RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 RREB1Q92766 1687 aa13.68□□□□□ -0.22
PTPN20-220ENST00000508715 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
PTPN20-220ENST00000508715 SOCS7O14512 581 aa13.67□□□□□ -0.22
PTPN20-220ENST00000508715 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
PTPN20-220ENST00000508715 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
PTPN20-220ENST00000508715 PROM2Q8N271 834 aa13.67□□□□□ -0.22
PTPN20-220ENST00000508715 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
PTPN20-220ENST00000508715 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
PTPN20-220ENST00000508715 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
PTPN20-220ENST00000508715 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
PTPN20-220ENST00000508715 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
PTPN20-220ENST00000508715 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
PTPN20-220ENST00000508715 PLSCR1O15162 318 aa13.65□□□□□ -0.22
PTPN20-220ENST00000508715 APBA3O96018 575 aa13.65□□□□□ -0.22
PTPN20-220ENST00000508715 CABP4P57796 275 aa13.65□□□□□ -0.22
PTPN20-220ENST00000508715 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
PTPN20-220ENST00000508715 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
PTPN20-220ENST00000508715 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
PTPN20-220ENST00000508715 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
PTPN20-220ENST00000508715 MYH14Q7Z406 1995 aaKnown RBP13.64□□□□□ -0.23
PTPN20-220ENST00000508715 KCNQ3O43525 872 aa13.64□□□□□ -0.23
PTPN20-220ENST00000508715 NEFMP07197 916 aa13.64□□□□□ -0.23
PTPN20-220ENST00000508715 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
PTPN20-220ENST00000508715 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
PTPN20-220ENST00000508715 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
PTPN20-220ENST00000508715 LRRC4BQ9NT99 713 aa13.63□□□□□ -0.23
PTPN20-220ENST00000508715 TJP1Q07157 1748 aa13.63□□□□□ -0.23
PTPN20-220ENST00000508715 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
PTPN20-220ENST00000508715 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-220ENST00000508715 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
PTPN20-220ENST00000508715 CICQ96RK0 1608 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-220ENST00000508715 KCNQ4P56696 695 aa13.62□□□□□ -0.23
PTPN20-220ENST00000508715 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
PTPN20-220ENST00000508715 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
PTPN20-220ENST00000508715 C5P01031 1676 aa13.61□□□□□ -0.23
PTPN20-220ENST00000508715 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
PTPN20-220ENST00000508715 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
PTPN20-220ENST00000508715 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
PTPN20-220ENST00000508715 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
PTPN20-220ENST00000508715 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
PTPN20-220ENST00000508715 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
PTPN20-220ENST00000508715 BAG6P46379 1132 aa13.6□□□□□ -0.23
PTPN20-220ENST00000508715 TEFQ10587 303 aa13.6□□□□□ -0.23
PTPN20-220ENST00000508715 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-220ENST00000508715 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
PTPN20-220ENST00000508715 ZNF853P0CG23 659 aa13.59□□□□□ -0.23
PTPN20-220ENST00000508715 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
PTPN20-220ENST00000508715 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
PTPN20-220ENST00000508715 CHL1O00533 1208 aa13.58□□□□□ -0.24
PTPN20-220ENST00000508715 LMOD3Q0VAK6 560 aa13.58□□□□□ -0.24
PTPN20-220ENST00000508715 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
PTPN20-220ENST00000508715 ITPK1Q13572 414 aa13.58□□□□□ -0.24
PTPN20-220ENST00000508715 ZNF790Q6PG37 636 aa13.58□□□□□ -0.24
PTPN20-220ENST00000508715 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-220ENST00000508715 ZNF496Q96IT1 587 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-220ENST00000508715 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
PTPN20-220ENST00000508715 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
PTPN20-220ENST00000508715 LOC102724428A0A0B4J2F2 783 aa13.57□□□□□ -0.24
PTPN20-220ENST00000508715 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
PTPN20-220ENST00000508715 SIK1P57059 783 aa13.57□□□□□ -0.24
PTPN20-220ENST00000508715 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
PTPN20-220ENST00000508715 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
PTPN20-220ENST00000508715 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
PTPN20-220ENST00000508715 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
PTPN20-220ENST00000508715 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
PTPN20-220ENST00000508715 LINC00116Q8NCU8 138 aa13.55□□□□□ -0.24
PTPN20-220ENST00000508715 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
PTPN20-220ENST00000508715 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
PTPN20-220ENST00000508715 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
PTPN20-220ENST00000508715 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
PTPN20-220ENST00000508715 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
PTPN20-220ENST00000508715 SLC27A3Q5K4L6 730 aa13.54□□□□□ -0.24
PTPN20-220ENST00000508715 AMIGO3Q86WK7 504 aa13.54□□□□□ -0.24
PTPN20-220ENST00000508715 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
PTPN20-220ENST00000508715 QSER1Q2KHR3 1735 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 IL16Q14005 1332 aa13.53□□□□□ -0.24
PTPN20-220ENST00000508715 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
PTPN20-220ENST00000508715 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
PTPN20-220ENST00000508715 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.25
PTPN20-220ENST00000508715 USP16Q9Y5T5 823 aa13.52□□□□□ -0.25
PTPN20-220ENST00000508715 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-220ENST00000508715 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
PTPN20-220ENST00000508715 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
PTPN20-220ENST00000508715 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
PTPN20-220ENST00000508715 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
PTPN20-220ENST00000508715 CYP19A1P11511 503 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-220ENST00000508715 ADRA2BP18089 450 aa13.5□□□□□ -0.25
PTPN20-220ENST00000508715 GNAI1P63096 354 aa13.5□□□□□ -0.25
PTPN20-220ENST00000508715 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN20-220ENST00000508715 INTS5Q6P9B9 1019 aaKnown RBP13.5□□□□□ -0.25
PTPN20-220ENST00000508715 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
PTPN20-220ENST00000508715 C4AP0C0L4 1744 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms