RNA–Protein interactions for RNA: ENST00000503851.5

PTPN20-214, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-214ENST00000503851 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
PTPN20-214ENST00000503851 TAF1LQ8IZX4 1826 aa13.68□□□□□ -0.22
PTPN20-214ENST00000503851 RREB1Q92766 1687 aa13.68□□□□□ -0.22
PTPN20-214ENST00000503851 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
PTPN20-214ENST00000503851 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
PTPN20-214ENST00000503851 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
PTPN20-214ENST00000503851 PROM2Q8N271 834 aa13.67□□□□□ -0.22
PTPN20-214ENST00000503851 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
PTPN20-214ENST00000503851 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
PTPN20-214ENST00000503851 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
PTPN20-214ENST00000503851 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
PTPN20-214ENST00000503851 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
PTPN20-214ENST00000503851 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
PTPN20-214ENST00000503851 PLSCR1O15162 318 aa13.65□□□□□ -0.22
PTPN20-214ENST00000503851 APBA3O96018 575 aa13.65□□□□□ -0.22
PTPN20-214ENST00000503851 CABP4P57796 275 aa13.65□□□□□ -0.22
PTPN20-214ENST00000503851 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
PTPN20-214ENST00000503851 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
PTPN20-214ENST00000503851 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
PTPN20-214ENST00000503851 MYH14Q7Z406 1995 aaKnown RBP13.64□□□□□ -0.23
PTPN20-214ENST00000503851 KCNQ3O43525 872 aa13.64□□□□□ -0.23
PTPN20-214ENST00000503851 NEFMP07197 916 aa13.64□□□□□ -0.23
PTPN20-214ENST00000503851 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
PTPN20-214ENST00000503851 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
PTPN20-214ENST00000503851 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
PTPN20-214ENST00000503851 LRRC4BQ9NT99 713 aa13.63□□□□□ -0.23
PTPN20-214ENST00000503851 TJP1Q07157 1748 aa13.63□□□□□ -0.23
PTPN20-214ENST00000503851 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
PTPN20-214ENST00000503851 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-214ENST00000503851 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
PTPN20-214ENST00000503851 CICQ96RK0 1608 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-214ENST00000503851 KCNQ4P56696 695 aa13.62□□□□□ -0.23
PTPN20-214ENST00000503851 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
PTPN20-214ENST00000503851 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
PTPN20-214ENST00000503851 C5P01031 1676 aa13.61□□□□□ -0.23
PTPN20-214ENST00000503851 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
PTPN20-214ENST00000503851 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
PTPN20-214ENST00000503851 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
PTPN20-214ENST00000503851 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
PTPN20-214ENST00000503851 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
PTPN20-214ENST00000503851 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
PTPN20-214ENST00000503851 BAG6P46379 1132 aa13.6□□□□□ -0.23
PTPN20-214ENST00000503851 TEFQ10587 303 aa13.6□□□□□ -0.23
PTPN20-214ENST00000503851 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-214ENST00000503851 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
PTPN20-214ENST00000503851 ZNF853P0CG23 659 aa13.59□□□□□ -0.23
PTPN20-214ENST00000503851 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
PTPN20-214ENST00000503851 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
PTPN20-214ENST00000503851 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
PTPN20-214ENST00000503851 CHL1O00533 1208 aa13.58□□□□□ -0.24
PTPN20-214ENST00000503851 LMOD3Q0VAK6 560 aa13.58□□□□□ -0.24
PTPN20-214ENST00000503851 ITPK1Q13572 414 aa13.58□□□□□ -0.24
PTPN20-214ENST00000503851 ZNF790Q6PG37 636 aa13.58□□□□□ -0.24
PTPN20-214ENST00000503851 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-214ENST00000503851 ZNF496Q96IT1 587 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-214ENST00000503851 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
PTPN20-214ENST00000503851 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
PTPN20-214ENST00000503851 LOC102724428A0A0B4J2F2 783 aa13.57□□□□□ -0.24
PTPN20-214ENST00000503851 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
PTPN20-214ENST00000503851 SIK1P57059 783 aa13.57□□□□□ -0.24
PTPN20-214ENST00000503851 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
PTPN20-214ENST00000503851 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
PTPN20-214ENST00000503851 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
PTPN20-214ENST00000503851 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
PTPN20-214ENST00000503851 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
PTPN20-214ENST00000503851 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
PTPN20-214ENST00000503851 LINC00116Q8NCU8 138 aa13.55□□□□□ -0.24
PTPN20-214ENST00000503851 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
PTPN20-214ENST00000503851 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
PTPN20-214ENST00000503851 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
PTPN20-214ENST00000503851 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
PTPN20-214ENST00000503851 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
PTPN20-214ENST00000503851 SLC27A3Q5K4L6 730 aa13.54□□□□□ -0.24
PTPN20-214ENST00000503851 AMIGO3Q86WK7 504 aa13.54□□□□□ -0.24
PTPN20-214ENST00000503851 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
PTPN20-214ENST00000503851 QSER1Q2KHR3 1735 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 IL16Q14005 1332 aa13.53□□□□□ -0.24
PTPN20-214ENST00000503851 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
PTPN20-214ENST00000503851 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
PTPN20-214ENST00000503851 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.25
PTPN20-214ENST00000503851 USP16Q9Y5T5 823 aa13.52□□□□□ -0.25
PTPN20-214ENST00000503851 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-214ENST00000503851 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
PTPN20-214ENST00000503851 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
PTPN20-214ENST00000503851 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
PTPN20-214ENST00000503851 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
PTPN20-214ENST00000503851 CYP19A1P11511 503 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-214ENST00000503851 ADRA2BP18089 450 aa13.5□□□□□ -0.25
PTPN20-214ENST00000503851 GNAI1P63096 354 aa13.5□□□□□ -0.25
PTPN20-214ENST00000503851 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN20-214ENST00000503851 INTS5Q6P9B9 1019 aaKnown RBP13.5□□□□□ -0.25
PTPN20-214ENST00000503851 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms