RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 GTF2IP78347 998 aa6.05□□□□□ -1.44
HMGN1P28-201ENST00000521340 CCDC27Q2M243 656 aa6.05□□□□□ -1.44
HMGN1P28-201ENST00000521340 NPAS3Q8IXF0 933 aa6.05□□□□□ -1.44
HMGN1P28-201ENST00000521340 SLC16A10Q8TF71 515 aa6.05□□□□□ -1.44
HMGN1P28-201ENST00000521340 ITPKCQ96DU7 683 aa6.05□□□□□ -1.44
HMGN1P28-201ENST00000521340 AMOTL2Q9Y2J4 779 aa6.05□□□□□ -1.44
HMGN1P28-201ENST00000521340 SOWAHDA6NJG2 315 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 SFI1A8K8P3 1242 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 WEE1P30291 646 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 SCTRP47872 440 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 SERPINB4P48594 390 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 ATP1A2P50993 1020 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 NR5A1Q13285 461 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 AGERQ15109 404 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 CCDC102BQ68D86 513 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 B4GALNT3Q6L9W6 998 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 CXXC1Q9P0U4 656 aaPredicted RBP6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 MAP4K5Q9Y4K4 846 aa6.04□□□□□ -1.44
HMGN1P28-201ENST00000521340 M0R2N6 131 aa6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 SEC13P55735 322 aa6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 SCARF1Q14162 830 aa6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 OXLD1Q5BKU9 147 aa6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 INTS6LQ5JSJ4 861 aaKnown RBP6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 RNF20Q5VTR2 975 aa6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 CAPN12Q6ZSI9 719 aa6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 CCDC125Q86Z20 511 aa6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 CCER1Q8TC90 406 aaPredicted RBP6.03□□□□□ -1.44
HMGN1P28-201ENST00000521340 TMEM229AB2RXF0 380 aa6.02□□□□□ -1.45
HMGN1P28-201ENST00000521340 USP4Q13107 963 aa6.02□□□□□ -1.45
HMGN1P28-201ENST00000521340 TPCN2Q8NHX9 752 aa6.02□□□□□ -1.45
HMGN1P28-201ENST00000521340 IRF7Q92985 503 aa6.02□□□□□ -1.45
HMGN1P28-201ENST00000521340 KCTD15Q96SI1 283 aaPredicted RBP6.02□□□□□ -1.45
HMGN1P28-201ENST00000521340 UNCXA6NJT0 531 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 ERVH48-1M5A8F1 160 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 SCNN1DP51172 638 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 EPHA4P54764 986 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 ERVK-9P63128 1117 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 NBPF20Q3BBV1 942 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 C6orf118Q5T5N4 469 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 SLC10A4Q96EP9 437 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 PRIMPOLQ96LW4 560 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 OSBPL3Q9H4L5 887 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 CDV3Q9UKY7 258 aaKnown RBP6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 PCDHB11Q9Y5F2 797 aa6.01□□□□□ -1.45
HMGN1P28-201ENST00000521340 PRMT3O60678 531 aa6□□□□□ -1.45
HMGN1P28-201ENST00000521340 LILRA1O75019 489 aa6□□□□□ -1.45
HMGN1P28-201ENST00000521340 RANGAP1P46060 587 aaPredicted RBP6□□□□□ -1.45
HMGN1P28-201ENST00000521340 IGSF5Q9NSI5 407 aa6□□□□□ -1.45
HMGN1P28-201ENST00000521340 RBM47A0AV96 593 aaKnown RBP5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 WASLO00401 505 aaPredicted RBP5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 C21orf2O43822 256 aa5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 LGR5O75473 907 aa5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 STAU1O95793 577 aaKnown RBP5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 FSHRP23945 695 aa5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 MEIOBQ8N635 442 aa5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 TSEN2Q8NCE0 465 aaKnown RBP5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 EGFL7Q9UHF1 273 aa5.99□□□□□ -1.45
HMGN1P28-201ENST00000521340 BMP2P12643 396 aa5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 FKBP5Q13451 457 aaPredicted RBP5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 VASH1Q7L8A9 365 aaPredicted RBP5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 LINC00528Q8N1L1 170 aa5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 KDF1Q8NAX2 398 aaPredicted RBP5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 ZSCAN1Q8NBB4 408 aa5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 GAS2L2Q8NHY3 880 aa5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 SLC4A9Q96Q91 983 aa5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 ZNF358Q9NW07 568 aa5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 SEPT3Q9UH03 358 aa5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 SOS2Q07890 1332 aaPredicted RBP5.98□□□□□ -1.45
HMGN1P28-201ENST00000521340 MAN1A2O60476 641 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 ICMTO60725 284 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 VSIG8P0DPA2 414 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 NPR3P17342 541 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 ADD1P35611 737 aaKnown RBP5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 ARHGAP4P98171 946 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 POTEAQ6S8J7 498 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 SIRT1Q96EB6 747 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 TMPRSS4Q9NRS4 437 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 DNMT3LQ9UJW3 386 aa5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 DNMT3AQ9Y6K1 912 aaPredicted RBP5.97□□□□□ -1.45
HMGN1P28-201ENST00000521340 PPFIA3O75145 1194 aa5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 RBM25P49756 843 aaKnown RBP5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 FOXK2Q01167 660 aa5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 NPAS4Q8IUM7 802 aa5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 CCDC116Q8IYX3 515 aa5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 ZNF295-AS1Q8N0V1 137 aa5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 COL26A1Q96A83 441 aa5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 HRH3Q9Y5N1 445 aa5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 EMILIN1Q9Y6C2 1016 aa5.96□□□□□ -1.46
HMGN1P28-201ENST00000521340 CBLBQ13191 982 aa5.95□□□□□ -1.46
HMGN1P28-201ENST00000521340 PPP1R26Q5T8A7 1209 aaPredicted RBP5.95□□□□□ -1.46
HMGN1P28-201ENST00000521340 CC2D2BQ6DHV5 1058 aa5.95□□□□□ -1.46
HMGN1P28-201ENST00000521340 GTF3C2Q8WUA4 911 aaPredicted RBP5.95□□□□□ -1.46
HMGN1P28-201ENST00000521340 ETNK1Q9HBU6 452 aa5.95□□□□□ -1.46
HMGN1P28-201ENST00000521340 KIAA1522Q9P206 1035 aaPredicted RBP5.95□□□□□ -1.46
HMGN1P28-201ENST00000521340 UPP2O95045 317 aa5.94□□□□□ -1.46
HMGN1P28-201ENST00000521340 INHAP05111 366 aa5.94□□□□□ -1.46
HMGN1P28-201ENST00000521340 IGFBP4P22692 258 aa5.94□□□□□ -1.46
HMGN1P28-201ENST00000521340 Q6ZVU0 165 aa5.94□□□□□ -1.46
HMGN1P28-201ENST00000521340 TSEN34Q9BSV6 310 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms