RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 RBM47A0AV96 593 aaKnown RBP7.89□□□□□ -1.15
SCLT1-207ENST00000506233 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
SCLT1-207ENST00000506233 CWC22Q9HCG8 908 aaKnown RBP7.88□□□□□ -1.15
SCLT1-207ENST00000506233 MYT1LQ9UL68 1186 aa7.88□□□□□ -1.15
SCLT1-207ENST00000506233 PKD1L3Q7Z443 1732 aa7.88□□□□□ -1.15
SCLT1-207ENST00000506233 CHADLQ6NUI6 762 aa7.88□□□□□ -1.15
SCLT1-207ENST00000506233 CABP1Q9NZU7 370 aa7.88□□□□□ -1.15
SCLT1-207ENST00000506233 SETD1BQ9UPS6 1966 aaKnown RBP7.88□□□□□ -1.15
SCLT1-207ENST00000506233 WASLO00401 505 aaPredicted RBP7.88□□□□□ -1.15
SCLT1-207ENST00000506233 MAP3K13O43283 966 aa7.88□□□□□ -1.15
SCLT1-207ENST00000506233 WWC1Q8IX03 1113 aa7.88□□□□□ -1.15
SCLT1-207ENST00000506233 WNK3Q9BYP7 1800 aa7.87□□□□□ -1.15
SCLT1-207ENST00000506233 FCHSD2O94868 740 aa7.87□□□□□ -1.15
SCLT1-207ENST00000506233 IL13P35225 146 aa7.87□□□□□ -1.15
SCLT1-207ENST00000506233 USTQ9Y2C2 406 aa7.87□□□□□ -1.15
SCLT1-207ENST00000506233 ATAD2Q6PL18 1390 aa7.87□□□□□ -1.15
SCLT1-207ENST00000506233 RRP1P56182 461 aaKnown RBP7.87□□□□□ -1.15
SCLT1-207ENST00000506233 LIMD1Q9UGP4 676 aa7.87□□□□□ -1.15
SCLT1-207ENST00000506233 TOGARAM1Q9Y4F4 1720 aa7.86□□□□□ -1.15
SCLT1-207ENST00000506233 GPR37L1O60883 481 aa7.86□□□□□ -1.15
SCLT1-207ENST00000506233 MTHFSP49914 203 aa7.86□□□□□ -1.15
SCLT1-207ENST00000506233 CCDC146Q8IYE0 955 aa7.86□□□□□ -1.15
SCLT1-207ENST00000506233 UBR2Q8IWV8 1755 aa7.86□□□□□ -1.15
SCLT1-207ENST00000506233 NHSL1Q5SYE7 1610 aa7.86□□□□□ -1.15
SCLT1-207ENST00000506233 EVC2Q86UK5 1308 aa7.86□□□□□ -1.15
SCLT1-207ENST00000506233 PLIN1O60240 522 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 MLECQ14165 292 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 CDHR5Q9HBB8 845 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 CRB1P82279 1406 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 DNAJC14Q6Y2X3 702 aaPredicted RBP7.85□□□□□ -1.15
SCLT1-207ENST00000506233 GPCPD1Q9NPB8 672 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 KIF1AQ12756 1690 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 PHACTR3Q96KR7 559 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 SCN11AQ9UI33 1791 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 KDRP35968 1356 aa7.85□□□□□ -1.15
SCLT1-207ENST00000506233 ANKARQ7Z5J8 1434 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 EXOC6Q8TAG9 804 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 STK26Q9P289 416 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 PXDNQ92626 1479 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 ZNF853P0CG23 659 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 RLBP1P12271 317 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 CNGB1Q14028 1251 aaPredicted RBP7.84□□□□□ -1.15
SCLT1-207ENST00000506233 SAFB2Q14151 953 aaKnown RBP eCLIP7.84□□□□□ -1.15
SCLT1-207ENST00000506233 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 PARP4Q9UKK3 1724 aaKnown RBP7.84□□□□□ -1.15
SCLT1-207ENST00000506233 CDCA8Q53HL2 280 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 TMC1Q8TDI8 760 aa7.84□□□□□ -1.15
SCLT1-207ENST00000506233 APAF1O14727 1248 aa7.83□□□□□ -1.16
SCLT1-207ENST00000506233 CLK2P49760 499 aaKnown RBP7.83□□□□□ -1.16
SCLT1-207ENST00000506233 NME9Q86XW9 330 aa7.83□□□□□ -1.16
SCLT1-207ENST00000506233 GGNBP2Q9H3C7 697 aa7.83□□□□□ -1.16
SCLT1-207ENST00000506233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.16
SCLT1-207ENST00000506233 POLR3GLQ9BT43 218 aa7.83□□□□□ -1.16
SCLT1-207ENST00000506233 NPDC1Q9NQX5 325 aaPredicted RBP7.83□□□□□ -1.16
SCLT1-207ENST00000506233 TBX22Q9Y458 520 aa7.83□□□□□ -1.16
SCLT1-207ENST00000506233 UTRNP46939 3433 aa7.83□□□□□ -1.16
SCLT1-207ENST00000506233 BCAR3O75815 825 aa7.83□□□□□ -1.16
SCLT1-207ENST00000506233 FAM217BQ9NTX9 383 aaPredicted RBP7.83□□□□□ -1.16
SCLT1-207ENST00000506233 ERICH6BQ5W0A0 696 aa7.82□□□□□ -1.16
SCLT1-207ENST00000506233 UCN2Q96RP3 112 aa7.82□□□□□ -1.16
SCLT1-207ENST00000506233 COL16A1Q07092 1604 aaPredicted RBP7.82□□□□□ -1.16
SCLT1-207ENST00000506233 B4GALNT3Q6L9W6 998 aa7.82□□□□□ -1.16
SCLT1-207ENST00000506233 KNSTRNQ9Y448 316 aa7.82□□□□□ -1.16
SCLT1-207ENST00000506233 MSH6P52701 1360 aa7.82□□□□□ -1.16
SCLT1-207ENST00000506233 PATL2C9JE40 543 aaKnown RBP7.82□□□□□ -1.16
SCLT1-207ENST00000506233 CSB-PGBD3P0DP91 1061 aa7.82□□□□□ -1.16
SCLT1-207ENST00000506233 NUDT16Q96DE0 195 aaKnown RBP7.81□□□□□ -1.16
SCLT1-207ENST00000506233 EMILIN1Q9Y6C2 1016 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 ZNF16P17020 682 aaPredicted RBP7.81□□□□□ -1.16
SCLT1-207ENST00000506233 KCNA6P17658 529 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 PDE3BQ13370 1112 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 ADGRL3Q9HAR2 1447 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 CLCN1P35523 988 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 BANK1Q8NDB2 785 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 VRTNQ9H8Y1 702 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 ABCC6O95255 1503 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 USP19O94966 1318 aa7.81□□□□□ -1.16
SCLT1-207ENST00000506233 CASZ1Q86V15 1759 aa7.8□□□□□ -1.16
SCLT1-207ENST00000506233 PHLDB3Q6NSJ2 640 aa7.8□□□□□ -1.16
SCLT1-207ENST00000506233 PPP1R12CQ9BZL4 782 aa7.8□□□□□ -1.16
SCLT1-207ENST00000506233 KDM4FA0A1W2PPD8 638 aa7.8□□□□□ -1.16
SCLT1-207ENST00000506233 NUP188Q5SRE5 1749 aa7.8□□□□□ -1.16
SCLT1-207ENST00000506233 CGNL1Q0VF96 1302 aa7.8□□□□□ -1.16
SCLT1-207ENST00000506233 QPCTQ16769 361 aa7.79□□□□□ -1.16
SCLT1-207ENST00000506233 SLC26A8Q96RN1 970 aa7.79□□□□□ -1.16
SCLT1-207ENST00000506233 RCAN3Q9UKA8 241 aa7.79□□□□□ -1.16
SCLT1-207ENST00000506233 ACEP12821 1306 aa7.79□□□□□ -1.16
SCLT1-207ENST00000506233 IGHDP01880 384 aa7.79□□□□□ -1.16
SCLT1-207ENST00000506233 TCP11L2Q8N4U5 519 aa7.79□□□□□ -1.16
SCLT1-207ENST00000506233 PALM3A6NDB9 673 aaPredicted RBP7.79□□□□□ -1.16
SCLT1-207ENST00000506233 TTC21BQ7Z4L5 1316 aa7.79□□□□□ -1.16
SCLT1-207ENST00000506233 COL22A1Q8NFW1 1626 aaPredicted RBP7.78□□□□□ -1.16
SCLT1-207ENST00000506233 PPP4R2Q9NY27 417 aa7.78□□□□□ -1.16
SCLT1-207ENST00000506233 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
SCLT1-207ENST00000506233 RARSP54136 660 aaKnown RBP7.78□□□□□ -1.16
SCLT1-207ENST00000506233 TBC1D2Q9BYX2 928 aa7.78□□□□□ -1.16
SCLT1-207ENST00000506233 TJP1Q07157 1748 aa7.78□□□□□ -1.16
SCLT1-207ENST00000506233 NPHP4O75161 1426 aaPredicted RBP7.78□□□□□ -1.16
SCLT1-207ENST00000506233 NRAPQ86VF7 1730 aa7.78□□□□□ -1.16
SCLT1-207ENST00000506233 FOXK1P85037 733 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms