RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 RTF1Q92541 710 aaKnown RBP18.71■□□□□ 0.59
RNF4-202ENST00000502316 RIPK4P57078 832 aa18.7■□□□□ 0.58
RNF4-202ENST00000502316 PAPPAQ13219 1627 aa18.7■□□□□ 0.58
RNF4-202ENST00000502316 EZH2Q15910 746 aaKnown RBP18.69■□□□□ 0.58
RNF4-202ENST00000502316 MCM10Q7L590 875 aa18.69■□□□□ 0.58
RNF4-202ENST00000502316 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
RNF4-202ENST00000502316 SMARCC1Q92922 1105 aaPredicted RBP18.69■□□□□ 0.58
RNF4-202ENST00000502316 PALLDQ8WX93 1383 aa18.68■□□□□ 0.58
RNF4-202ENST00000502316 APAF1O14727 1248 aa18.68■□□□□ 0.58
RNF4-202ENST00000502316 LMOD3Q0VAK6 560 aa18.68■□□□□ 0.58
RNF4-202ENST00000502316 TEFQ10587 303 aa18.68■□□□□ 0.58
RNF4-202ENST00000502316 DCTN1Q14203 1278 aa18.68■□□□□ 0.58
RNF4-202ENST00000502316 PROM2Q8N271 834 aa18.68■□□□□ 0.58
RNF4-202ENST00000502316 ATG3Q9NT62 314 aa18.68■□□□□ 0.58
RNF4-202ENST00000502316 ASAP1Q9ULH1 1129 aa18.68■□□□□ 0.58
RNF4-202ENST00000502316 RRP7AQ9Y3A4 280 aaKnown RBP18.68■□□□□ 0.58
RNF4-202ENST00000502316 NUP188Q5SRE5 1749 aa18.67■□□□□ 0.58
RNF4-202ENST00000502316 TXNRD1Q16881 649 aa18.67■□□□□ 0.58
RNF4-202ENST00000502316 TRIM35Q9UPQ4 493 aa18.67■□□□□ 0.58
RNF4-202ENST00000502316 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
RNF4-202ENST00000502316 ZNF831Q5JPB2 1677 aa18.66■□□□□ 0.58
RNF4-202ENST00000502316 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
RNF4-202ENST00000502316 SLC27A3Q5K4L6 730 aa18.65■□□□□ 0.58
RNF4-202ENST00000502316 UBR2Q8IWV8 1755 aa18.64■□□□□ 0.57
RNF4-202ENST00000502316 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
RNF4-202ENST00000502316 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
RNF4-202ENST00000502316 LRRC4BQ9NT99 713 aa18.63■□□□□ 0.57
RNF4-202ENST00000502316 KCPQ6ZWJ8 1503 aa18.63■□□□□ 0.57
RNF4-202ENST00000502316 CCDC27Q2M243 656 aa18.62■□□□□ 0.57
RNF4-202ENST00000502316 LOC102724428A0A0B4J2F2 783 aa18.61■□□□□ 0.57
RNF4-202ENST00000502316 SIK1P57059 783 aa18.61■□□□□ 0.57
RNF4-202ENST00000502316 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
RNF4-202ENST00000502316 ZNF790Q6PG37 636 aa18.61■□□□□ 0.57
RNF4-202ENST00000502316 CCNL1Q9UK58 526 aaPredicted RBP18.61■□□□□ 0.57
RNF4-202ENST00000502316 KDM3BQ7LBC6 1761 aa18.6■□□□□ 0.57
RNF4-202ENST00000502316 BTBD11A6QL63 1104 aa18.6■□□□□ 0.57
RNF4-202ENST00000502316 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
RNF4-202ENST00000502316 SLC4A9Q96Q91 983 aa18.6■□□□□ 0.57
RNF4-202ENST00000502316 C5P01031 1676 aa18.6■□□□□ 0.57
RNF4-202ENST00000502316 TAF1LQ8IZX4 1826 aa18.59■□□□□ 0.57
RNF4-202ENST00000502316 NGEFQ8N5V2 710 aa18.59■□□□□ 0.57
RNF4-202ENST00000502316 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
RNF4-202ENST00000502316 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.56
RNF4-202ENST00000502316 HMGB2P26583 209 aaKnown RBP18.58■□□□□ 0.56
RNF4-202ENST00000502316 TTC5Q8N0Z6 440 aa18.58■□□□□ 0.56
RNF4-202ENST00000502316 TJP1Q07157 1748 aa18.57■□□□□ 0.56
RNF4-202ENST00000502316 KCNQ4P56696 695 aa18.57■□□□□ 0.56
RNF4-202ENST00000502316 WWC1Q8IX03 1113 aa18.57■□□□□ 0.56
RNF4-202ENST00000502316 COL5A3P25940 1745 aaPredicted RBP18.57■□□□□ 0.56
RNF4-202ENST00000502316 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
RNF4-202ENST00000502316 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
RNF4-202ENST00000502316 ITPK1Q13572 414 aa18.56■□□□□ 0.56
RNF4-202ENST00000502316 VSIG10Q8N0Z9 540 aa18.56■□□□□ 0.56
RNF4-202ENST00000502316 ZNF496Q96IT1 587 aaPredicted RBP18.56■□□□□ 0.56
RNF4-202ENST00000502316 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
RNF4-202ENST00000502316 ANO8Q9HCE9 1232 aaPredicted RBP18.56■□□□□ 0.56
RNF4-202ENST00000502316 KCNQ3O43525 872 aa18.55■□□□□ 0.56
RNF4-202ENST00000502316 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
RNF4-202ENST00000502316 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
RNF4-202ENST00000502316 CHL1O00533 1208 aa18.54■□□□□ 0.56
RNF4-202ENST00000502316 ZNF853P0CG23 659 aa18.54■□□□□ 0.56
RNF4-202ENST00000502316 NBPF14Q5TI25 921 aa18.54■□□□□ 0.56
RNF4-202ENST00000502316 AKT1S1Q96B36 256 aa18.54■□□□□ 0.56
RNF4-202ENST00000502316 CFAP44Q96MT7 982 aa18.54■□□□□ 0.56
RNF4-202ENST00000502316 FMNL2Q96PY5 1086 aa18.54■□□□□ 0.56
RNF4-202ENST00000502316 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
RNF4-202ENST00000502316 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
RNF4-202ENST00000502316 LINC00116Q8NCU8 138 aa18.53■□□□□ 0.56
RNF4-202ENST00000502316 IFT57Q9NWB7 429 aa18.53■□□□□ 0.56
RNF4-202ENST00000502316 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
RNF4-202ENST00000502316 IL16Q14005 1332 aa18.52■□□□□ 0.56
RNF4-202ENST00000502316 ZNF521Q96K83 1311 aa18.52■□□□□ 0.56
RNF4-202ENST00000502316 SLC15A2Q16348 729 aa18.52■□□□□ 0.56
RNF4-202ENST00000502316 ZNF827Q17R98 1081 aa18.52■□□□□ 0.56
RNF4-202ENST00000502316 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.55
RNF4-202ENST00000502316 EIF4A1P60842 406 aaKnown RBP18.51■□□□□ 0.55
RNF4-202ENST00000502316 STK32BQ9NY57 414 aa18.51■□□□□ 0.55
RNF4-202ENST00000502316 CNTNAP4Q9C0A0 1308 aa18.5■□□□□ 0.55
RNF4-202ENST00000502316 GNAI1P63096 354 aa18.5■□□□□ 0.55
RNF4-202ENST00000502316 RC3H1Q5TC82 1133 aaKnown RBP18.5■□□□□ 0.55
RNF4-202ENST00000502316 WDR63Q8IWG1 891 aa18.5■□□□□ 0.55
RNF4-202ENST00000502316 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
RNF4-202ENST00000502316 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
RNF4-202ENST00000502316 TEX13AQ9BXU3 409 aaPredicted RBP18.49■□□□□ 0.55
RNF4-202ENST00000502316 TUBGCP6Q96RT7 1819 aa18.49■□□□□ 0.55
RNF4-202ENST00000502316 MYH14Q7Z406 1995 aaKnown RBP18.48■□□□□ 0.55
RNF4-202ENST00000502316 UBR3Q6ZT12 1888 aa18.48■□□□□ 0.55
RNF4-202ENST00000502316 SNRPA1P09661 255 aaKnown RBP18.48■□□□□ 0.55
RNF4-202ENST00000502316 CYP19A1P11511 503 aaPredicted RBP18.48■□□□□ 0.55
RNF4-202ENST00000502316 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
RNF4-202ENST00000502316 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
RNF4-202ENST00000502316 SRCAPQ6ZRS2 3230 aa18.48■□□□□ 0.55
RNF4-202ENST00000502316 LAMB4A4D0S4 1761 aa18.47■□□□□ 0.55
RNF4-202ENST00000502316 GIGYF1O75420 1035 aaPredicted RBP18.47■□□□□ 0.55
RNF4-202ENST00000502316 CRKLP46109 303 aaKnown RBP18.47■□□□□ 0.55
RNF4-202ENST00000502316 R3HDM1Q15032 1099 aaKnown RBP18.47■□□□□ 0.55
RNF4-202ENST00000502316 STARD3NLO95772 234 aa18.46■□□□□ 0.55
RNF4-202ENST00000502316 AK7Q96M32 723 aa18.46■□□□□ 0.55
RNF4-202ENST00000502316 CASZ1Q86V15 1759 aa18.45■□□□□ 0.54
RNF4-202ENST00000502316 PRAMEF22A3QJZ6 481 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms