RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 ESCO1Q5FWF5 840 aa8.04□□□□□ -1.12
SCARB2-205ENST00000511129 Q6ZVU0 165 aa8.04□□□□□ -1.12
SCARB2-205ENST00000511129 ANKMY2Q8IV38 441 aa8.04□□□□□ -1.12
SCARB2-205ENST00000511129 TPCN2Q8NHX9 752 aa8.04□□□□□ -1.12
SCARB2-205ENST00000511129 NXF1Q9UBU9 619 aaKnown RBP8.04□□□□□ -1.12
SCARB2-205ENST00000511129 BICRAQ9NZM4 1560 aa8.04□□□□□ -1.12
SCARB2-205ENST00000511129 DPYDQ12882 1025 aa8.03□□□□□ -1.12
SCARB2-205ENST00000511129 GDF10P55107 478 aa8.02□□□□□ -1.13
SCARB2-205ENST00000511129 SEC13P55735 322 aa8.02□□□□□ -1.13
SCARB2-205ENST00000511129 RELBQ01201 579 aa8.02□□□□□ -1.13
SCARB2-205ENST00000511129 SIX5Q8N196 739 aa8.02□□□□□ -1.13
SCARB2-205ENST00000511129 SLC16A10Q8TF71 515 aa8.02□□□□□ -1.13
SCARB2-205ENST00000511129 ZFP42Q96MM3 310 aa8.02□□□□□ -1.13
SCARB2-205ENST00000511129 TSEN34Q9BSV6 310 aaKnown RBP8.02□□□□□ -1.13
SCARB2-205ENST00000511129 BACH1O14867 736 aa8.01□□□□□ -1.13
SCARB2-205ENST00000511129 PTGIRP43119 386 aa8.01□□□□□ -1.13
SCARB2-205ENST00000511129 RETREG2Q8NC44 543 aa8.01□□□□□ -1.13
SCARB2-205ENST00000511129 AGBL1Q96MI9 1066 aa8.01□□□□□ -1.13
SCARB2-205ENST00000511129 NLRP3Q96P20 1036 aa8.01□□□□□ -1.13
SCARB2-205ENST00000511129 ARHGEF10LQ9HCE6 1279 aa8.01□□□□□ -1.13
SCARB2-205ENST00000511129 KIAA1024Q9UPX6 916 aa8.01□□□□□ -1.13
SCARB2-205ENST00000511129 MEN1O00255 615 aa8□□□□□ -1.13
SCARB2-205ENST00000511129 PDIA4P13667 645 aaKnown RBP8□□□□□ -1.13
SCARB2-205ENST00000511129 SCARF1Q14162 830 aa8□□□□□ -1.13
SCARB2-205ENST00000511129 NPAS3Q8IXF0 933 aa8□□□□□ -1.13
SCARB2-205ENST00000511129 MEIOBQ8N635 442 aa8□□□□□ -1.13
SCARB2-205ENST00000511129 SERBP1Q8NC51 408 aaKnown RBP eCLIP8□□□□□ -1.13
SCARB2-205ENST00000511129 HINFPQ9BQA5 517 aa8□□□□□ -1.13
SCARB2-205ENST00000511129 A0A1W2PRU2 124 aa7.99□□□□□ -1.13
SCARB2-205ENST00000511129 SFI1A8K8P3 1242 aa7.99□□□□□ -1.13
SCARB2-205ENST00000511129 INHAP05111 366 aa7.99□□□□□ -1.13
SCARB2-205ENST00000511129 ZNF395Q9H8N7 513 aaPredicted RBP7.99□□□□□ -1.13
SCARB2-205ENST00000511129 RAB6BQ9NRW1 208 aa7.99□□□□□ -1.13
SCARB2-205ENST00000511129 SERTAD1Q9UHV2 236 aa7.99□□□□□ -1.13
SCARB2-205ENST00000511129 ZMIZ1Q9ULJ6 1067 aa7.99□□□□□ -1.13
SCARB2-205ENST00000511129 USTQ9Y2C2 406 aa7.99□□□□□ -1.13
SCARB2-205ENST00000511129 VEGFBP49765 207 aa7.98□□□□□ -1.13
SCARB2-205ENST00000511129 MRPL14Q6P1L8 145 aaKnown RBP7.98□□□□□ -1.13
SCARB2-205ENST00000511129 STK32AQ8WU08 396 aa7.98□□□□□ -1.13
SCARB2-205ENST00000511129 CNKSR1Q969H4 720 aa7.98□□□□□ -1.13
SCARB2-205ENST00000511129 ETNK1Q9HBU6 452 aa7.98□□□□□ -1.13
SCARB2-205ENST00000511129 ZNF358Q9NW07 568 aa7.98□□□□□ -1.13
SCARB2-205ENST00000511129 TMEM229AB2RXF0 380 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 H3BM21 787 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 M0R2N6 131 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 WASLO00401 505 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-205ENST00000511129 STAU1O95793 577 aaKnown RBP7.97□□□□□ -1.13
SCARB2-205ENST00000511129 BMP2P12643 396 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 GTF2E1P29083 439 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-205ENST00000511129 GMPRP36959 345 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 SCNN1DP51172 638 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 CLN3Q13286 438 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 TMEM164Q5U3C3 297 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 XAGE2Q96GT9 111 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 ESYT1Q9BSJ8 1104 aa7.97□□□□□ -1.13
SCARB2-205ENST00000511129 SWI5Q1ZZU3 235 aa7.96□□□□□ -1.14
SCARB2-205ENST00000511129 C6orf118Q5T5N4 469 aa7.96□□□□□ -1.14
SCARB2-205ENST00000511129 KDF1Q8NAX2 398 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-205ENST00000511129 IRF7Q92985 503 aa7.96□□□□□ -1.14
SCARB2-205ENST00000511129 PURBQ96QR8 312 aaKnown RBP7.96□□□□□ -1.14
SCARB2-205ENST00000511129 DKK1O94907 266 aa7.95□□□□□ -1.14
SCARB2-205ENST00000511129 IL2RAP01589 272 aa7.95□□□□□ -1.14
SCARB2-205ENST00000511129 TLR1Q15399 786 aa7.95□□□□□ -1.14
SCARB2-205ENST00000511129 TSEN2Q8NCE0 465 aaKnown RBP7.95□□□□□ -1.14
SCARB2-205ENST00000511129 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
SCARB2-205ENST00000511129 POLMQ9NP87 494 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-205ENST00000511129 A6NJY4 79 aa7.94□□□□□ -1.14
SCARB2-205ENST00000511129 SPINT1O43278 529 aa7.94□□□□□ -1.14
SCARB2-205ENST00000511129 SMTNP53814 917 aa7.94□□□□□ -1.14
SCARB2-205ENST00000511129 CENPCQ03188 943 aa7.94□□□□□ -1.14
SCARB2-205ENST00000511129 SLC27A3Q5K4L6 730 aa7.94□□□□□ -1.14
SCARB2-205ENST00000511129 INSM2Q96T92 566 aaPredicted RBP7.94□□□□□ -1.14
SCARB2-205ENST00000511129 ERBB4Q15303 1308 aa7.94□□□□□ -1.14
SCARB2-205ENST00000511129 TMEM88BA6NKF7 163 aa7.93□□□□□ -1.14
SCARB2-205ENST00000511129 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
SCARB2-205ENST00000511129 TNS4Q8IZW8 715 aa7.93□□□□□ -1.14
SCARB2-205ENST00000511129 SCRIBQ14160 1630 aa7.92□□□□□ -1.14
SCARB2-205ENST00000511129 SOBPA7XYQ1 873 aa7.92□□□□□ -1.14
SCARB2-205ENST00000511129 GPC1P35052 558 aa7.92□□□□□ -1.14
SCARB2-205ENST00000511129 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
SCARB2-205ENST00000511129 TMEM214Q6NUQ4 689 aaKnown RBP7.92□□□□□ -1.14
SCARB2-205ENST00000511129 CLP1Q92989 425 aaKnown RBP7.92□□□□□ -1.14
SCARB2-205ENST00000511129 ZSCAN10Q96SZ4 725 aaPredicted RBP7.92□□□□□ -1.14
SCARB2-205ENST00000511129 TRAIPQ9BWF2 469 aa7.92□□□□□ -1.14
SCARB2-205ENST00000511129 CARNS1A5YM72 827 aa7.91□□□□□ -1.14
SCARB2-205ENST00000511129 RNF144AP50876 292 aaPredicted RBP7.91□□□□□ -1.14
SCARB2-205ENST00000511129 FAM69CQ0P6D2 419 aa7.91□□□□□ -1.14
SCARB2-205ENST00000511129 NBPF15Q8N660 670 aa7.91□□□□□ -1.14
SCARB2-205ENST00000511129 ZSCAN1Q8NBB4 408 aa7.91□□□□□ -1.14
SCARB2-205ENST00000511129 CHMP3Q9Y3E7 222 aa7.91□□□□□ -1.14
SCARB2-205ENST00000511129 TTLL8A6PVC2 850 aa7.9□□□□□ -1.14
SCARB2-205ENST00000511129 CDK2AP1O14519 115 aa7.9□□□□□ -1.14
SCARB2-205ENST00000511129 PRMT3O60678 531 aa7.9□□□□□ -1.14
SCARB2-205ENST00000511129 LGR5O75473 907 aa7.9□□□□□ -1.14
SCARB2-205ENST00000511129 CTSOP43234 321 aaPredicted RBP7.9□□□□□ -1.14
SCARB2-205ENST00000511129 MTFR1Q15390 333 aa7.9□□□□□ -1.14
SCARB2-205ENST00000511129 GNASQ5JWF2 1037 aa7.9□□□□□ -1.14
SCARB2-205ENST00000511129 HRH3Q9Y5N1 445 aa7.9□□□□□ -1.14
SCARB2-205ENST00000511129 ATAD2Q6PL18 1390 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms