RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 RTCBQ9Y3I0 505 aaKnown RBP20.46■□□□□ 0.87
BEST1-203ENST00000524877 SLC5A1P13866 664 aa20.46■□□□□ 0.87
BEST1-203ENST00000524877 DNAAF4Q8WXU2 420 aa20.46■□□□□ 0.87
BEST1-203ENST00000524877 SLC4A3P48751 1232 aa20.46■□□□□ 0.87
BEST1-203ENST00000524877 ASXL1Q8IXJ9 1541 aa20.46■□□□□ 0.87
BEST1-203ENST00000524877 LTKP29376 864 aa20.46■□□□□ 0.87
BEST1-203ENST00000524877 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
BEST1-203ENST00000524877 PREX2Q70Z35 1606 aa20.46■□□□□ 0.87
BEST1-203ENST00000524877 CWC25Q9NXE8 425 aaPredicted RBP20.46■□□□□ 0.87
BEST1-203ENST00000524877 BCAR3O75815 825 aa20.45■□□□□ 0.86
BEST1-203ENST00000524877 CREBRFQ8IUR6 639 aa20.45■□□□□ 0.86
BEST1-203ENST00000524877 SLF2Q8IX21 1173 aa20.45■□□□□ 0.86
BEST1-203ENST00000524877 C6orf229H3BNL8 230 aa20.44■□□□□ 0.86
BEST1-203ENST00000524877 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
BEST1-203ENST00000524877 PAXIP1Q6ZW49 1069 aaPredicted RBP20.44■□□□□ 0.86
BEST1-203ENST00000524877 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
BEST1-203ENST00000524877 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
BEST1-203ENST00000524877 PZPP20742 1482 aa20.44■□□□□ 0.86
BEST1-203ENST00000524877 HOXC9P31274 260 aa20.44■□□□□ 0.86
BEST1-203ENST00000524877 MVPQ14764 893 aaKnown RBP20.44■□□□□ 0.86
BEST1-203ENST00000524877 TTLL12Q14166 644 aaPredicted RBP20.43■□□□□ 0.86
BEST1-203ENST00000524877 SPINK5Q9NQ38 1064 aaPredicted RBP20.43■□□□□ 0.86
BEST1-203ENST00000524877 COL17A1Q9UMD9 1497 aaPredicted RBP20.43■□□□□ 0.86
BEST1-203ENST00000524877 TPD52L1Q16890 204 aaPredicted RBP20.43■□□□□ 0.86
BEST1-203ENST00000524877 ZFYVE9O95405 1425 aa20.43■□□□□ 0.86
BEST1-203ENST00000524877 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
BEST1-203ENST00000524877 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
BEST1-203ENST00000524877 PIK3C2GO75747 1445 aa20.43■□□□□ 0.86
BEST1-203ENST00000524877 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
BEST1-203ENST00000524877 ZRANB1Q9UGI0 708 aa20.42■□□□□ 0.86
BEST1-203ENST00000524877 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
BEST1-203ENST00000524877 DCAF5Q96JK2 942 aa20.42■□□□□ 0.86
BEST1-203ENST00000524877 TPM2P07951 284 aa20.42■□□□□ 0.86
BEST1-203ENST00000524877 SLFN5Q08AF3 891 aa20.42■□□□□ 0.86
BEST1-203ENST00000524877 RPAP2Q8IXW5 612 aaPredicted RBP20.41■□□□□ 0.86
BEST1-203ENST00000524877 BAG6P46379 1132 aa20.41■□□□□ 0.86
BEST1-203ENST00000524877 SIRT1Q96EB6 747 aa20.41■□□□□ 0.86
BEST1-203ENST00000524877 ZNF772Q68DY9 489 aaPredicted RBP20.41■□□□□ 0.86
BEST1-203ENST00000524877 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
BEST1-203ENST00000524877 DZIP1Q86YF9 867 aaKnown RBP20.4■□□□□ 0.86
BEST1-203ENST00000524877 ABCF2Q9UG63 623 aa20.4■□□□□ 0.86
BEST1-203ENST00000524877 CCDC152Q4G0S7 254 aa20.4■□□□□ 0.86
BEST1-203ENST00000524877 IPO9Q96P70 1041 aaKnown RBP20.4■□□□□ 0.86
BEST1-203ENST00000524877 RIMBP3CA6NJZ7 1639 aa20.4■□□□□ 0.86
BEST1-203ENST00000524877 RIMBP3BA6NNM3 1639 aa20.4■□□□□ 0.86
BEST1-203ENST00000524877 RIMBP3Q9UFD9 1639 aa20.4■□□□□ 0.86
BEST1-203ENST00000524877 FBLN1P23142 703 aa20.4■□□□□ 0.86
BEST1-203ENST00000524877 PIK3R4Q99570 1358 aa20.4■□□□□ 0.86
BEST1-203ENST00000524877 TDO2P48775 406 aa20.4■□□□□ 0.86
BEST1-203ENST00000524877 PTPRCP08575 1304 aa20.39■□□□□ 0.85
BEST1-203ENST00000524877 ZNF287Q9HBT7 754 aa20.39■□□□□ 0.85
BEST1-203ENST00000524877 A0A1W2PP64 1363 aa20.39■□□□□ 0.85
BEST1-203ENST00000524877 EDC4Q6P2E9 1401 aaKnown RBP20.39■□□□□ 0.85
BEST1-203ENST00000524877 RAB11FIP3O75154 756 aa20.38■□□□□ 0.85
BEST1-203ENST00000524877 IDH1O75874 414 aaKnown RBP20.38■□□□□ 0.85
BEST1-203ENST00000524877 GOLGA6L1Q8N7Z2 621 aa20.38■□□□□ 0.85
BEST1-203ENST00000524877 SMC3Q9UQE7 1217 aa20.38■□□□□ 0.85
BEST1-203ENST00000524877 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
BEST1-203ENST00000524877 CRACR2BQ8N4Y2 399 aaPredicted RBP20.38■□□□□ 0.85
BEST1-203ENST00000524877 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
BEST1-203ENST00000524877 USP5P45974 858 aa20.37■□□□□ 0.85
BEST1-203ENST00000524877 C16orf71Q8IYS4 520 aaPredicted RBP20.37■□□□□ 0.85
BEST1-203ENST00000524877 HOOK1Q9UJC3 728 aaKnown RBP20.37■□□□□ 0.85
BEST1-203ENST00000524877 CCNL1Q9UK58 526 aaPredicted RBP20.37■□□□□ 0.85
BEST1-203ENST00000524877 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
BEST1-203ENST00000524877 TRAPPC3LQ5T215 181 aa20.36■□□□□ 0.85
BEST1-203ENST00000524877 FLIIQ13045 1269 aa20.36■□□□□ 0.85
BEST1-203ENST00000524877 KDM5CP41229 1560 aa20.36■□□□□ 0.85
BEST1-203ENST00000524877 GSE1Q14687 1217 aa20.36■□□□□ 0.85
BEST1-203ENST00000524877 CTNNA3Q9UI47 895 aa20.36■□□□□ 0.85
BEST1-203ENST00000524877 PDE4AP27815 886 aa20.35■□□□□ 0.85
BEST1-203ENST00000524877 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
BEST1-203ENST00000524877 STK11IPQ8N1F8 1099 aa20.35■□□□□ 0.85
BEST1-203ENST00000524877 POLKQ9UBT6 870 aa20.35■□□□□ 0.85
BEST1-203ENST00000524877 MPHOSPH10O00566 681 aaKnown RBP20.35■□□□□ 0.85
BEST1-203ENST00000524877 MBD5Q9P267 1494 aa20.35■□□□□ 0.85
BEST1-203ENST00000524877 MAP3K5Q99683 1374 aa20.35■□□□□ 0.85
BEST1-203ENST00000524877 CCDC69A6NI79 296 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 DZIP3Q86Y13 1208 aaKnown RBP20.34■□□□□ 0.85
BEST1-203ENST00000524877 FAM83GA6ND36 823 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 SLC39A6Q13433 755 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 ERVK-7P63135 1459 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 IL16Q14005 1332 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 ANKRD13DQ6ZTN6 518 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 KIF1BPQ96EK5 621 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 UTP14AQ9BVJ6 771 aaKnown RBP20.34■□□□□ 0.85
BEST1-203ENST00000524877 TRPC5Q9UL62 973 aaPredicted RBP20.34■□□□□ 0.85
BEST1-203ENST00000524877 NIP7Q9Y221 180 aaKnown RBP eCLIP20.34■□□□□ 0.85
BEST1-203ENST00000524877 SBNO1A3KN83 1393 aa20.34■□□□□ 0.85
BEST1-203ENST00000524877 POLR3DP05423 398 aaPredicted RBP20.34■□□□□ 0.85
BEST1-203ENST00000524877 MYO1BO43795 1136 aa20.33■□□□□ 0.85
BEST1-203ENST00000524877 PES1O00541 588 aaKnown RBP20.33■□□□□ 0.85
BEST1-203ENST00000524877 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
BEST1-203ENST00000524877 GNPATO15228 680 aa20.33■□□□□ 0.84
BEST1-203ENST00000524877 FOSBP53539 338 aa20.33■□□□□ 0.84
BEST1-203ENST00000524877 ATP5J2-PTCD1G3V325 749 aa20.33■□□□□ 0.84
BEST1-203ENST00000524877 MAP4K4O95819 1239 aaPredicted RBP20.33■□□□□ 0.84
BEST1-203ENST00000524877 APBA3O96018 575 aa20.33■□□□□ 0.84
BEST1-203ENST00000524877 TPTE2Q6XPS3 522 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms