RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 PALLDQ8WX93 1383 aa12.47□□□□□ -0.41
PDGFC-209ENST00000513664 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
PDGFC-209ENST00000513664 RIPK4P57078 832 aa12.47□□□□□ -0.41
PDGFC-209ENST00000513664 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
PDGFC-209ENST00000513664 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
PDGFC-209ENST00000513664 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
PDGFC-209ENST00000513664 LY75O60449 1722 aa12.46□□□□□ -0.41
PDGFC-209ENST00000513664 NCBP3Q53F19 620 aaKnown RBP12.46□□□□□ -0.41
PDGFC-209ENST00000513664 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.42
PDGFC-209ENST00000513664 ATG3Q9NT62 314 aa12.45□□□□□ -0.42
PDGFC-209ENST00000513664 CCNL1Q9UK58 526 aaPredicted RBP12.45□□□□□ -0.42
PDGFC-209ENST00000513664 ASAP1Q9ULH1 1129 aa12.45□□□□□ -0.42
PDGFC-209ENST00000513664 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
PDGFC-209ENST00000513664 MCM10Q7L590 875 aa12.44□□□□□ -0.42
PDGFC-209ENST00000513664 TTC5Q8N0Z6 440 aa12.44□□□□□ -0.42
PDGFC-209ENST00000513664 PROM2Q8N271 834 aa12.44□□□□□ -0.42
PDGFC-209ENST00000513664 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
PDGFC-209ENST00000513664 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
PDGFC-209ENST00000513664 ZNF831Q5JPB2 1677 aa12.44□□□□□ -0.42
PDGFC-209ENST00000513664 SIPA1L3O60292 1781 aaPredicted RBP12.43□□□□□ -0.42
PDGFC-209ENST00000513664 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
PDGFC-209ENST00000513664 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
PDGFC-209ENST00000513664 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
PDGFC-209ENST00000513664 APAF1O14727 1248 aa12.43□□□□□ -0.42
PDGFC-209ENST00000513664 SIK1P57059 783 aa12.43□□□□□ -0.42
PDGFC-209ENST00000513664 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
PDGFC-209ENST00000513664 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
PDGFC-209ENST00000513664 BABAM1Q9NWV8 329 aa12.43□□□□□ -0.42
PDGFC-209ENST00000513664 PAPPAQ13219 1627 aa12.43□□□□□ -0.42
PDGFC-209ENST00000513664 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
PDGFC-209ENST00000513664 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
PDGFC-209ENST00000513664 ZNF790Q6PG37 636 aa12.42□□□□□ -0.42
PDGFC-209ENST00000513664 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
PDGFC-209ENST00000513664 MIER1Q8N108 512 aa12.42□□□□□ -0.42
PDGFC-209ENST00000513664 ATP6V1AP38606 617 aa12.41□□□□□ -0.42
PDGFC-209ENST00000513664 CCDC27Q2M243 656 aa12.41□□□□□ -0.42
PDGFC-209ENST00000513664 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
PDGFC-209ENST00000513664 LRRC4BQ9NT99 713 aa12.41□□□□□ -0.42
PDGFC-209ENST00000513664 STK32BQ9NY57 414 aa12.41□□□□□ -0.42
PDGFC-209ENST00000513664 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
PDGFC-209ENST00000513664 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
PDGFC-209ENST00000513664 FMNL2Q96PY5 1086 aa12.4□□□□□ -0.42
PDGFC-209ENST00000513664 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
PDGFC-209ENST00000513664 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
PDGFC-209ENST00000513664 C5P01031 1676 aa12.4□□□□□ -0.42
PDGFC-209ENST00000513664 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
PDGFC-209ENST00000513664 UBR2Q8IWV8 1755 aa12.39□□□□□ -0.43
PDGFC-209ENST00000513664 SLC15A2Q16348 729 aa12.39□□□□□ -0.43
PDGFC-209ENST00000513664 KCPQ6ZWJ8 1503 aa12.38□□□□□ -0.43
PDGFC-209ENST00000513664 SLC39A6Q13433 755 aa12.38□□□□□ -0.43
PDGFC-209ENST00000513664 STARD3NLO95772 234 aa12.37□□□□□ -0.43
PDGFC-209ENST00000513664 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
PDGFC-209ENST00000513664 FLAD1Q8NFF5 587 aa12.37□□□□□ -0.43
PDGFC-209ENST00000513664 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
PDGFC-209ENST00000513664 AK7Q96M32 723 aa12.37□□□□□ -0.43
PDGFC-209ENST00000513664 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
PDGFC-209ENST00000513664 TSPYL4Q9UJ04 414 aa12.37□□□□□ -0.43
PDGFC-209ENST00000513664 HEG1Q9ULI3 1381 aa12.37□□□□□ -0.43
PDGFC-209ENST00000513664 TAF1LQ8IZX4 1826 aa12.37□□□□□ -0.43
PDGFC-209ENST00000513664 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
PDGFC-209ENST00000513664 GNAI1P63096 354 aa12.36□□□□□ -0.43
PDGFC-209ENST00000513664 ITPK1Q13572 414 aa12.36□□□□□ -0.43
PDGFC-209ENST00000513664 R3HDM1Q15032 1099 aaKnown RBP12.36□□□□□ -0.43
PDGFC-209ENST00000513664 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
PDGFC-209ENST00000513664 ZNF496Q96IT1 587 aaPredicted RBP12.36□□□□□ -0.43
PDGFC-209ENST00000513664 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
PDGFC-209ENST00000513664 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
PDGFC-209ENST00000513664 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
PDGFC-209ENST00000513664 IL16Q14005 1332 aa12.36□□□□□ -0.43
PDGFC-209ENST00000513664 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
PDGFC-209ENST00000513664 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
PDGFC-209ENST00000513664 COL5A3P25940 1745 aaPredicted RBP12.35□□□□□ -0.43
PDGFC-209ENST00000513664 QSER1Q2KHR3 1735 aa12.35□□□□□ -0.43
PDGFC-209ENST00000513664 CHL1O00533 1208 aa12.35□□□□□ -0.43
PDGFC-209ENST00000513664 SNRPA1P09661 255 aaKnown RBP12.35□□□□□ -0.43
PDGFC-209ENST00000513664 KCNQ4P56696 695 aa12.35□□□□□ -0.43
PDGFC-209ENST00000513664 WDR63Q8IWG1 891 aa12.35□□□□□ -0.43
PDGFC-209ENST00000513664 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
PDGFC-209ENST00000513664 SLC4A9Q96Q91 983 aa12.35□□□□□ -0.43
PDGFC-209ENST00000513664 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
PDGFC-209ENST00000513664 TJP1Q07157 1748 aa12.34□□□□□ -0.43
PDGFC-209ENST00000513664 SSFA2P28290 1259 aa12.34□□□□□ -0.43
PDGFC-209ENST00000513664 MIS18AQ9NYP9 233 aa12.34□□□□□ -0.43
PDGFC-209ENST00000513664 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
PDGFC-209ENST00000513664 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.44
PDGFC-209ENST00000513664 ADRA2BP18089 450 aa12.33□□□□□ -0.44
PDGFC-209ENST00000513664 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
PDGFC-209ENST00000513664 ZNF827Q17R98 1081 aa12.33□□□□□ -0.44
PDGFC-209ENST00000513664 DNAJC10Q8IXB1 793 aa12.33□□□□□ -0.44
PDGFC-209ENST00000513664 SLC16A10Q8TF71 515 aa12.33□□□□□ -0.44
PDGFC-209ENST00000513664 CHMP4AQ9BY43 222 aa12.33□□□□□ -0.44
PDGFC-209ENST00000513664 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
PDGFC-209ENST00000513664 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
PDGFC-209ENST00000513664 GNPATO15228 680 aa12.32□□□□□ -0.44
PDGFC-209ENST00000513664 KCNQ3O43525 872 aa12.32□□□□□ -0.44
PDGFC-209ENST00000513664 RPS6KA4O75676 772 aa12.32□□□□□ -0.44
PDGFC-209ENST00000513664 ZNF853P0CG23 659 aa12.32□□□□□ -0.44
PDGFC-209ENST00000513664 CRKLP46109 303 aaKnown RBP12.32□□□□□ -0.44
PDGFC-209ENST00000513664 CCDC87Q9NVE4 849 aa12.32□□□□□ -0.44
PDGFC-209ENST00000513664 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms