RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
USP17L28-201ENST00000504543 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
USP17L28-201ENST00000504543 CDCA7LQ96GN5 454 aa13.3□□□□□ -0.28
USP17L28-201ENST00000504543 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
USP17L28-201ENST00000504543 LY75O60449 1722 aa13.3□□□□□ -0.28
USP17L28-201ENST00000504543 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
USP17L28-201ENST00000504543 DEFB132Q7Z7B7 95 aa13.29□□□□□ -0.28
USP17L28-201ENST00000504543 ACSBG1Q96GR2 724 aa13.29□□□□□ -0.28
USP17L28-201ENST00000504543 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
USP17L28-201ENST00000504543 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
USP17L28-201ENST00000504543 ZNF831Q5JPB2 1677 aa13.29□□□□□ -0.28
USP17L28-201ENST00000504543 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
USP17L28-201ENST00000504543 E9PSI1 815 aa13.28□□□□□ -0.28
USP17L28-201ENST00000504543 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
USP17L28-201ENST00000504543 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
USP17L28-201ENST00000504543 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
USP17L28-201ENST00000504543 PTF1AQ7RTS3 328 aa13.28□□□□□ -0.28
USP17L28-201ENST00000504543 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
USP17L28-201ENST00000504543 CEMIPQ8WUJ3 1361 aa13.28□□□□□ -0.28
USP17L28-201ENST00000504543 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
USP17L28-201ENST00000504543 TMOD3Q9NYL9 352 aa13.28□□□□□ -0.28
USP17L28-201ENST00000504543 RNMTO43148 476 aaKnown RBP13.27□□□□□ -0.29
USP17L28-201ENST00000504543 PIGBQ92521 554 aa13.27□□□□□ -0.29
USP17L28-201ENST00000504543 PPP4R2Q9NY27 417 aa13.27□□□□□ -0.29
USP17L28-201ENST00000504543 CABP4P57796 275 aa13.26□□□□□ -0.29
USP17L28-201ENST00000504543 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
USP17L28-201ENST00000504543 TXNRD1Q16881 649 aa13.26□□□□□ -0.29
USP17L28-201ENST00000504543 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
USP17L28-201ENST00000504543 PROM2Q8N271 834 aa13.26□□□□□ -0.29
USP17L28-201ENST00000504543 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
USP17L28-201ENST00000504543 MAPK8IP3Q9UPT6 1336 aa13.26□□□□□ -0.29
USP17L28-201ENST00000504543 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
USP17L28-201ENST00000504543 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
USP17L28-201ENST00000504543 MPRIPQ6WCQ1 1025 aa13.25□□□□□ -0.29
USP17L28-201ENST00000504543 WDR63Q8IWG1 891 aa13.25□□□□□ -0.29
USP17L28-201ENST00000504543 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
USP17L28-201ENST00000504543 IRX6P78412 446 aaPredicted RBP13.24□□□□□ -0.29
USP17L28-201ENST00000504543 IL17REQ8NFR9 667 aa13.24□□□□□ -0.29
USP17L28-201ENST00000504543 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
USP17L28-201ENST00000504543 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
USP17L28-201ENST00000504543 LGR6Q9HBX8 967 aa13.24□□□□□ -0.29
USP17L28-201ENST00000504543 PALLDQ8WX93 1383 aa13.23□□□□□ -0.29
USP17L28-201ENST00000504543 PAPPAQ13219 1627 aa13.23□□□□□ -0.29
USP17L28-201ENST00000504543 LMOD3Q0VAK6 560 aa13.23□□□□□ -0.29
USP17L28-201ENST00000504543 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
USP17L28-201ENST00000504543 NFATC2IPQ8NCF5 419 aa13.23□□□□□ -0.29
USP17L28-201ENST00000504543 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
USP17L28-201ENST00000504543 TMPOP42166 694 aaKnown RBP13.22□□□□□ -0.29
USP17L28-201ENST00000504543 ATG3Q9NT62 314 aa13.22□□□□□ -0.29
USP17L28-201ENST00000504543 TEFQ10587 303 aa13.21□□□□□ -0.29
USP17L28-201ENST00000504543 IL16Q14005 1332 aa13.21□□□□□ -0.29
USP17L28-201ENST00000504543 BABAM1Q9NWV8 329 aa13.21□□□□□ -0.29
USP17L28-201ENST00000504543 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
USP17L28-201ENST00000504543 QSER1Q2KHR3 1735 aa13.2□□□□□ -0.3
USP17L28-201ENST00000504543 LOC102724428A0A0B4J2F2 783 aa13.2□□□□□ -0.3
USP17L28-201ENST00000504543 SIK1P57059 783 aa13.2□□□□□ -0.3
USP17L28-201ENST00000504543 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
USP17L28-201ENST00000504543 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
USP17L28-201ENST00000504543 LRRC4BQ9NT99 713 aa13.2□□□□□ -0.3
USP17L28-201ENST00000504543 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
USP17L28-201ENST00000504543 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
USP17L28-201ENST00000504543 UBR2Q8IWV8 1755 aa13.19□□□□□ -0.3
USP17L28-201ENST00000504543 RIPK4P57078 832 aa13.19□□□□□ -0.3
USP17L28-201ENST00000504543 C5P01031 1676 aa13.18□□□□□ -0.3
USP17L28-201ENST00000504543 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
USP17L28-201ENST00000504543 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
USP17L28-201ENST00000504543 MYH16Q9H6N6 1097 aa13.18□□□□□ -0.3
USP17L28-201ENST00000504543 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
USP17L28-201ENST00000504543 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
USP17L28-201ENST00000504543 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
USP17L28-201ENST00000504543 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
USP17L28-201ENST00000504543 STK32BQ9NY57 414 aa13.17□□□□□ -0.3
USP17L28-201ENST00000504543 KCPQ6ZWJ8 1503 aa13.16□□□□□ -0.3
USP17L28-201ENST00000504543 CT47B1P0C2W7 299 aaPredicted RBP13.16□□□□□ -0.3
USP17L28-201ENST00000504543 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
USP17L28-201ENST00000504543 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
USP17L28-201ENST00000504543 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
USP17L28-201ENST00000504543 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
USP17L28-201ENST00000504543 MCM10Q7L590 875 aa13.15□□□□□ -0.3
USP17L28-201ENST00000504543 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
USP17L28-201ENST00000504543 COL5A3P25940 1745 aaPredicted RBP13.15□□□□□ -0.3
USP17L28-201ENST00000504543 CNTNAP4Q9C0A0 1308 aa13.15□□□□□ -0.3
USP17L28-201ENST00000504543 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
USP17L28-201ENST00000504543 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
USP17L28-201ENST00000504543 CALD1Q05682 793 aaKnown RBP13.15□□□□□ -0.3
USP17L28-201ENST00000504543 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
USP17L28-201ENST00000504543 SLC4A9Q96Q91 983 aa13.15□□□□□ -0.3
USP17L28-201ENST00000504543 C4BP0C0L5 1744 aa13.15□□□□□ -0.31
USP17L28-201ENST00000504543 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
USP17L28-201ENST00000504543 KDM3BQ7LBC6 1761 aa13.14□□□□□ -0.31
USP17L28-201ENST00000504543 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
USP17L28-201ENST00000504543 FMNL2Q96PY5 1086 aa13.13□□□□□ -0.31
USP17L28-201ENST00000504543 HEG1Q9ULI3 1381 aa13.13□□□□□ -0.31
USP17L28-201ENST00000504543 TJP1Q07157 1748 aa13.13□□□□□ -0.31
USP17L28-201ENST00000504543 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
USP17L28-201ENST00000504543 CASZ1Q86V15 1759 aa13.12□□□□□ -0.31
USP17L28-201ENST00000504543 ITPK1Q13572 414 aa13.12□□□□□ -0.31
USP17L28-201ENST00000504543 DCTN1Q14203 1278 aa13.12□□□□□ -0.31
USP17L28-201ENST00000504543 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
USP17L28-201ENST00000504543 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms