RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
CSF1R-203ENST00000504875 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
CSF1R-203ENST00000504875 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
CSF1R-203ENST00000504875 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
CSF1R-203ENST00000504875 MAP3K5Q99683 1374 aa11.94□□□□□ -0.5
CSF1R-203ENST00000504875 KCNH5Q8NCM2 988 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 SRCIN1Q9C0H9 1055 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 C9orf78Q9NZ63 289 aaPredicted RBP11.93□□□□□ -0.5
CSF1R-203ENST00000504875 RTL1A6NKG5 1358 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 UBR1Q8IWV7 1749 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 RRP9O43818 475 aaKnown RBP11.93□□□□□ -0.5
CSF1R-203ENST00000504875 ST18O60284 1047 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 TRAK2O60296 914 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 MAP4K4O95819 1239 aaPredicted RBP11.93□□□□□ -0.5
CSF1R-203ENST00000504875 MCCP23508 829 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 USP31Q70CQ4 1352 aa11.93□□□□□ -0.5
CSF1R-203ENST00000504875 GOLGA6L3A6NEY3 463 aa11.92□□□□□ -0.5
CSF1R-203ENST00000504875 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.92□□□□□ -0.5
CSF1R-203ENST00000504875 DDX11L8A8MPP1 907 aa11.92□□□□□ -0.5
CSF1R-203ENST00000504875 RBM25P49756 843 aaKnown RBP11.92□□□□□ -0.5
CSF1R-203ENST00000504875 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
CSF1R-203ENST00000504875 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
CSF1R-203ENST00000504875 IP6K1Q92551 441 aa11.92□□□□□ -0.5
CSF1R-203ENST00000504875 SRGAP3O43295 1099 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 HTATSF1O43719 755 aaKnown RBP11.91□□□□□ -0.5
CSF1R-203ENST00000504875 ATF3P18847 181 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 PI4KAP2A4QPH2 592 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 GCP02774 474 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 RABEP1Q15276 862 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 PI4KAP1Q8N8J0 262 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 ANTXR1Q9H6X2 564 aa11.91□□□□□ -0.5
CSF1R-203ENST00000504875 SETD1AO15047 1707 aaKnown RBP11.9□□□□□ -0.5
CSF1R-203ENST00000504875 PNMA6EA0A0J9YXQ4 647 aa11.9□□□□□ -0.5
CSF1R-203ENST00000504875 ERC2O15083 957 aa11.9□□□□□ -0.5
CSF1R-203ENST00000504875 RBM10P98175 930 aaKnown RBP11.9□□□□□ -0.5
CSF1R-203ENST00000504875 ANKRD24Q8TF21 1146 aa11.9□□□□□ -0.5
CSF1R-203ENST00000504875 KCNQ3O43525 872 aa11.9□□□□□ -0.5
CSF1R-203ENST00000504875 MX1P20591 662 aa11.9□□□□□ -0.5
CSF1R-203ENST00000504875 PDE1AP54750 535 aa11.9□□□□□ -0.5
CSF1R-203ENST00000504875 KRT28Q7Z3Y7 464 aa11.9□□□□□ -0.5
CSF1R-203ENST00000504875 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.51
CSF1R-203ENST00000504875 CRB1P82279 1406 aa11.89□□□□□ -0.51
CSF1R-203ENST00000504875 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
CSF1R-203ENST00000504875 CD2BP2O95400 341 aaKnown RBP11.89□□□□□ -0.51
CSF1R-203ENST00000504875 NEK4P51957 841 aa11.89□□□□□ -0.51
CSF1R-203ENST00000504875 TNPO1Q92973 898 aaKnown RBP11.89□□□□□ -0.51
CSF1R-203ENST00000504875 DLG5Q8TDM6 1919 aa11.89□□□□□ -0.51
CSF1R-203ENST00000504875 MON2Q7Z3U7 1717 aa11.89□□□□□ -0.51
CSF1R-203ENST00000504875 FOXD4L6Q3SYB3 417 aaPredicted RBP11.88□□□□□ -0.51
CSF1R-203ENST00000504875 FOXD4L3Q6VB84 417 aaPredicted RBP11.88□□□□□ -0.51
CSF1R-203ENST00000504875 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
CSF1R-203ENST00000504875 KIAA1211Q6ZU35 1233 aa11.88□□□□□ -0.51
CSF1R-203ENST00000504875 DNAAF4Q8WXU2 420 aa11.88□□□□□ -0.51
CSF1R-203ENST00000504875 KIF24Q5T7B8 1368 aa11.88□□□□□ -0.51
CSF1R-203ENST00000504875 C3P01024 1663 aa11.88□□□□□ -0.51
CSF1R-203ENST00000504875 MYL6BP14649 208 aa11.88□□□□□ -0.51
CSF1R-203ENST00000504875 DDX17Q92841 729 aaKnown RBP11.88□□□□□ -0.51
CSF1R-203ENST00000504875 SNX21Q969T3 373 aa11.88□□□□□ -0.51
CSF1R-203ENST00000504875 SSFA2P28290 1259 aa11.87□□□□□ -0.51
CSF1R-203ENST00000504875 KCNJ4P48050 445 aa11.87□□□□□ -0.51
CSF1R-203ENST00000504875 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
CSF1R-203ENST00000504875 CEP170BQ9Y4F5 1589 aaPredicted RBP11.87□□□□□ -0.51
CSF1R-203ENST00000504875 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
CSF1R-203ENST00000504875 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
CSF1R-203ENST00000504875 TRIM44Q96DX7 344 aaPredicted RBP11.87□□□□□ -0.51
CSF1R-203ENST00000504875 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
CSF1R-203ENST00000504875 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
CSF1R-203ENST00000504875 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
CSF1R-203ENST00000504875 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
CSF1R-203ENST00000504875 MCTP1Q6DN14 999 aa11.86□□□□□ -0.51
CSF1R-203ENST00000504875 USP26Q9BXU7 913 aa11.86□□□□□ -0.51
CSF1R-203ENST00000504875 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
CSF1R-203ENST00000504875 AMOTQ4VCS5 1084 aa11.85□□□□□ -0.51
CSF1R-203ENST00000504875 KNDC1Q76NI1 1749 aa11.85□□□□□ -0.51
CSF1R-203ENST00000504875 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
CSF1R-203ENST00000504875 AKAP12Q02952 1782 aa11.85□□□□□ -0.51
CSF1R-203ENST00000504875 A0A0G2JS52 829 aa11.85□□□□□ -0.51
CSF1R-203ENST00000504875 ANP32BQ92688 251 aaKnown RBP11.85□□□□□ -0.51
CSF1R-203ENST00000504875 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
CSF1R-203ENST00000504875 KDRP35968 1356 aa11.85□□□□□ -0.51
CSF1R-203ENST00000504875 TTC5Q8N0Z6 440 aa11.85□□□□□ -0.51
CSF1R-203ENST00000504875 MAP3K2Q9Y2U5 619 aa11.85□□□□□ -0.51
CSF1R-203ENST00000504875 IFIT2P09913 472 aaKnown RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 EIF4A1P60842 406 aaKnown RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 UPF3BQ9BZI7 483 aaKnown RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 SIL1Q9H173 461 aa11.84□□□□□ -0.51
CSF1R-203ENST00000504875 DBF4Q9UBU7 674 aaPredicted RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 CIZ1Q9ULV3 898 aaPredicted RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
CSF1R-203ENST00000504875 ANKARQ7Z5J8 1434 aa11.84□□□□□ -0.51
CSF1R-203ENST00000504875 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 FER1L4A9Z1Z3 1794 aa11.84□□□□□ -0.51
CSF1R-203ENST00000504875 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 CLASRPQ8N2M8 674 aaKnown RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 RIMS1Q86UR5 1692 aaKnown RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms