RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 GJA3Q9Y6H8 435 aa15.62■□□□□ 0.09
LIN54-210ENST00000510877 EIF6P56537 245 aaKnown RBP15.62■□□□□ 0.09
LIN54-210ENST00000510877 CCAR1Q8IX12 1150 aaKnown RBP15.62■□□□□ 0.09
LIN54-210ENST00000510877 MROH2AA6NES4 1674 aa15.62■□□□□ 0.09
LIN54-210ENST00000510877 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
LIN54-210ENST00000510877 MMP10P09238 476 aa15.61■□□□□ 0.09
LIN54-210ENST00000510877 MTFR1LQ9H019 292 aa15.61■□□□□ 0.09
LIN54-210ENST00000510877 ERICH6BQ5W0A0 696 aa15.61■□□□□ 0.09
LIN54-210ENST00000510877 CCDC85AQ96PX6 553 aaPredicted RBP15.61■□□□□ 0.09
LIN54-210ENST00000510877 AXIN2Q9Y2T1 843 aa15.6■□□□□ 0.09
LIN54-210ENST00000510877 PDE6BP35913 854 aa15.6■□□□□ 0.09
LIN54-210ENST00000510877 TMOD2Q9NZR1 351 aa15.6■□□□□ 0.09
LIN54-210ENST00000510877 APBB1O00213 710 aa15.6■□□□□ 0.09
LIN54-210ENST00000510877 EAPPQ56P03 285 aaPredicted RBP15.6■□□□□ 0.09
LIN54-210ENST00000510877 TESK2Q96S53 571 aa15.6■□□□□ 0.09
LIN54-210ENST00000510877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.6■□□□□ 0.095e-8■□□□□ 10.8
LIN54-210ENST00000510877 SSH2Q76I76 1423 aa15.59■□□□□ 0.09
LIN54-210ENST00000510877 RNMTO43148 476 aaKnown RBP15.58■□□□□ 0.09
LIN54-210ENST00000510877 PHKG2P15735 406 aa15.58■□□□□ 0.09
LIN54-210ENST00000510877 DALRD3Q5D0E6 543 aaKnown RBP15.58■□□□□ 0.09
LIN54-210ENST00000510877 C2CD5Q86YS7 1000 aa15.58■□□□□ 0.09
LIN54-210ENST00000510877 UNC13BO14795 1591 aa15.58■□□□□ 0.09
LIN54-210ENST00000510877 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
LIN54-210ENST00000510877 MARCH10Q8NA82 808 aaPredicted RBP15.58■□□□□ 0.08
LIN54-210ENST00000510877 PALLDQ8WX93 1383 aa15.58■□□□□ 0.08
LIN54-210ENST00000510877 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
LIN54-210ENST00000510877 CLTCL1P53675 1640 aa15.58■□□□□ 0.08
LIN54-210ENST00000510877 ASAP1Q9ULH1 1129 aa15.57■□□□□ 0.08
LIN54-210ENST00000510877 CNKSR1Q969H4 720 aa15.57■□□□□ 0.08
LIN54-210ENST00000510877 BLMP54132 1417 aaPredicted RBP15.57■□□□□ 0.08
LIN54-210ENST00000510877 ASXL1Q8IXJ9 1541 aa15.57■□□□□ 0.08
LIN54-210ENST00000510877 CCDC57Q2TAC2 916 aa15.57■□□□□ 0.08
LIN54-210ENST00000510877 RALGAPBQ86X10 1494 aa15.57■□□□□ 0.08
LIN54-210ENST00000510877 THUMPD2Q9BTF0 503 aaKnown RBP15.56■□□□□ 0.08
LIN54-210ENST00000510877 INSRP06213 1382 aa15.56■□□□□ 0.08
LIN54-210ENST00000510877 ATP7BP35670 1465 aa15.56■□□□□ 0.08
LIN54-210ENST00000510877 LARGE2Q8N3Y3 721 aa15.56■□□□□ 0.08
LIN54-210ENST00000510877 NF2P35240 595 aa15.56■□□□□ 0.08
LIN54-210ENST00000510877 MTHFSDQ2M296 383 aaKnown RBP15.56■□□□□ 0.08
LIN54-210ENST00000510877 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
LIN54-210ENST00000510877 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
LIN54-210ENST00000510877 ZNF408Q9H9D4 720 aa15.55■□□□□ 0.08
LIN54-210ENST00000510877 OGFOD1Q8N543 542 aa15.55■□□□□ 0.08
LIN54-210ENST00000510877 TULP4Q9NRJ4 1543 aa15.55■□□□□ 0.08
LIN54-210ENST00000510877 SOGA3Q5TF21 947 aa15.55■□□□□ 0.08
LIN54-210ENST00000510877 CTDP1Q9Y5B0 961 aaPredicted RBP15.55■□□□□ 0.08
LIN54-210ENST00000510877 ITPRIPQ8IWB1 547 aa15.55■□□□□ 0.08
LIN54-210ENST00000510877 GNL3LQ9NVN8 582 aaKnown RBP15.55■□□□□ 0.08
LIN54-210ENST00000510877 ZC3H12CQ9C0D7 883 aaKnown RBP15.54■□□□□ 0.08
LIN54-210ENST00000510877 SLC52A2Q9HAB3 445 aa15.54■□□□□ 0.08
LIN54-210ENST00000510877 HMMRO75330 724 aa15.54■□□□□ 0.08
LIN54-210ENST00000510877 CDC5LQ99459 802 aaKnown RBP15.54■□□□□ 0.08
LIN54-210ENST00000510877 DBF4Q9UBU7 674 aaPredicted RBP15.54■□□□□ 0.08
LIN54-210ENST00000510877 AMOTL1Q8IY63 956 aa15.54■□□□□ 0.08
LIN54-210ENST00000510877 TECPR2O15040 1411 aa15.53■□□□□ 0.08
LIN54-210ENST00000510877 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
LIN54-210ENST00000510877 PIP4K2AP48426 406 aaPredicted RBP15.53■□□□□ 0.08
LIN54-210ENST00000510877 TWISTNBQ3B726 338 aaPredicted RBP15.53■□□□□ 0.08
LIN54-210ENST00000510877 ALDH1B1P30837 517 aa15.53■□□□□ 0.08
LIN54-210ENST00000510877 RBM26Q5T8P6 1007 aaKnown RBP15.53■□□□□ 0.08
LIN54-210ENST00000510877 RBM17Q96I25 401 aaKnown RBP15.53■□□□□ 0.08
LIN54-210ENST00000510877 UTP14AQ9BVJ6 771 aaKnown RBP15.53■□□□□ 0.08
LIN54-210ENST00000510877 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
LIN54-210ENST00000510877 ADAMTS8Q9UP79 889 aa15.53■□□□□ 0.08
LIN54-210ENST00000510877 USPL1Q5W0Q7 1092 aa15.53■□□□□ 0.08
LIN54-210ENST00000510877 ZNF790Q6PG37 636 aa15.53■□□□□ 0.08
LIN54-210ENST00000510877 SPHKAPQ2M3C7 1700 aa15.52■□□□□ 0.08
LIN54-210ENST00000510877 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
LIN54-210ENST00000510877 LRRIQ1Q96JM4 1722 aa15.52■□□□□ 0.08
LIN54-210ENST00000510877 EYA3Q99504 573 aa15.52■□□□□ 0.08
LIN54-210ENST00000510877 HYPKQ9NX55 129 aa15.52■□□□□ 0.08
LIN54-210ENST00000510877 NSFL1CQ9UNZ2 370 aaKnown RBP15.52■□□□□ 0.08
LIN54-210ENST00000510877 CRKLP46109 303 aaKnown RBP15.51■□□□□ 0.07
LIN54-210ENST00000510877 CLUAP1Q96AJ1 413 aa15.51■□□□□ 0.07
LIN54-210ENST00000510877 PIGBQ92521 554 aa15.51■□□□□ 0.07
LIN54-210ENST00000510877 E9PCH4 1651 aa15.51■□□□□ 0.07
LIN54-210ENST00000510877 TMPOP42166 694 aaKnown RBP15.51■□□□□ 0.07
LIN54-210ENST00000510877 G3BP1Q13283 466 aaKnown RBP eCLIP15.51■□□□□ 0.07
LIN54-210ENST00000510877 API5Q9BZZ5 524 aaKnown RBP15.51■□□□□ 0.07
LIN54-210ENST00000510877 SBNO2Q9Y2G9 1366 aa15.51■□□□□ 0.07
LIN54-210ENST00000510877 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
LIN54-210ENST00000510877 RTL1A6NKG5 1358 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 NIM1KQ8IY84 436 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 CDC42BPGQ6DT37 1551 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 RAD21O60216 631 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 AIDAQ96BJ3 306 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 MYD88Q99836 296 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 RNF181Q9P0P0 153 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 MYO1BO43795 1136 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
LIN54-210ENST00000510877 HTATSF1O43719 755 aaKnown RBP15.49■□□□□ 0.07
LIN54-210ENST00000510877 HDAC9Q9UKV0 1011 aa15.49■□□□□ 0.07
LIN54-210ENST00000510877 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
LIN54-210ENST00000510877 CPSF1Q10570 1443 aaKnown RBP15.49■□□□□ 0.07
LIN54-210ENST00000510877 SERPINB2P05120 415 aa15.49■□□□□ 0.07
LIN54-210ENST00000510877 ADRA2BP18089 450 aa15.49■□□□□ 0.07
LIN54-210ENST00000510877 TTLL6Q8N841 843 aa15.49■□□□□ 0.07
LIN54-210ENST00000510877 GPATCH3Q96I76 525 aa15.49■□□□□ 0.07
LIN54-210ENST00000510877 MAP3K5Q99683 1374 aa15.49■□□□□ 0.07
LIN54-210ENST00000510877 CROCC2H7BZ55 1655 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms