RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
CCS-206ENST00000530961 NFATC2IPQ8NCF5 419 aa20.17■□□□□ 0.82
CCS-206ENST00000530961 SLC52A2Q9HAB3 445 aa20.17■□□□□ 0.82
CCS-206ENST00000530961 ZBTB7AO95365 584 aa20.16■□□□□ 0.82
CCS-206ENST00000530961 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
CCS-206ENST00000530961 PTGER2P43116 358 aa20.16■□□□□ 0.82
CCS-206ENST00000530961 HSPA6P17066 643 aa20.15■□□□□ 0.82
CCS-206ENST00000530961 RIPK4P57078 832 aa20.15■□□□□ 0.82
CCS-206ENST00000530961 LMOD3Q0VAK6 560 aa20.15■□□□□ 0.82
CCS-206ENST00000530961 CEMIPQ8WUJ3 1361 aa20.14■□□□□ 0.81
CCS-206ENST00000530961 HMGB2P26583 209 aaKnown RBP20.14■□□□□ 0.81
CCS-206ENST00000530961 TEFQ10587 303 aa20.14■□□□□ 0.81
CCS-206ENST00000530961 TXNRD1Q16881 649 aa20.14■□□□□ 0.81
CCS-206ENST00000530961 MIER1Q8N108 512 aa20.14■□□□□ 0.81
CCS-206ENST00000530961 GPR162Q16538 588 aa20.13■□□□□ 0.81
CCS-206ENST00000530961 SLC27A3Q5K4L6 730 aa20.13■□□□□ 0.81
CCS-206ENST00000530961 PROM2Q8N271 834 aa20.13■□□□□ 0.81
CCS-206ENST00000530961 ATG3Q9NT62 314 aa20.13■□□□□ 0.81
CCS-206ENST00000530961 APAF1O14727 1248 aa20.12■□□□□ 0.81
CCS-206ENST00000530961 MCM10Q7L590 875 aa20.12■□□□□ 0.81
CCS-206ENST00000530961 FAM9BQ8IZU0 186 aa20.12■□□□□ 0.81
CCS-206ENST00000530961 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
CCS-206ENST00000530961 ATF5Q9Y2D1 282 aaPredicted RBP20.12■□□□□ 0.81
CCS-206ENST00000530961 CASZ1Q86V15 1759 aa20.12■□□□□ 0.81
CCS-206ENST00000530961 SHANK3Q9BYB0 1731 aa20.11■□□□□ 0.81
CCS-206ENST00000530961 PALLDQ8WX93 1383 aa20.1■□□□□ 0.81
CCS-206ENST00000530961 CAPN15O75808 1086 aa20.1■□□□□ 0.81
CCS-206ENST00000530961 SLC34A2O95436 690 aa20.1■□□□□ 0.81
CCS-206ENST00000530961 DCTN1Q14203 1278 aa20.1■□□□□ 0.81
CCS-206ENST00000530961 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
CCS-206ENST00000530961 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
CCS-206ENST00000530961 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
CCS-206ENST00000530961 NHSQ6T4R5 1651 aa20.08■□□□□ 0.81
CCS-206ENST00000530961 TAF7Q15545 349 aaPredicted RBP20.08■□□□□ 0.81
CCS-206ENST00000530961 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
CCS-206ENST00000530961 CCNL1Q9UK58 526 aaPredicted RBP20.08■□□□□ 0.81
CCS-206ENST00000530961 LOC102724428A0A0B4J2F2 783 aa20.07■□□□□ 0.8
CCS-206ENST00000530961 SIK1P57059 783 aa20.07■□□□□ 0.8
CCS-206ENST00000530961 BTBD11A6QL63 1104 aa20.06■□□□□ 0.8
CCS-206ENST00000530961 PDGFDQ9GZP0 370 aaPredicted RBP20.06■□□□□ 0.8
CCS-206ENST00000530961 LRRC4BQ9NT99 713 aa20.06■□□□□ 0.8
CCS-206ENST00000530961 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
CCS-206ENST00000530961 MRC1P22897 1456 aa20.05■□□□□ 0.8
CCS-206ENST00000530961 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
CCS-206ENST00000530961 TTC5Q8N0Z6 440 aa20.05■□□□□ 0.8
CCS-206ENST00000530961 SLC39A6Q13433 755 aa20.04■□□□□ 0.8
CCS-206ENST00000530961 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
CCS-206ENST00000530961 NGEFQ8N5V2 710 aa20.04■□□□□ 0.8
CCS-206ENST00000530961 RBM42Q9BTD8 480 aaKnown RBP20.04■□□□□ 0.8
CCS-206ENST00000530961 THUMPD2Q9BTF0 503 aaKnown RBP20.04■□□□□ 0.8
CCS-206ENST00000530961 MTFR1LQ9H019 292 aa20.04■□□□□ 0.8
CCS-206ENST00000530961 BABAM1Q9NWV8 329 aa20.04■□□□□ 0.8
CCS-206ENST00000530961 PTCD1O75127 700 aaKnown RBP20.03■□□□□ 0.8
CCS-206ENST00000530961 ATP6V1AP38606 617 aa20.03■□□□□ 0.8
CCS-206ENST00000530961 PRELPP51888 382 aa20.02■□□□□ 0.8
CCS-206ENST00000530961 CALD1Q05682 793 aaKnown RBP20.02■□□□□ 0.8
CCS-206ENST00000530961 ARXQ96QS3 562 aa20.02■□□□□ 0.8
CCS-206ENST00000530961 KCNQ4P56696 695 aa20.01■□□□□ 0.79
CCS-206ENST00000530961 VSIG10Q8N0Z9 540 aa20.01■□□□□ 0.79
CCS-206ENST00000530961 DOT1LQ8TEK3 1739 aa20.01■□□□□ 0.79
CCS-206ENST00000530961 SLC4A9Q96Q91 983 aa20■□□□□ 0.79
CCS-206ENST00000530961 STK32BQ9NY57 414 aa20■□□□□ 0.79
CCS-206ENST00000530961 RGPD3A6NKT7 1758 aaPredicted RBP20■□□□□ 0.79
CCS-206ENST00000530961 RGPD4Q7Z3J3 1758 aa20■□□□□ 0.79
CCS-206ENST00000530961 TOGARAM1Q9Y4F4 1720 aa19.99■□□□□ 0.79
CCS-206ENST00000530961 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
CCS-206ENST00000530961 SGIP1Q9BQI5 828 aa19.99■□□□□ 0.79
CCS-206ENST00000530961 ADAMTS7Q9UKP4 1686 aa19.99■□□□□ 0.79
CCS-206ENST00000530961 SBF2Q86WG5 1849 aa19.98■□□□□ 0.79
CCS-206ENST00000530961 ITPK1Q13572 414 aa19.98■□□□□ 0.79
CCS-206ENST00000530961 SLC15A2Q16348 729 aa19.98■□□□□ 0.79
CCS-206ENST00000530961 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
CCS-206ENST00000530961 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
CCS-206ENST00000530961 ZNF496Q96IT1 587 aaPredicted RBP19.98■□□□□ 0.79
CCS-206ENST00000530961 TEX13AQ9BXU3 409 aaPredicted RBP19.98■□□□□ 0.79
CCS-206ENST00000530961 MIS18AQ9NYP9 233 aa19.98■□□□□ 0.79
CCS-206ENST00000530961 KCNQ3O43525 872 aa19.97■□□□□ 0.79
CCS-206ENST00000530961 AKT1S1Q96B36 256 aa19.97■□□□□ 0.79
CCS-206ENST00000530961 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
CCS-206ENST00000530961 GPBP1L1Q9HC44 474 aaPredicted RBP19.97■□□□□ 0.79
CCS-206ENST00000530961 PCDH10Q9P2E7 1040 aa19.97■□□□□ 0.79
CCS-206ENST00000530961 TSPYL4Q9UJ04 414 aa19.97■□□□□ 0.79
CCS-206ENST00000530961 CHL1O00533 1208 aa19.96■□□□□ 0.79
CCS-206ENST00000530961 RC3H1Q5TC82 1133 aaKnown RBP19.95■□□□□ 0.78
CCS-206ENST00000530961 LINC00116Q8NCU8 138 aa19.95■□□□□ 0.78
CCS-206ENST00000530961 IFT57Q9NWB7 429 aa19.95■□□□□ 0.78
CCS-206ENST00000530961 BTAF1O14981 1849 aa19.95■□□□□ 0.78
CCS-206ENST00000530961 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
CCS-206ENST00000530961 STARD3NLO95772 234 aa19.94■□□□□ 0.78
CCS-206ENST00000530961 SNRPA1P09661 255 aaKnown RBP19.94■□□□□ 0.78
CCS-206ENST00000530961 GNAI1P63096 354 aa19.94■□□□□ 0.78
CCS-206ENST00000530961 COL13A1Q5TAT6 717 aaPredicted RBP19.94■□□□□ 0.78
CCS-206ENST00000530961 WDR63Q8IWG1 891 aa19.94■□□□□ 0.78
CCS-206ENST00000530961 TNS4Q8IZW8 715 aa19.94■□□□□ 0.78
CCS-206ENST00000530961 TFCP2L1Q9NZI6 479 aa19.94■□□□□ 0.78
CCS-206ENST00000530961 ATP10DQ9P241 1426 aa19.93■□□□□ 0.78
CCS-206ENST00000530961 EIF4A1P60842 406 aaKnown RBP19.93■□□□□ 0.78
CCS-206ENST00000530961 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
CCS-206ENST00000530961 DNAJC10Q8IXB1 793 aa19.93■□□□□ 0.78
CCS-206ENST00000530961 AK7Q96M32 723 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms