RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 UHRF1BP1Q6BDS2 1440 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 ARHGEF5Q12774 1597 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 CENPHQ9H3R5 247 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 SPINK5Q9NQ38 1064 aaPredicted RBP6.79□□□□□ -1.32
USP38-203ENST00000511739 WDR7Q9Y4E6 1490 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 PDE4AP27815 886 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 MPHOSPH6Q99547 160 aaKnown RBP6.79□□□□□ -1.32
USP38-203ENST00000511739 EHMT1Q9H9B1 1298 aa6.79□□□□□ -1.32
USP38-203ENST00000511739 IDH1O75874 414 aaKnown RBP6.78□□□□□ -1.32
USP38-203ENST00000511739 STAMBPO95630 424 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 CCDC96Q2M329 555 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 CCDC91Q7Z6B0 441 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 CEP170Q5SW79 1584 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 DENND4BO75064 1496 aaPredicted RBP6.78□□□□□ -1.32
USP38-203ENST00000511739 PZPP20742 1482 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 LETM1O95202 739 aaPredicted RBP6.78□□□□□ -1.32
USP38-203ENST00000511739 STK3Q13188 491 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 CCDC85AQ96PX6 553 aaPredicted RBP6.78□□□□□ -1.32
USP38-203ENST00000511739 SSX2IPQ9Y2D8 614 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 CWC15Q9P013 229 aaKnown RBP6.78□□□□□ -1.32
USP38-203ENST00000511739 CTNNA3Q9UI47 895 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 KDM5BQ9UGL1 1544 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 C11orf95C9JLR9 678 aaPredicted RBP6.78□□□□□ -1.32
USP38-203ENST00000511739 LIG1P18858 919 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 RFX1P22670 979 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 DZIP1Q86YF9 867 aaKnown RBP6.78□□□□□ -1.32
USP38-203ENST00000511739 TAF4BQ92750 862 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 ME1P48163 572 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 ANKRD1Q15327 319 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 AIDAQ96BJ3 306 aa6.78□□□□□ -1.32
USP38-203ENST00000511739 ZC3H6P61129 1189 aaKnown RBP6.77□□□□□ -1.33
USP38-203ENST00000511739 PDE3AQ14432 1141 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 LRSAM1Q6UWE0 723 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 ATF7IPQ6VMQ6 1270 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 SLF2Q8IX21 1173 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 TTC16Q8NEE8 873 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 SRCIN1Q9C0H9 1055 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 PRAG1Q86YV5 1406 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 WDR63Q8IWG1 891 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 FERMT2Q96AC1 680 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 CYP46A1Q9Y6A2 500 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 ZNF518AQ6AHZ1 1483 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 NEK4P51957 841 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 XPCQ01831 940 aaPredicted RBP6.77□□□□□ -1.33
USP38-203ENST00000511739 CEP57L1Q8IYX8 460 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 C6orf229H3BNL8 230 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 WASF1Q92558 559 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 C22orf23Q9BZE7 217 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 UBA5Q9GZZ9 404 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 TMOD3Q9NYL9 352 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 ABCA8O94911 1581 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 IFIT1P09914 478 aaKnown RBP6.77□□□□□ -1.33
USP38-203ENST00000511739 PRKAR2BP31323 418 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 EIF5P55010 431 aaKnown RBP6.77□□□□□ -1.33
USP38-203ENST00000511739 METTL24Q5JXM2 366 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 MAGI3Q5TCQ9 1506 aa6.77□□□□□ -1.33
USP38-203ENST00000511739 ABCC10Q5T3U5 1492 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 TEX14Q8IWB6 1497 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 MYO1BO43795 1136 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 SLC4A2P04920 1241 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 NOP2P46087 812 aaKnown RBP6.76□□□□□ -1.33
USP38-203ENST00000511739 ZNF692Q9BU19 519 aaPredicted RBP6.76□□□□□ -1.33
USP38-203ENST00000511739 MCM2P49736 904 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 TWISTNBQ3B726 338 aaPredicted RBP6.76□□□□□ -1.33
USP38-203ENST00000511739 SULT6B1Q6IMI4 303 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 ZNF444Q8N0Y2 327 aaPredicted RBP6.76□□□□□ -1.33
USP38-203ENST00000511739 RNF214Q8ND24 703 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 PUS7Q96PZ0 661 aaKnown RBP6.76□□□□□ -1.33
USP38-203ENST00000511739 LRRFIP2Q9Y608 721 aaKnown RBP6.76□□□□□ -1.33
USP38-203ENST00000511739 NSD2O96028 1365 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 FIBPO43427 364 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 NFKBIBQ15653 356 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.76□□□□□ -1.33
USP38-203ENST00000511739 BTBD11A6QL63 1104 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 HOOK3Q86VS8 718 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 ZNF622Q969S3 477 aaKnown RBP eCLIP6.76□□□□□ -1.33
USP38-203ENST00000511739 POGZQ7Z3K3 1410 aa6.76□□□□□ -1.33
USP38-203ENST00000511739 MINDY4BA8MYZ0 360 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 PTCD1O75127 700 aaKnown RBP6.75□□□□□ -1.33
USP38-203ENST00000511739 KIAA0754O94854 1291 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 MRPS9P82933 396 aaKnown RBP6.75□□□□□ -1.33
USP38-203ENST00000511739 DHX8Q14562 1220 aaKnown RBP6.75□□□□□ -1.33
USP38-203ENST00000511739 PRAM1Q96QH2 718 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 CABP5Q9NP86 173 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 BIN2Q9UBW5 565 aaPredicted RBP6.75□□□□□ -1.33
USP38-203ENST00000511739 CTNNA2P26232 953 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 HSP90AB3PQ58FF7 597 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 LEKR1Q6ZMV7 388 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 AACSQ86V21 672 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 SLC26A8Q96RN1 970 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 ASXL2Q76L83 1435 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 CCT4P50991 539 aaKnown RBP6.75□□□□□ -1.33
USP38-203ENST00000511739 IQCEQ6IPM2 695 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 A2MP01023 1474 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 RGS22Q8NE09 1264 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 CDK19Q9BWU1 502 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 CCDC39Q9UFE4 941 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 MACROD2A1Z1Q3 448 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 CBFA2T2O43439 604 aa6.75□□□□□ -1.33
USP38-203ENST00000511739 TRMT1LQ7Z2T5 733 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms