RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
SFXN1-205ENST00000506963 LMOD3Q0VAK6 560 aa12.84□□□□□ -0.35
SFXN1-205ENST00000506963 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
SFXN1-205ENST00000506963 MIER1Q8N108 512 aa12.84□□□□□ -0.35
SFXN1-205ENST00000506963 NFATC2IPQ8NCF5 419 aa12.84□□□□□ -0.35
SFXN1-205ENST00000506963 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
SFXN1-205ENST00000506963 RIPK4P57078 832 aa12.83□□□□□ -0.36
SFXN1-205ENST00000506963 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.36
SFXN1-205ENST00000506963 PROM2Q8N271 834 aa12.83□□□□□ -0.36
SFXN1-205ENST00000506963 CICQ96RK0 1608 aaPredicted RBP12.83□□□□□ -0.36
SFXN1-205ENST00000506963 PALLDQ8WX93 1383 aa12.82□□□□□ -0.36
SFXN1-205ENST00000506963 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
SFXN1-205ENST00000506963 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
SFXN1-205ENST00000506963 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
SFXN1-205ENST00000506963 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
SFXN1-205ENST00000506963 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
SFXN1-205ENST00000506963 UBR2Q8IWV8 1755 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 APAF1O14727 1248 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 MSH5O43196 834 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 TEFQ10587 303 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 MCM10Q7L590 875 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
SFXN1-205ENST00000506963 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
SFXN1-205ENST00000506963 TAF1LQ8IZX4 1826 aa12.79□□□□□ -0.36
SFXN1-205ENST00000506963 KCPQ6ZWJ8 1503 aa12.79□□□□□ -0.36
SFXN1-205ENST00000506963 DCTN1Q14203 1278 aa12.79□□□□□ -0.36
SFXN1-205ENST00000506963 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
SFXN1-205ENST00000506963 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
SFXN1-205ENST00000506963 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
SFXN1-205ENST00000506963 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
SFXN1-205ENST00000506963 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
SFXN1-205ENST00000506963 SIK1P57059 783 aa12.78□□□□□ -0.36
SFXN1-205ENST00000506963 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
SFXN1-205ENST00000506963 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
SFXN1-205ENST00000506963 C5P01031 1676 aa12.77□□□□□ -0.36
SFXN1-205ENST00000506963 ZNF790Q6PG37 636 aa12.77□□□□□ -0.37
SFXN1-205ENST00000506963 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.37
SFXN1-205ENST00000506963 BTBD11A6QL63 1104 aa12.76□□□□□ -0.37
SFXN1-205ENST00000506963 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
SFXN1-205ENST00000506963 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
SFXN1-205ENST00000506963 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
SFXN1-205ENST00000506963 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
SFXN1-205ENST00000506963 TJP1Q07157 1748 aa12.76□□□□□ -0.37
SFXN1-205ENST00000506963 CHL1O00533 1208 aa12.75□□□□□ -0.37
SFXN1-205ENST00000506963 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
SFXN1-205ENST00000506963 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
SFXN1-205ENST00000506963 QSER1Q2KHR3 1735 aa12.75□□□□□ -0.37
SFXN1-205ENST00000506963 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
SFXN1-205ENST00000506963 HEG1Q9ULI3 1381 aa12.75□□□□□ -0.37
SFXN1-205ENST00000506963 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
SFXN1-205ENST00000506963 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
SFXN1-205ENST00000506963 ITPK1Q13572 414 aa12.74□□□□□ -0.37
SFXN1-205ENST00000506963 NBPF14Q5TI25 921 aa12.74□□□□□ -0.37
SFXN1-205ENST00000506963 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
SFXN1-205ENST00000506963 AKT1S1Q96B36 256 aa12.74□□□□□ -0.37
SFXN1-205ENST00000506963 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
SFXN1-205ENST00000506963 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
SFXN1-205ENST00000506963 IL16Q14005 1332 aa12.73□□□□□ -0.37
SFXN1-205ENST00000506963 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
SFXN1-205ENST00000506963 ZNF496Q96IT1 587 aaPredicted RBP12.73□□□□□ -0.37
SFXN1-205ENST00000506963 FMNL2Q96PY5 1086 aa12.73□□□□□ -0.37
SFXN1-205ENST00000506963 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
SFXN1-205ENST00000506963 ANO8Q9HCE9 1232 aaPredicted RBP12.73□□□□□ -0.37
SFXN1-205ENST00000506963 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
SFXN1-205ENST00000506963 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
SFXN1-205ENST00000506963 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
SFXN1-205ENST00000506963 KCNQ3O43525 872 aa12.72□□□□□ -0.37
SFXN1-205ENST00000506963 KCNQ4P56696 695 aa12.72□□□□□ -0.37
SFXN1-205ENST00000506963 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
SFXN1-205ENST00000506963 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
SFXN1-205ENST00000506963 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
SFXN1-205ENST00000506963 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
SFXN1-205ENST00000506963 MYH14Q7Z406 1995 aaKnown RBP12.72□□□□□ -0.37
SFXN1-205ENST00000506963 EIF4A1P60842 406 aaKnown RBP12.71□□□□□ -0.37
SFXN1-205ENST00000506963 GNAI1P63096 354 aa12.71□□□□□ -0.37
SFXN1-205ENST00000506963 PIAS4Q8N2W9 510 aaPredicted RBP12.71□□□□□ -0.37
SFXN1-205ENST00000506963 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
SFXN1-205ENST00000506963 STK32BQ9NY57 414 aa12.71□□□□□ -0.37
SFXN1-205ENST00000506963 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.37
SFXN1-205ENST00000506963 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
SFXN1-205ENST00000506963 SNRPA1P09661 255 aaKnown RBP12.7□□□□□ -0.38
SFXN1-205ENST00000506963 CYP19A1P11511 503 aaPredicted RBP12.7□□□□□ -0.38
SFXN1-205ENST00000506963 ZNF827Q17R98 1081 aa12.7□□□□□ -0.38
SFXN1-205ENST00000506963 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
SFXN1-205ENST00000506963 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
SFXN1-205ENST00000506963 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
SFXN1-205ENST00000506963 TSPYL4Q9UJ04 414 aa12.7□□□□□ -0.38
SFXN1-205ENST00000506963 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
SFXN1-205ENST00000506963 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
SFXN1-205ENST00000506963 CASZ1Q86V15 1759 aa12.69□□□□□ -0.38
SFXN1-205ENST00000506963 STARD3NLO95772 234 aa12.68□□□□□ -0.38
SFXN1-205ENST00000506963 MBIPQ9NS73 344 aa12.68□□□□□ -0.38
SFXN1-205ENST00000506963 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
SFXN1-205ENST00000506963 HOXB7P09629 217 aa12.67□□□□□ -0.38
SFXN1-205ENST00000506963 ADRA2BP18089 450 aa12.67□□□□□ -0.38
SFXN1-205ENST00000506963 SSFA2P28290 1259 aa12.67□□□□□ -0.38
SFXN1-205ENST00000506963 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms