RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 CWC15Q9P013 229 aaKnown RBP11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 PTPRCP08575 1304 aa11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 EXOSC9Q06265 439 aaKnown RBP11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 GOLGA6L1Q8N7Z2 621 aa11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 NEK11Q8NG66 645 aa11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 INTS4Q96HW7 963 aaKnown RBP11.97□□□□□ -0.49
PDGFRA-207ENST00000509092 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 PRR29P0C7W0 189 aa11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 TPM4P67936 248 aa11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 SRPK2P78362 688 aaKnown RBP11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 CNPY4Q8N129 248 aa11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 GTF3C6Q969F1 213 aa11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 ATG3Q9NT62 314 aa11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 FHOD1Q9Y613 1164 aa11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 CCDC171Q6TFL3 1326 aa11.96□□□□□ -0.49
PDGFRA-207ENST00000509092 TRIM66O15016 1216 aa11.96□□□□□ -0.5
PDGFRA-207ENST00000509092 H2AFXP16104 143 aaPredicted RBP11.96□□□□□ -0.5
PDGFRA-207ENST00000509092 GYS2P54840 703 aa11.96□□□□□ -0.5
PDGFRA-207ENST00000509092 TTC22Q5TAA0 569 aa11.96□□□□□ -0.5
PDGFRA-207ENST00000509092 ERBB3P21860 1342 aa11.96□□□□□ -0.5
PDGFRA-207ENST00000509092 UNC13BO14795 1591 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 UBE2HP62256 183 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 LRMPQ12912 555 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 CCDC186Q7Z3E2 898 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 BANK1Q8NDB2 785 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 TSR2Q969E8 191 aaKnown RBP11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 CEP83Q9Y592 693 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 ZSCAN25Q6NSZ9 544 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 CASC1Q6TDU7 716 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 PLEKHM2Q8IWE5 1019 aa11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 V9GYY5 206 aaPredicted RBP11.95□□□□□ -0.5
PDGFRA-207ENST00000509092 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 MYOM2P54296 1465 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 SLU7O95391 586 aaKnown RBP11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 PLA2G4AP47712 749 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 CCDC191Q8NCU4 936 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 ZNF592Q92610 1267 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 TRAPPC8Q9Y2L5 1435 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 NEO1Q92859 1461 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 A0A1B0GUL7 405 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 CCDC172P0C7W6 258 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 PNMA6AP0CW24 399 aaPredicted RBP11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 GPS2Q13227 327 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 ZSCAN26Q16670 478 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 CT47A1Q5JQC4 288 aaPredicted RBP11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 SRLQ86TD4 932 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 LCMT1Q9UIC8 334 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 JRKLQ9Y4A0 524 aa11.94□□□□□ -0.5
PDGFRA-207ENST00000509092 ZNF518AQ6AHZ1 1483 aa11.93□□□□□ -0.5
PDGFRA-207ENST00000509092 TSPY4P0CV99 314 aa11.93□□□□□ -0.5
PDGFRA-207ENST00000509092 TSPY10P0CW01 314 aa11.93□□□□□ -0.5
PDGFRA-207ENST00000509092 SPAG9O60271 1321 aaKnown RBP11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 GIMAP6Q6P9H5 292 aa11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 CARD10Q9BWT7 1032 aa11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 CARD14Q9BXL6 1004 aa11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 CCDC192P0DO97 292 aa11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 NOM1Q5C9Z4 860 aaKnown RBP11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 AFAP1Q8N556 730 aa11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 RRP15Q9Y3B9 282 aaKnown RBP11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 DUOX2Q9NRD8 1548 aa11.92□□□□□ -0.5
PDGFRA-207ENST00000509092 ZBTB7BO15156 539 aaPredicted RBP11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 NEK4P51957 841 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 PTPN14Q15678 1187 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 FOXD4L6Q3SYB3 417 aaPredicted RBP11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 FOXD4L3Q6VB84 417 aaPredicted RBP11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 FAM200AQ8TCP9 573 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 IQGAP3Q86VI3 1631 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 PLEKHG2Q9H7P9 1386 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 TRHP20396 242 aaPredicted RBP11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 ALDH1L2Q3SY69 923 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 TTC31Q49AM3 519 aaPredicted RBP11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 FBXO18Q8NFZ0 1043 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 GOLGA5Q8TBA6 731 aa11.91□□□□□ -0.5
PDGFRA-207ENST00000509092 ATP2B1P20020 1258 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 CLCN6P51797 869 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 TSGA10IPQ3SY00 556 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 SMARCE1Q969G3 411 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 PIK3R4Q99570 1358 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 IL16Q14005 1332 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 PLA2G4DQ86XP0 818 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 SIRT2Q8IXJ6 389 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 GPATCH11Q8N954 259 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 IQUBQ8NA54 791 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 TOMM22Q9NS69 142 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 NRBP1Q9UHY1 535 aa11.9□□□□□ -0.5
PDGFRA-207ENST00000509092 MAST1Q9Y2H9 1570 aa11.9□□□□□ -0.51
PDGFRA-207ENST00000509092 RTL1A6NKG5 1358 aa11.9□□□□□ -0.51
PDGFRA-207ENST00000509092 ERC2O15083 957 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 POLR3GO15318 223 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms