP18.06■□□□□ 0.48
SMPD1-206ENST00000531336 PSDA5PKW4 1024 aaPredicted RBP18.05■□□□□ 0.48
SMPD1-206ENST00000531336 R3HDM1Q15032 1099 aaKnown RBP18.05■□□□□ 0.48
SMPD1-206ENST00000531336 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
SMPD1-206ENST00000531336 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
SMPD1-206ENST00000531336 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
SMPD1-206ENST00000531336 AKT1S1Q96B36 256 aa18.04■□□□□ 0.48
SMPD1-206ENST00000531336 AK7Q96M32 723 aa18.04■□□□□ 0.48
SMPD1-206ENST00000531336 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
SMPD1-206ENST00000531336 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
SMPD1-206ENST00000531336 NGEFQ8N5V2 710 aa18.03■□□□□ 0.48
SMPD1-206ENST00000531336 CFAP44Q96MT7 982 aa18.03■□□□□ 0.48
SMPD1-206ENST00000531336 IFT57Q9NWB7 429 aa18.03■□□□□ 0.48
SMPD1-206ENST00000531336 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
SMPD1-206ENST00000531336 CASZ1Q86V15 1759 aa18.03■□□□□ 0.48
SMPD1-206ENST00000531336 CHL1O00533 1208 aa18.02■□□□□ 0.48
SMPD1-206ENST00000531336 HMGB2P26583 209 aaKnown RBP18.02■□□□□ 0.48
SMPD1-206ENST00000531336 GNAI1P63096 354 aa18.02■□□□□ 0.48
SMPD1-206ENST00000531336 MBIPQ9NS73 344 aa18.02■□□□□ 0.48
SMPD1-206ENST00000531336 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
SMPD1-206ENST00000531336 PRAMEF22A3QJZ6 481 aa18.01■□□□□ 0.47
SMPD1-206ENST00000531336 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
SMPD1-206ENST00000531336 CRKLP46109 303 aaKnown RBP18.01■□□□□ 0.47
SMPD1-206ENST00000531336 TFCP2L1Q9NZI6 479 aa18.01■□□□□ 0.47
SMPD1-206ENST00000531336 GNPATO15228 680 aa18■□□□□ 0.47
SMPD1-206ENST00000531336 SNRPA1P09661 255 aaKnown RBP18■□□□□ 0.47
SMPD1-206ENST00000531336 C4AP0C0L4 1744 aa18■□□□□ 0.47
SMPD1-206ENST00000531336 IL16Q14005 1332 aa17.99■□□□□ 0.47
SMPD1-206ENST00000531336 PHF14O94880 888 aa17.99■□□□□ 0.47
SMPD1-206ENST00000531336 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-206ENST00000531336 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
SMPD1-206ENST00000531336 TSR2Q969E8 191 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms