RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 TMOD3Q9NYL9 352 aa14.26□□□□□ -0.13
UBE2D3-212ENST00000502563 GNAT3A8MTJ3 354 aa14.25□□□□□ -0.13
UBE2D3-212ENST00000502563 TXNRD1Q16881 649 aa14.25□□□□□ -0.13
UBE2D3-212ENST00000502563 PIGBQ92521 554 aa14.25□□□□□ -0.13
UBE2D3-212ENST00000502563 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
UBE2D3-212ENST00000502563 KAT6BQ8WYB5 2073 aa14.24□□□□□ -0.13
UBE2D3-212ENST00000502563 RNMTO43148 476 aaKnown RBP14.24□□□□□ -0.13
UBE2D3-212ENST00000502563 SYTL4Q96C24 671 aaPredicted RBP14.24□□□□□ -0.13
UBE2D3-212ENST00000502563 SLC52A2Q9HAB3 445 aa14.24□□□□□ -0.13
UBE2D3-212ENST00000502563 PALLDQ8WX93 1383 aa14.23□□□□□ -0.13
UBE2D3-212ENST00000502563 WDR43Q15061 677 aaKnown RBP eCLIP14.23□□□□□ -0.13
UBE2D3-212ENST00000502563 MPRIPQ6WCQ1 1025 aa14.23□□□□□ -0.13
UBE2D3-212ENST00000502563 VIRMAQ69YN4 1812 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-212ENST00000502563 CABP4P57796 275 aa14.22□□□□□ -0.13
UBE2D3-212ENST00000502563 SIPA1L3O60292 1781 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-212ENST00000502563 MAPK8IP3Q9UPT6 1336 aa14.21□□□□□ -0.13
UBE2D3-212ENST00000502563 NFE2L2Q16236 605 aa14.21□□□□□ -0.13
UBE2D3-212ENST00000502563 NBPF14Q5TI25 921 aa14.21□□□□□ -0.13
UBE2D3-212ENST00000502563 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
UBE2D3-212ENST00000502563 QSER1Q2KHR3 1735 aa14.21□□□□□ -0.14
UBE2D3-212ENST00000502563 IL17REQ8NFR9 667 aa14.2□□□□□ -0.14
UBE2D3-212ENST00000502563 PNISRQ8TF01 805 aaKnown RBP14.2□□□□□ -0.14
UBE2D3-212ENST00000502563 ATG3Q9NT62 314 aa14.2□□□□□ -0.14
UBE2D3-212ENST00000502563 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
UBE2D3-212ENST00000502563 LMOD3Q0VAK6 560 aa14.19□□□□□ -0.14
UBE2D3-212ENST00000502563 NFATC2IPQ8NCF5 419 aa14.19□□□□□ -0.14
UBE2D3-212ENST00000502563 RTF1Q92541 710 aaKnown RBP14.19□□□□□ -0.14
UBE2D3-212ENST00000502563 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
UBE2D3-212ENST00000502563 LRRC4BQ9NT99 713 aa14.19□□□□□ -0.14
UBE2D3-212ENST00000502563 C5P01031 1676 aa14.18□□□□□ -0.14
UBE2D3-212ENST00000502563 LOC102724428A0A0B4J2F2 783 aa14.18□□□□□ -0.14
UBE2D3-212ENST00000502563 SIK1P57059 783 aa14.18□□□□□ -0.14
UBE2D3-212ENST00000502563 VSIG10Q8N0Z9 540 aa14.18□□□□□ -0.14
UBE2D3-212ENST00000502563 CCNL1Q9UK58 526 aaPredicted RBP14.18□□□□□ -0.14
UBE2D3-212ENST00000502563 ASAP1Q9ULH1 1129 aa14.18□□□□□ -0.14
UBE2D3-212ENST00000502563 UBR2Q8IWV8 1755 aa14.18□□□□□ -0.14
UBE2D3-212ENST00000502563 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
UBE2D3-212ENST00000502563 DLG5Q8TDM6 1919 aa14.17□□□□□ -0.14
UBE2D3-212ENST00000502563 TEFQ10587 303 aa14.17□□□□□ -0.14
UBE2D3-212ENST00000502563 SLC15A2Q16348 729 aa14.17□□□□□ -0.14
UBE2D3-212ENST00000502563 BABAM1Q9NWV8 329 aa14.17□□□□□ -0.14
UBE2D3-212ENST00000502563 CCER2I3L3R5 266 aa14.16□□□□□ -0.14
UBE2D3-212ENST00000502563 TMPOP42166 694 aaKnown RBP14.16□□□□□ -0.14
UBE2D3-212ENST00000502563 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
UBE2D3-212ENST00000502563 MRS2Q9HD23 443 aa14.16□□□□□ -0.14
UBE2D3-212ENST00000502563 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
UBE2D3-212ENST00000502563 NGEFQ8N5V2 710 aa14.15□□□□□ -0.14
UBE2D3-212ENST00000502563 ANO8Q9HCE9 1232 aaPredicted RBP14.15□□□□□ -0.14
UBE2D3-212ENST00000502563 STK32BQ9NY57 414 aa14.15□□□□□ -0.14
UBE2D3-212ENST00000502563 COL5A3P25940 1745 aaPredicted RBP14.15□□□□□ -0.14
UBE2D3-212ENST00000502563 CCDC184Q52MB2 194 aa14.14□□□□□ -0.15
UBE2D3-212ENST00000502563 RC3H1Q5TC82 1133 aaKnown RBP14.14□□□□□ -0.15
UBE2D3-212ENST00000502563 ZNF790Q6PG37 636 aa14.14□□□□□ -0.15
UBE2D3-212ENST00000502563 C4BP0C0L5 1744 aa14.14□□□□□ -0.15
UBE2D3-212ENST00000502563 CASZ1Q86V15 1759 aa14.14□□□□□ -0.15
UBE2D3-212ENST00000502563 CNTNAP4Q9C0A0 1308 aa14.14□□□□□ -0.15
UBE2D3-212ENST00000502563 CCDC27Q2M243 656 aa14.13□□□□□ -0.15
UBE2D3-212ENST00000502563 FLAD1Q8NFF5 587 aa14.13□□□□□ -0.15
UBE2D3-212ENST00000502563 ATP6V1AP38606 617 aa14.12□□□□□ -0.15
UBE2D3-212ENST00000502563 RIPK4P57078 832 aa14.12□□□□□ -0.15
UBE2D3-212ENST00000502563 TAF7Q15545 349 aaPredicted RBP14.12□□□□□ -0.15
UBE2D3-212ENST00000502563 SLC16A10Q8TF71 515 aa14.12□□□□□ -0.15
UBE2D3-212ENST00000502563 SLC4A9Q96Q91 983 aa14.12□□□□□ -0.15
UBE2D3-212ENST00000502563 TEX13AQ9BXU3 409 aaPredicted RBP14.12□□□□□ -0.15
UBE2D3-212ENST00000502563 LRP5O75197 1615 aa14.12□□□□□ -0.15
UBE2D3-212ENST00000502563 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
UBE2D3-212ENST00000502563 TJP1Q07157 1748 aa14.11□□□□□ -0.15
UBE2D3-212ENST00000502563 MCM10Q7L590 875 aa14.11□□□□□ -0.15
UBE2D3-212ENST00000502563 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
UBE2D3-212ENST00000502563 KDM3BQ7LBC6 1761 aa14.11□□□□□ -0.15
UBE2D3-212ENST00000502563 HEG1Q9ULI3 1381 aa14.1□□□□□ -0.15
UBE2D3-212ENST00000502563 SSFA2P28290 1259 aa14.1□□□□□ -0.15
UBE2D3-212ENST00000502563 ITPK1Q13572 414 aa14.1□□□□□ -0.15
UBE2D3-212ENST00000502563 R3HDM1Q15032 1099 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-212ENST00000502563 ZNF827Q17R98 1081 aa14.1□□□□□ -0.15
UBE2D3-212ENST00000502563 TRIM35Q9UPQ4 493 aa14.1□□□□□ -0.15
UBE2D3-212ENST00000502563 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
UBE2D3-212ENST00000502563 COL24A1Q17RW2 1714 aa14.1□□□□□ -0.15
UBE2D3-212ENST00000502563 CALD1Q05682 793 aaKnown RBP14.09□□□□□ -0.15
UBE2D3-212ENST00000502563 DIEXFQ68CQ4 756 aaKnown RBP14.09□□□□□ -0.15
UBE2D3-212ENST00000502563 FMNL2Q96PY5 1086 aa14.09□□□□□ -0.15
UBE2D3-212ENST00000502563 APAF1O14727 1248 aa14.08□□□□□ -0.16
UBE2D3-212ENST00000502563 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
UBE2D3-212ENST00000502563 CCDC146Q8IYE0 955 aa14.08□□□□□ -0.16
UBE2D3-212ENST00000502563 LINC00116Q8NCU8 138 aa14.08□□□□□ -0.16
UBE2D3-212ENST00000502563 ZNF496Q96IT1 587 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-212ENST00000502563 PNPLA7Q6ZV29 1317 aa14.08□□□□□ -0.16
UBE2D3-212ENST00000502563 TUBGCP6Q96RT7 1819 aa14.08□□□□□ -0.16
UBE2D3-212ENST00000502563 ABCB7O75027 752 aa14.07□□□□□ -0.16
UBE2D3-212ENST00000502563 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-212ENST00000502563 SLC39A6Q13433 755 aa14.07□□□□□ -0.16
UBE2D3-212ENST00000502563 DCTN1Q14203 1278 aa14.07□□□□□ -0.16
UBE2D3-212ENST00000502563 AK7Q96M32 723 aa14.07□□□□□ -0.16
UBE2D3-212ENST00000502563 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
UBE2D3-212ENST00000502563 TFCP2L1Q9NZI6 479 aa14.07□□□□□ -0.16
UBE2D3-212ENST00000502563 RPS6KA4O75676 772 aa14.06□□□□□ -0.16
UBE2D3-212ENST00000502563 MTFR1LQ9H019 292 aa14.06□□□□□ -0.16
UBE2D3-212ENST00000502563 MYH14Q7Z406 1995 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-212ENST00000502563 CHL1O00533 1208 aa14.05□□□□□ -0.16
UBE2D3-212ENST00000502563 STARD3NLO95772 234 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms