RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
NR1I3-227ENST00000510951 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
NR1I3-227ENST00000510951 UBR2Q8IWV8 1755 aa13.73□□□□□ -0.21
NR1I3-227ENST00000510951 TAF1LQ8IZX4 1826 aa13.72□□□□□ -0.21
NR1I3-227ENST00000510951 BAG6P46379 1132 aa13.72□□□□□ -0.21
NR1I3-227ENST00000510951 RIPK4P57078 832 aa13.72□□□□□ -0.21
NR1I3-227ENST00000510951 IL17REQ8NFR9 667 aa13.72□□□□□ -0.21
NR1I3-227ENST00000510951 PIGBQ92521 554 aa13.72□□□□□ -0.21
NR1I3-227ENST00000510951 KDM3BQ7LBC6 1761 aa13.72□□□□□ -0.21
NR1I3-227ENST00000510951 ERVV-2B6SEH9 535 aa13.71□□□□□ -0.21
NR1I3-227ENST00000510951 EN1Q05925 392 aaPredicted RBP13.71□□□□□ -0.21
NR1I3-227ENST00000510951 CCDC125Q86Z20 511 aa13.71□□□□□ -0.21
NR1I3-227ENST00000510951 NFATC2IPQ8NCF5 419 aa13.71□□□□□ -0.21
NR1I3-227ENST00000510951 SLC52A2Q9HAB3 445 aa13.71□□□□□ -0.21
NR1I3-227ENST00000510951 C5P01031 1676 aa13.71□□□□□ -0.21
NR1I3-227ENST00000510951 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.22
NR1I3-227ENST00000510951 PALLDQ8WX93 1383 aa13.71□□□□□ -0.22
NR1I3-227ENST00000510951 TEFQ10587 303 aa13.7□□□□□ -0.22
NR1I3-227ENST00000510951 LMOD3Q0VAK6 560 aa13.69□□□□□ -0.22
NR1I3-227ENST00000510951 EZH2Q15910 746 aaKnown RBP13.69□□□□□ -0.22
NR1I3-227ENST00000510951 ASAP1Q9ULH1 1129 aa13.69□□□□□ -0.22
NR1I3-227ENST00000510951 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
NR1I3-227ENST00000510951 TJP1Q07157 1748 aa13.69□□□□□ -0.22
NR1I3-227ENST00000510951 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
NR1I3-227ENST00000510951 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
NR1I3-227ENST00000510951 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
NR1I3-227ENST00000510951 TUBGCP6Q96RT7 1819 aa13.67□□□□□ -0.22
NR1I3-227ENST00000510951 KCNQ4P56696 695 aa13.67□□□□□ -0.22
NR1I3-227ENST00000510951 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
NR1I3-227ENST00000510951 ATG3Q9NT62 314 aa13.67□□□□□ -0.22
NR1I3-227ENST00000510951 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
NR1I3-227ENST00000510951 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
NR1I3-227ENST00000510951 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
NR1I3-227ENST00000510951 PLSCR1O15162 318 aa13.65□□□□□ -0.22
NR1I3-227ENST00000510951 TXNRD1Q16881 649 aa13.65□□□□□ -0.22
NR1I3-227ENST00000510951 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
NR1I3-227ENST00000510951 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
NR1I3-227ENST00000510951 CICQ96RK0 1608 aaPredicted RBP13.64□□□□□ -0.23
NR1I3-227ENST00000510951 C4BP0C0L5 1744 aa13.64□□□□□ -0.23
NR1I3-227ENST00000510951 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
NR1I3-227ENST00000510951 PTCD1O75127 700 aaKnown RBP13.64□□□□□ -0.23
NR1I3-227ENST00000510951 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
NR1I3-227ENST00000510951 MIS18AQ9NYP9 233 aa13.64□□□□□ -0.23
NR1I3-227ENST00000510951 CCNL1Q9UK58 526 aaPredicted RBP13.64□□□□□ -0.23
NR1I3-227ENST00000510951 KCNQ3O43525 872 aa13.63□□□□□ -0.23
NR1I3-227ENST00000510951 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
NR1I3-227ENST00000510951 PROM2Q8N271 834 aa13.63□□□□□ -0.23
NR1I3-227ENST00000510951 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
NR1I3-227ENST00000510951 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
NR1I3-227ENST00000510951 LOC102724428A0A0B4J2F2 783 aa13.62□□□□□ -0.23
NR1I3-227ENST00000510951 SIK1P57059 783 aa13.62□□□□□ -0.23
NR1I3-227ENST00000510951 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
NR1I3-227ENST00000510951 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
NR1I3-227ENST00000510951 LRRC4BQ9NT99 713 aa13.62□□□□□ -0.23
NR1I3-227ENST00000510951 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
NR1I3-227ENST00000510951 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
NR1I3-227ENST00000510951 TSPYL4Q9UJ04 414 aa13.61□□□□□ -0.23
NR1I3-227ENST00000510951 ATP6V1AP38606 617 aa13.6□□□□□ -0.23
NR1I3-227ENST00000510951 ITPK1Q13572 414 aa13.6□□□□□ -0.23
NR1I3-227ENST00000510951 QSER1Q2KHR3 1735 aa13.6□□□□□ -0.23
NR1I3-227ENST00000510951 CCDC27Q2M243 656 aa13.6□□□□□ -0.23
NR1I3-227ENST00000510951 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
NR1I3-227ENST00000510951 ZNF496Q96IT1 587 aaPredicted RBP13.6□□□□□ -0.23
NR1I3-227ENST00000510951 SLC4A9Q96Q91 983 aa13.6□□□□□ -0.23
NR1I3-227ENST00000510951 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
NR1I3-227ENST00000510951 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.23
NR1I3-227ENST00000510951 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
NR1I3-227ENST00000510951 LINC00116Q8NCU8 138 aa13.58□□□□□ -0.24
NR1I3-227ENST00000510951 FMNL2Q96PY5 1086 aa13.58□□□□□ -0.24
NR1I3-227ENST00000510951 C4AP0C0L4 1744 aa13.57□□□□□ -0.24
NR1I3-227ENST00000510951 HNRNPUQ00839 825 aaKnown RBP eCLIP13.57□□□□□ -0.24
NR1I3-227ENST00000510951 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
NR1I3-227ENST00000510951 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
NR1I3-227ENST00000510951 MBIPQ9NS73 344 aa13.57□□□□□ -0.24
NR1I3-227ENST00000510951 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
NR1I3-227ENST00000510951 PRAMEF22A3QJZ6 481 aa13.56□□□□□ -0.24
NR1I3-227ENST00000510951 TSR2Q969E8 191 aaKnown RBP13.56□□□□□ -0.24
NR1I3-227ENST00000510951 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
NR1I3-227ENST00000510951 CASZ1Q86V15 1759 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 PSDA5PKW4 1024 aaPredicted RBP13.55□□□□□ -0.24
NR1I3-227ENST00000510951 CHL1O00533 1208 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
NR1I3-227ENST00000510951 GNAI1P63096 354 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
NR1I3-227ENST00000510951 NBPF14Q5TI25 921 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 NGEFQ8N5V2 710 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 ZNF521Q96K83 1311 aa13.55□□□□□ -0.24
NR1I3-227ENST00000510951 AK7Q96M32 723 aa13.54□□□□□ -0.24
NR1I3-227ENST00000510951 BABAM1Q9NWV8 329 aa13.54□□□□□ -0.24
NR1I3-227ENST00000510951 GNPATO15228 680 aa13.53□□□□□ -0.24
NR1I3-227ENST00000510951 PHF14O94880 888 aa13.53□□□□□ -0.24
NR1I3-227ENST00000510951 SNRPA1P09661 255 aaKnown RBP13.53□□□□□ -0.24
NR1I3-227ENST00000510951 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
NR1I3-227ENST00000510951 R3HDM1Q15032 1099 aaKnown RBP13.53□□□□□ -0.24
NR1I3-227ENST00000510951 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
NR1I3-227ENST00000510951 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
NR1I3-227ENST00000510951 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms