RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 PAPPAQ13219 1627 aa15.69■□□□□ 0.1
SNF8-215ENST00000515572 TEFQ10587 303 aa15.69■□□□□ 0.1
SNF8-215ENST00000515572 MIER1Q8N108 512 aa15.69■□□□□ 0.1
SNF8-215ENST00000515572 NFATC2IPQ8NCF5 419 aa15.69■□□□□ 0.1
SNF8-215ENST00000515572 IL17REQ8NFR9 667 aa15.69■□□□□ 0.1
SNF8-215ENST00000515572 NUP188Q5SRE5 1749 aa15.68■□□□□ 0.1
SNF8-215ENST00000515572 ZNF831Q5JPB2 1677 aa15.68■□□□□ 0.1
SNF8-215ENST00000515572 RIPK4P57078 832 aa15.68■□□□□ 0.1
SNF8-215ENST00000515572 PALLDQ8WX93 1383 aa15.67■□□□□ 0.1
SNF8-215ENST00000515572 HMGB2P26583 209 aaKnown RBP15.67■□□□□ 0.1
SNF8-215ENST00000515572 EZH2Q15910 746 aaKnown RBP15.67■□□□□ 0.1
SNF8-215ENST00000515572 FAM9BQ8IZU0 186 aa15.67■□□□□ 0.1
SNF8-215ENST00000515572 TXNRD1Q16881 649 aa15.66■□□□□ 0.1
SNF8-215ENST00000515572 SLC27A3Q5K4L6 730 aa15.66■□□□□ 0.1
SNF8-215ENST00000515572 MCM10Q7L590 875 aa15.66■□□□□ 0.1
SNF8-215ENST00000515572 ATG3Q9NT62 314 aa15.66■□□□□ 0.1
SNF8-215ENST00000515572 UBR2Q8IWV8 1755 aa15.65■□□□□ 0.1
SNF8-215ENST00000515572 APAF1O14727 1248 aa15.65■□□□□ 0.1
SNF8-215ENST00000515572 ASAP1Q9ULH1 1129 aa15.65■□□□□ 0.1
SNF8-215ENST00000515572 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
SNF8-215ENST00000515572 DCTN1Q14203 1278 aa15.64■□□□□ 0.09
SNF8-215ENST00000515572 NEUROD2Q15784 382 aa15.64■□□□□ 0.09
SNF8-215ENST00000515572 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
SNF8-215ENST00000515572 PROM2Q8N271 834 aa15.64■□□□□ 0.09
SNF8-215ENST00000515572 RRP7AQ9Y3A4 280 aaKnown RBP15.64■□□□□ 0.09
SNF8-215ENST00000515572 C5P01031 1676 aa15.63■□□□□ 0.09
SNF8-215ENST00000515572 CCNL1Q9UK58 526 aaPredicted RBP15.63■□□□□ 0.09
SNF8-215ENST00000515572 CICQ96RK0 1608 aaPredicted RBP15.63■□□□□ 0.09
SNF8-215ENST00000515572 TAF7Q15545 349 aaPredicted RBP15.62■□□□□ 0.09
SNF8-215ENST00000515572 NGEFQ8N5V2 710 aa15.62■□□□□ 0.09
SNF8-215ENST00000515572 TRIM35Q9UPQ4 493 aa15.62■□□□□ 0.09
SNF8-215ENST00000515572 KDM3BQ7LBC6 1761 aa15.62■□□□□ 0.09
SNF8-215ENST00000515572 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
SNF8-215ENST00000515572 SIK1P57059 783 aa15.61■□□□□ 0.09
SNF8-215ENST00000515572 TTC5Q8N0Z6 440 aa15.61■□□□□ 0.09
SNF8-215ENST00000515572 KCPQ6ZWJ8 1503 aa15.6■□□□□ 0.09
SNF8-215ENST00000515572 BTBD11A6QL63 1104 aa15.6■□□□□ 0.09
SNF8-215ENST00000515572 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
SNF8-215ENST00000515572 CCDC27Q2M243 656 aa15.6■□□□□ 0.09
SNF8-215ENST00000515572 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
SNF8-215ENST00000515572 ZNF790Q6PG37 636 aa15.6■□□□□ 0.09
SNF8-215ENST00000515572 THUMPD2Q9BTF0 503 aaKnown RBP15.6■□□□□ 0.09
SNF8-215ENST00000515572 COL5A3P25940 1745 aaPredicted RBP15.6■□□□□ 0.09
SNF8-215ENST00000515572 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
SNF8-215ENST00000515572 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
SNF8-215ENST00000515572 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
SNF8-215ENST00000515572 BABAM1Q9NWV8 329 aa15.59■□□□□ 0.09
SNF8-215ENST00000515572 C4BP0C0L5 1744 aa15.58■□□□□ 0.08
SNF8-215ENST00000515572 TJP1Q07157 1748 aa15.58■□□□□ 0.08
SNF8-215ENST00000515572 QSER1Q2KHR3 1735 aa15.58■□□□□ 0.08
SNF8-215ENST00000515572 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
SNF8-215ENST00000515572 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
SNF8-215ENST00000515572 VSIG10Q8N0Z9 540 aa15.57■□□□□ 0.08
SNF8-215ENST00000515572 KCNQ4P56696 695 aa15.56■□□□□ 0.08
SNF8-215ENST00000515572 FMNL2Q96PY5 1086 aa15.56■□□□□ 0.08
SNF8-215ENST00000515572 STK32BQ9NY57 414 aa15.56■□□□□ 0.08
SNF8-215ENST00000515572 HEG1Q9ULI3 1381 aa15.55■□□□□ 0.08
SNF8-215ENST00000515572 ITPK1Q13572 414 aa15.55■□□□□ 0.08
SNF8-215ENST00000515572 WWC1Q8IX03 1113 aa15.55■□□□□ 0.08
SNF8-215ENST00000515572 ZNF496Q96IT1 587 aaPredicted RBP15.55■□□□□ 0.08
SNF8-215ENST00000515572 SLC4A9Q96Q91 983 aa15.55■□□□□ 0.08
SNF8-215ENST00000515572 CFAP44Q96MT7 982 aa15.54■□□□□ 0.08
SNF8-215ENST00000515572 TEX13AQ9BXU3 409 aaPredicted RBP15.54■□□□□ 0.08
SNF8-215ENST00000515572 TSPYL4Q9UJ04 414 aa15.54■□□□□ 0.08
SNF8-215ENST00000515572 TUBGCP6Q96RT7 1819 aa15.54■□□□□ 0.08
SNF8-215ENST00000515572 LAMB4A4D0S4 1761 aa15.54■□□□□ 0.08
SNF8-215ENST00000515572 UBR3Q6ZT12 1888 aa15.53■□□□□ 0.08
SNF8-215ENST00000515572 CHL1O00533 1208 aa15.53■□□□□ 0.08
SNF8-215ENST00000515572 KCNQ3O43525 872 aa15.53■□□□□ 0.08
SNF8-215ENST00000515572 SLC15A2Q16348 729 aa15.53■□□□□ 0.08
SNF8-215ENST00000515572 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
SNF8-215ENST00000515572 ANO8Q9HCE9 1232 aaPredicted RBP15.53■□□□□ 0.08
SNF8-215ENST00000515572 IFT57Q9NWB7 429 aa15.53■□□□□ 0.08
SNF8-215ENST00000515572 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
SNF8-215ENST00000515572 IL16Q14005 1332 aa15.52■□□□□ 0.08
SNF8-215ENST00000515572 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.08
SNF8-215ENST00000515572 GNAI1P63096 354 aa15.52■□□□□ 0.08
SNF8-215ENST00000515572 WDR63Q8IWG1 891 aa15.52■□□□□ 0.08
SNF8-215ENST00000515572 LINC00116Q8NCU8 138 aa15.52■□□□□ 0.08
SNF8-215ENST00000515572 MYH14Q7Z406 1995 aaKnown RBP15.51■□□□□ 0.07
SNF8-215ENST00000515572 SENP3-EIF4A1A0A087X0R7 540 aa15.51■□□□□ 0.07
SNF8-215ENST00000515572 STARD3NLO95772 234 aa15.51■□□□□ 0.07
SNF8-215ENST00000515572 SNRPA1P09661 255 aaKnown RBP15.51■□□□□ 0.07
SNF8-215ENST00000515572 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
SNF8-215ENST00000515572 ZNF827Q17R98 1081 aa15.51■□□□□ 0.07
SNF8-215ENST00000515572 RC3H1Q5TC82 1133 aaKnown RBP15.51■□□□□ 0.07
SNF8-215ENST00000515572 DNAJC10Q8IXB1 793 aa15.51■□□□□ 0.07
SNF8-215ENST00000515572 AK7Q96M32 723 aa15.51■□□□□ 0.07
SNF8-215ENST00000515572 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
SNF8-215ENST00000515572 EIF4A1P60842 406 aaKnown RBP15.5■□□□□ 0.07
SNF8-215ENST00000515572 R3HDM1Q15032 1099 aaKnown RBP15.5■□□□□ 0.07
SNF8-215ENST00000515572 TFCP2L1Q9NZI6 479 aa15.5■□□□□ 0.07
SNF8-215ENST00000515572 SALL2Q9Y467 1007 aaPredicted RBP15.5■□□□□ 0.07
SNF8-215ENST00000515572 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
SNF8-215ENST00000515572 CYP19A1P11511 503 aaPredicted RBP15.49■□□□□ 0.07
SNF8-215ENST00000515572 FLAD1Q8NFF5 587 aa15.49■□□□□ 0.07
SNF8-215ENST00000515572 ZNF521Q96K83 1311 aa15.48■□□□□ 0.07
SNF8-215ENST00000515572 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
SNF8-215ENST00000515572 CRKLP46109 303 aaKnown RBP15.48■□□□□ 0.07
SNF8-215ENST00000515572 MBIPQ9NS73 344 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms