RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
CHD7-209ENST00000529472 SIPA1L3O60292 1781 aaPredicted RBP15□□□□□ -0.01
CHD7-209ENST00000529472 TRIM35Q9UPQ4 493 aa14.99□□□□□ -0.01
CHD7-209ENST00000529472 CCDC125Q86Z20 511 aa14.97□□□□□ -0.01
CHD7-209ENST00000529472 PAPPAQ13219 1627 aa14.96□□□□□ -0.01
CHD7-209ENST00000529472 BAG6P46379 1132 aa14.96□□□□□ -0.01
CHD7-209ENST00000529472 DEFB132Q7Z7B7 95 aa14.96□□□□□ -0.01
CHD7-209ENST00000529472 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
CHD7-209ENST00000529472 EN1Q05925 392 aaPredicted RBP14.95□□□□□ -0.02
CHD7-209ENST00000529472 ATG3Q9NT62 314 aa14.95□□□□□ -0.02
CHD7-209ENST00000529472 RGPD3A6NKT7 1758 aaPredicted RBP14.95□□□□□ -0.02
CHD7-209ENST00000529472 RGPD4Q7Z3J3 1758 aa14.95□□□□□ -0.02
CHD7-209ENST00000529472 PALLDQ8WX93 1383 aa14.95□□□□□ -0.02
CHD7-209ENST00000529472 BTBD11A6QL63 1104 aa14.94□□□□□ -0.02
CHD7-209ENST00000529472 SLC39A6Q13433 755 aa14.94□□□□□ -0.02
CHD7-209ENST00000529472 LY75O60449 1722 aa14.94□□□□□ -0.02
CHD7-209ENST00000529472 SOCS7O14512 581 aa14.93□□□□□ -0.02
CHD7-209ENST00000529472 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
CHD7-209ENST00000529472 CCDC27Q2M243 656 aa14.93□□□□□ -0.02
CHD7-209ENST00000529472 WWC1Q8IX03 1113 aa14.93□□□□□ -0.02
CHD7-209ENST00000529472 SMARCC1Q92922 1105 aaPredicted RBP14.93□□□□□ -0.02
CHD7-209ENST00000529472 MIS18AQ9NYP9 233 aa14.93□□□□□ -0.02
CHD7-209ENST00000529472 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
CHD7-209ENST00000529472 PLSCR1O15162 318 aa14.92□□□□□ -0.02
CHD7-209ENST00000529472 EZH2Q15910 746 aaKnown RBP14.92□□□□□ -0.02
CHD7-209ENST00000529472 TTC5Q8N0Z6 440 aa14.92□□□□□ -0.02
CHD7-209ENST00000529472 KDM3BQ7LBC6 1761 aa14.92□□□□□ -0.02
CHD7-209ENST00000529472 UBR2Q8IWV8 1755 aa14.92□□□□□ -0.02
CHD7-209ENST00000529472 KCNQ3O43525 872 aa14.91□□□□□ -0.02
CHD7-209ENST00000529472 PTCD1O75127 700 aaKnown RBP14.91□□□□□ -0.02
CHD7-209ENST00000529472 KCNQ4P56696 695 aa14.91□□□□□ -0.02
CHD7-209ENST00000529472 HNRNPUQ00839 825 aaKnown RBP eCLIP14.91□□□□□ -0.02
CHD7-209ENST00000529472 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
CHD7-209ENST00000529472 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
CHD7-209ENST00000529472 TSPYL4Q9UJ04 414 aa14.91□□□□□ -0.02
CHD7-209ENST00000529472 KCPQ6ZWJ8 1503 aa14.91□□□□□ -0.02
CHD7-209ENST00000529472 RREB1Q92766 1687 aa14.9□□□□□ -0.02
CHD7-209ENST00000529472 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
CHD7-209ENST00000529472 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
CHD7-209ENST00000529472 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
CHD7-209ENST00000529472 NGEFQ8N5V2 710 aa14.9□□□□□ -0.02
CHD7-209ENST00000529472 CAMKK2Q96RR4 588 aa14.9□□□□□ -0.02
CHD7-209ENST00000529472 CCNL1Q9UK58 526 aaPredicted RBP14.9□□□□□ -0.02
CHD7-209ENST00000529472 LOC102724428A0A0B4J2F2 783 aa14.89□□□□□ -0.03
CHD7-209ENST00000529472 SIK1P57059 783 aa14.89□□□□□ -0.03
CHD7-209ENST00000529472 PROM2Q8N271 834 aa14.89□□□□□ -0.03
CHD7-209ENST00000529472 NUP188Q5SRE5 1749 aa14.89□□□□□ -0.03
CHD7-209ENST00000529472 CFAP44Q96MT7 982 aa14.88□□□□□ -0.03
CHD7-209ENST00000529472 IFT57Q9NWB7 429 aa14.88□□□□□ -0.03
CHD7-209ENST00000529472 TJP1Q07157 1748 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 ATP6V1AP38606 617 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 GNAI1P63096 354 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 SLC27A3Q5K4L6 730 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 WDR63Q8IWG1 891 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 ZNF496Q96IT1 587 aaPredicted RBP14.87□□□□□ -0.03
CHD7-209ENST00000529472 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 LRRC4BQ9NT99 713 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 ZNF521Q96K83 1311 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 C5P01031 1676 aa14.87□□□□□ -0.03
CHD7-209ENST00000529472 CHL1O00533 1208 aa14.86□□□□□ -0.03
CHD7-209ENST00000529472 TSR2Q969E8 191 aaKnown RBP14.86□□□□□ -0.03
CHD7-209ENST00000529472 MBIPQ9NS73 344 aa14.86□□□□□ -0.03
CHD7-209ENST00000529472 BABAM1Q9NWV8 329 aa14.86□□□□□ -0.03
CHD7-209ENST00000529472 TAF1LQ8IZX4 1826 aa14.86□□□□□ -0.03
CHD7-209ENST00000529472 ZNF831Q5JPB2 1677 aa14.86□□□□□ -0.03
CHD7-209ENST00000529472 IL16Q14005 1332 aa14.86□□□□□ -0.03
CHD7-209ENST00000529472 ZNF853P0CG23 659 aa14.85□□□□□ -0.03
CHD7-209ENST00000529472 ITPK1Q13572 414 aa14.85□□□□□ -0.03
CHD7-209ENST00000529472 HEG1Q9ULI3 1381 aa14.85□□□□□ -0.03
CHD7-209ENST00000529472 COL5A3P25940 1745 aaPredicted RBP14.84□□□□□ -0.03
CHD7-209ENST00000529472 EIF4A1P60842 406 aaKnown RBP14.84□□□□□ -0.03
CHD7-209ENST00000529472 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
CHD7-209ENST00000529472 C4BP0C0L5 1744 aa14.83□□□□□ -0.03
CHD7-209ENST00000529472 PRAMEF22A3QJZ6 481 aa14.83□□□□□ -0.04
CHD7-209ENST00000529472 DNAJC10Q8IXB1 793 aa14.83□□□□□ -0.04
CHD7-209ENST00000529472 LINC00116Q8NCU8 138 aa14.83□□□□□ -0.04
CHD7-209ENST00000529472 YTHDC1Q96MU7 727 aaKnown RBP14.83□□□□□ -0.04
CHD7-209ENST00000529472 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
CHD7-209ENST00000529472 GOLGA2Q08379 1002 aa14.82□□□□□ -0.04
CHD7-209ENST00000529472 KRT24Q2M2I5 525 aa14.82□□□□□ -0.04
CHD7-209ENST00000529472 VSIG10Q8N0Z9 540 aa14.82□□□□□ -0.04
CHD7-209ENST00000529472 FANCIQ9NVI1 1328 aa14.82□□□□□ -0.04
CHD7-209ENST00000529472 LAMB4A4D0S4 1761 aa14.82□□□□□ -0.04
CHD7-209ENST00000529472 SNRPA1P09661 255 aaKnown RBP14.81□□□□□ -0.04
CHD7-209ENST00000529472 MYH16Q9H6N6 1097 aa14.81□□□□□ -0.04
CHD7-209ENST00000529472 ANO8Q9HCE9 1232 aaPredicted RBP14.81□□□□□ -0.04
CHD7-209ENST00000529472 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
CHD7-209ENST00000529472 E9PSI1 815 aa14.8□□□□□ -0.04
CHD7-209ENST00000529472 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
CHD7-209ENST00000529472 CDCA7LQ96GN5 454 aa14.8□□□□□ -0.04
CHD7-209ENST00000529472 AK7Q96M32 723 aa14.8□□□□□ -0.04
CHD7-209ENST00000529472 TUBGCP6Q96RT7 1819 aa14.8□□□□□ -0.04
CHD7-209ENST00000529472 GIGYF1O75420 1035 aaPredicted RBP14.79□□□□□ -0.04
CHD7-209ENST00000529472 STARD3NLO95772 234 aa14.79□□□□□ -0.04
CHD7-209ENST00000529472 CYP19A1P11511 503 aaPredicted RBP14.79□□□□□ -0.04
CHD7-209ENST00000529472 CRKLP46109 303 aaKnown RBP14.79□□□□□ -0.04
CHD7-209ENST00000529472 TEX13AQ9BXU3 409 aaPredicted RBP14.79□□□□□ -0.04
CHD7-209ENST00000529472 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
CHD7-209ENST00000529472 SRCAPQ6ZRS2 3230 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms