RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 GABPB1Q06547 395 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-227ENST00000523867 MLECQ14165 292 aa8.95□□□□□ -0.98
HDAC9-227ENST00000523867 IGSF5Q9NSI5 407 aa8.95□□□□□ -0.98
HDAC9-227ENST00000523867 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.95□□□□□ -0.98
HDAC9-227ENST00000523867 ARHGAP31Q2M1Z3 1444 aa8.95□□□□□ -0.98
HDAC9-227ENST00000523867 CCDC66A2RUB6 948 aa8.95□□□□□ -0.98
HDAC9-227ENST00000523867 HOXD11P31277 338 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-227ENST00000523867 DDIT3P35638 169 aa8.95□□□□□ -0.98
HDAC9-227ENST00000523867 FOSBP53539 338 aa8.95□□□□□ -0.98
HDAC9-227ENST00000523867 CBX1P83916 185 aa8.95□□□□□ -0.98
HDAC9-227ENST00000523867 LNPKQ9C0E8 428 aa8.95□□□□□ -0.98
HDAC9-227ENST00000523867 ARHGEF28Q8N1W1 1705 aaKnown RBP8.95□□□□□ -0.98
HDAC9-227ENST00000523867 ABCC3O15438 1527 aa8.94□□□□□ -0.98
HDAC9-227ENST00000523867 CLGNO14967 610 aa8.94□□□□□ -0.98
HDAC9-227ENST00000523867 ALDH1L2Q3SY69 923 aa8.94□□□□□ -0.98
HDAC9-227ENST00000523867 CHD1LQ86WJ1 897 aa8.94□□□□□ -0.98
HDAC9-227ENST00000523867 FEZ1Q99689 392 aa8.94□□□□□ -0.98
HDAC9-227ENST00000523867 CGNQ9P2M7 1197 aaKnown RBP8.94□□□□□ -0.98
HDAC9-227ENST00000523867 COL3A1P02461 1466 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-227ENST00000523867 RIOK3O14730 519 aaKnown RBP8.94□□□□□ -0.98
HDAC9-227ENST00000523867 FOXD4Q12950 439 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-227ENST00000523867 CCDC39Q9UFE4 941 aa8.94□□□□□ -0.98
HDAC9-227ENST00000523867 ATAD2Q6PL18 1390 aa8.94□□□□□ -0.98
HDAC9-227ENST00000523867 PEX14O75381 377 aa8.93□□□□□ -0.98
HDAC9-227ENST00000523867 ZNF445P59923 1031 aa8.93□□□□□ -0.98
HDAC9-227ENST00000523867 XPCQ01831 940 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-227ENST00000523867 AXDND1Q5T1B0 1012 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-227ENST00000523867 SNX21Q969T3 373 aa8.93□□□□□ -0.98
HDAC9-227ENST00000523867 MINK1Q8N4C8 1332 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-227ENST00000523867 NEXMIFQ5QGS0 1516 aa8.93□□□□□ -0.98
HDAC9-227ENST00000523867 BARGINQ6ZT62 677 aa8.93□□□□□ -0.98
HDAC9-227ENST00000523867 HDGFL2Q7Z4V5 671 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-227ENST00000523867 HS6ST3Q8IZP7 471 aa8.93□□□□□ -0.98
HDAC9-227ENST00000523867 FCHSD2O94868 740 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 IDI1Q13907 227 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 MICAL1Q8TDZ2 1067 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 ZNF622Q969S3 477 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC9-227ENST00000523867 PRAM1Q96QH2 718 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 CAMSAP1Q5T5Y3 1602 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 TESPA1A2RU30 521 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-227ENST00000523867 ATP2B3Q16720 1220 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 BMP2KLQ5H9B9 411 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 ANKRD45Q5TZF3 282 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 CLEC17AQ6ZS10 378 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
HDAC9-227ENST00000523867 ANKRD62A6NC57 917 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 RBM26Q5T8P6 1007 aaKnown RBP8.91□□□□□ -0.98
HDAC9-227ENST00000523867 GEMIN8Q9NWZ8 242 aaKnown RBP8.91□□□□□ -0.98
HDAC9-227ENST00000523867 KIF3AQ9Y496 699 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 RPS6KL1Q9Y6S9 549 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 MED14O60244 1454 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 PNPLA6Q8IY17 1366 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 TULP2O00295 520 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 PRKAR2BP31323 418 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 KLHL40Q2TBA0 621 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 GCC1Q96CN9 775 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 TIGD1Q96MW7 591 aa8.91□□□□□ -0.98
HDAC9-227ENST00000523867 ZBTB7BO15156 539 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-227ENST00000523867 RINLQ6ZS11 566 aa8.9□□□□□ -0.98
HDAC9-227ENST00000523867 ZNF771Q7L3S4 317 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-227ENST00000523867 TNPO1Q92973 898 aaKnown RBP8.9□□□□□ -0.98
HDAC9-227ENST00000523867 PIK3C2BO00750 1634 aa8.9□□□□□ -0.98
HDAC9-227ENST00000523867 ZFYVE9O95405 1425 aa8.9□□□□□ -0.98
HDAC9-227ENST00000523867 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
HDAC9-227ENST00000523867 CEBPAP49715 358 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-227ENST00000523867 RAB3GAP1Q15042 981 aa8.9□□□□□ -0.98
HDAC9-227ENST00000523867 OGFRQ9NZT2 677 aa8.9□□□□□ -0.98
HDAC9-227ENST00000523867 GOLGA6L22H0YM25 854 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 KCNJ4P48050 445 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 CDK19Q9BWU1 502 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 EFCC1Q9HA90 598 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 CABP1Q9NZU7 370 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 CD163L1Q9NR16 1453 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 GORABQ5T7V8 394 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 CREBRFQ8IUR6 639 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 ARHGAP45Q92619 1136 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 SH3BP1Q9Y3L3 701 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 PPIP5K1Q6PFW1 1433 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 CPS1P31327 1500 aa8.89□□□□□ -0.99
HDAC9-227ENST00000523867 ZC3H4Q9UPT8 1303 aaKnown RBP8.89□□□□□ -0.99
HDAC9-227ENST00000523867 VAMP4O75379 141 aa8.88□□□□□ -0.99
HDAC9-227ENST00000523867 KIAA2012Q0VF49 1180 aa8.88□□□□□ -0.99
HDAC9-227ENST00000523867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.88□□□□□ -0.99
HDAC9-227ENST00000523867 MRPL50Q8N5N7 158 aaKnown RBP8.88□□□□□ -0.99
HDAC9-227ENST00000523867 CALCOCO1Q9P1Z2 691 aa8.88□□□□□ -0.99
HDAC9-227ENST00000523867 CEP170BQ9Y4F5 1589 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-227ENST00000523867 RAB11FIP3O75154 756 aa8.88□□□□□ -0.99
HDAC9-227ENST00000523867 TBC1D9Q6ZT07 1266 aa8.88□□□□□ -0.99
HDAC9-227ENST00000523867 PDCL2Q8N4E4 241 aa8.88□□□□□ -0.99
HDAC9-227ENST00000523867 KIF2CQ99661 725 aa8.88□□□□□ -0.99
HDAC9-227ENST00000523867 YTHDC2Q9H6S0 1430 aaKnown RBP8.88□□□□□ -0.99
HDAC9-227ENST00000523867 ANKRD26Q9UPS8 1709 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 ELL2O00472 640 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-227ENST00000523867 MAP4K4O95819 1239 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-227ENST00000523867 HMOX1P09601 288 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 GNAI1P63096 354 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 NFE2L2Q16236 605 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 KCNV2Q8TDN2 545 aa8.87□□□□□ -0.99
HDAC9-227ENST00000523867 THUMPD2Q9BTF0 503 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms