RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 NCKAP5LQ9HCH0 1330 aa17.76■□□□□ 0.43
LRP5-206ENST00000529993 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
LRP5-206ENST00000529993 MRPL50Q8N5N7 158 aaKnown RBP17.75■□□□□ 0.43
LRP5-206ENST00000529993 COL17A1Q9UMD9 1497 aaPredicted RBP17.75■□□□□ 0.43
LRP5-206ENST00000529993 LARP1Q6PKG0 1096 aaKnown RBP17.75■□□□□ 0.43
LRP5-206ENST00000529993 PPP1R42Q7Z4L9 355 aa17.75■□□□□ 0.43
LRP5-206ENST00000529993 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.75■□□□□ 0.434e-6■■■■□ 23.9
LRP5-206ENST00000529993 TTC21BQ7Z4L5 1316 aa17.75■□□□□ 0.43
LRP5-206ENST00000529993 CCDC47Q96A33 483 aaKnown RBP17.75■□□□□ 0.43
LRP5-206ENST00000529993 PIK3C2GO75747 1445 aa17.75■□□□□ 0.43
LRP5-206ENST00000529993 MAGI3Q5TCQ9 1506 aa17.75■□□□□ 0.43
LRP5-206ENST00000529993 SDSP20132 328 aa17.75■□□□□ 0.43
LRP5-206ENST00000529993 CAMK4Q16566 473 aa17.75■□□□□ 0.43
LRP5-206ENST00000529993 ZNF771Q7L3S4 317 aaPredicted RBP17.75■□□□□ 0.43
LRP5-206ENST00000529993 DBF4Q9UBU7 674 aaPredicted RBP17.74■□□□□ 0.43
LRP5-206ENST00000529993 SHANK2Q9UPX8 1470 aa17.74■□□□□ 0.43
LRP5-206ENST00000529993 XBP1P17861 261 aa17.74■□□□□ 0.43
LRP5-206ENST00000529993 MNS1Q8NEH6 495 aa17.74■□□□□ 0.43
LRP5-206ENST00000529993 ARHGAP45Q92619 1136 aa17.74■□□□□ 0.43
LRP5-206ENST00000529993 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
LRP5-206ENST00000529993 UHRF1BP1Q6BDS2 1440 aa17.74■□□□□ 0.43
LRP5-206ENST00000529993 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
LRP5-206ENST00000529993 NUP62CLQ9H1M0 184 aa17.73■□□□□ 0.43
LRP5-206ENST00000529993 EIF4A2Q14240 407 aaKnown RBP17.73■□□□□ 0.43
LRP5-206ENST00000529993 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
LRP5-206ENST00000529993 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
LRP5-206ENST00000529993 MPHOSPH8Q99549 860 aa17.73■□□□□ 0.43
LRP5-206ENST00000529993 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
LRP5-206ENST00000529993 VAMP4O75379 141 aa17.72■□□□□ 0.43
LRP5-206ENST00000529993 IDH1O75874 414 aaKnown RBP17.72■□□□□ 0.43
LRP5-206ENST00000529993 TNNT3P45378 269 aaPredicted RBP17.72■□□□□ 0.43
LRP5-206ENST00000529993 JARID2Q92833 1246 aaPredicted RBP17.72■□□□□ 0.43
LRP5-206ENST00000529993 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
LRP5-206ENST00000529993 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
LRP5-206ENST00000529993 KRT32Q14532 448 aa17.72■□□□□ 0.43
LRP5-206ENST00000529993 TTLL5Q6EMB2 1281 aa17.72■□□□□ 0.43
LRP5-206ENST00000529993 BAG4O95429 457 aaKnown RBP17.71■□□□□ 0.43
LRP5-206ENST00000529993 NUP133Q8WUM0 1156 aa17.71■□□□□ 0.43
LRP5-206ENST00000529993 PPIP5K1Q6PFW1 1433 aa17.71■□□□□ 0.43
LRP5-206ENST00000529993 BRPF1P55201 1214 aaPredicted RBP17.7■□□□□ 0.42
LRP5-206ENST00000529993 WDR7Q9Y4E6 1490 aa17.7■□□□□ 0.42
LRP5-206ENST00000529993 ANKRD44Q8N8A2 993 aa17.7■□□□□ 0.42
LRP5-206ENST00000529993 ZBTB40Q9NUA8 1239 aa17.69■□□□□ 0.42
LRP5-206ENST00000529993 FILIP1Q7Z7B0 1213 aa17.69■□□□□ 0.42
LRP5-206ENST00000529993 ZSCAN30Q86W11 494 aa17.69■□□□□ 0.42
LRP5-206ENST00000529993 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
LRP5-206ENST00000529993 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
LRP5-206ENST00000529993 A0A087WZG4 1122 aa17.69■□□□□ 0.42
LRP5-206ENST00000529993 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
LRP5-206ENST00000529993 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
LRP5-206ENST00000529993 ATP5J2-PTCD1G3V325 749 aa17.69■□□□□ 0.42
LRP5-206ENST00000529993 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
LRP5-206ENST00000529993 ECHDC1Q9NTX5 307 aa17.69■□□□□ 0.42
LRP5-206ENST00000529993 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
LRP5-206ENST00000529993 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
LRP5-206ENST00000529993 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
LRP5-206ENST00000529993 PDE1AP54750 535 aa17.68■□□□□ 0.42
LRP5-206ENST00000529993 MEX3CQ5U5Q3 659 aaKnown RBP17.68■□□□□ 0.42
LRP5-206ENST00000529993 GUCY1B3Q02153 619 aa17.68■□□□□ 0.42
LRP5-206ENST00000529993 EIF2AK4Q9P2K8 1649 aaKnown RBP17.68■□□□□ 0.42
LRP5-206ENST00000529993 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 NACAP1Q9BZK3 213 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 CTNNA3Q9UI47 895 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 ADGRL2O95490 1459 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 PPFIA3O75145 1194 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 SERPINC1P01008 464 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 MTHFSDQ2M296 383 aaKnown RBP17.67■□□□□ 0.42
LRP5-206ENST00000529993 METTL24Q5JXM2 366 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 TRIM22Q8IYM9 498 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 CEP89Q96ST8 783 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 CHPF2Q9P2E5 772 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 CCDC69A6NI79 296 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 MAP3K11Q16584 847 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 HYPKQ9NX55 129 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
LRP5-206ENST00000529993 IFIT1P09914 478 aaKnown RBP17.67■□□□□ 0.42
LRP5-206ENST00000529993 RHPN1Q8TCX5 695 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 ZBTB3Q9H5J0 574 aa17.67■□□□□ 0.42
LRP5-206ENST00000529993 HMGN5P82970 282 aaKnown RBP17.66■□□□□ 0.42
LRP5-206ENST00000529993 TDO2P48775 406 aa17.66■□□□□ 0.42
LRP5-206ENST00000529993 GPS2Q13227 327 aa17.66■□□□□ 0.42
LRP5-206ENST00000529993 TNRQ92752 1358 aa17.66■□□□□ 0.42
LRP5-206ENST00000529993 SMC5Q8IY18 1101 aa17.66■□□□□ 0.42
LRP5-206ENST00000529993 PIK3R4Q99570 1358 aa17.65■□□□□ 0.42
LRP5-206ENST00000529993 UBE3BQ7Z3V4 1068 aa17.65■□□□□ 0.42
LRP5-206ENST00000529993 TMX3Q96JJ7 454 aa17.65■□□□□ 0.42
LRP5-206ENST00000529993 TFIP11Q9UBB9 837 aaKnown RBP17.65■□□□□ 0.42
LRP5-206ENST00000529993 SPATA31E1Q6ZUB1 1445 aa17.65■□□□□ 0.42
LRP5-206ENST00000529993 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
LRP5-206ENST00000529993 UQCRHLA0A096LP55 91 aa17.65■□□□□ 0.42
LRP5-206ENST00000529993 UQCRHP07919 91 aa17.65■□□□□ 0.42
LRP5-206ENST00000529993 ZSCAN25Q6NSZ9 544 aa17.65■□□□□ 0.42
LRP5-206ENST00000529993 CHRNA2Q15822 529 aa17.64■□□□□ 0.41
LRP5-206ENST00000529993 IMMTQ16891 758 aaKnown RBP17.64■□□□□ 0.41
LRP5-206ENST00000529993 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
LRP5-206ENST00000529993 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.41
LRP5-206ENST00000529993 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
LRP5-206ENST00000529993 CCDC70Q6NSX1 233 aa17.64■□□□□ 0.41
LRP5-206ENST00000529993 BICDL1Q6ZP65 573 aa17.64■□□□□ 0.41
LRP5-206ENST00000529993 KRT28Q7Z3Y7 464 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms