RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
LRRC55-201ENST00000497933 BLOC1S2Q6QNY1 142 aa13.22□□□□□ -0.29
LRRC55-201ENST00000497933 SSFA2P28290 1259 aa13.22□□□□□ -0.29
LRRC55-201ENST00000497933 PTPN14Q15678 1187 aa13.22□□□□□ -0.29
LRRC55-201ENST00000497933 LARP1Q6PKG0 1096 aaKnown RBP13.22□□□□□ -0.29
LRRC55-201ENST00000497933 DENND4BO75064 1496 aaPredicted RBP13.21□□□□□ -0.29
LRRC55-201ENST00000497933 CDKL5O76039 1030 aa13.21□□□□□ -0.29
LRRC55-201ENST00000497933 IDI1Q13907 227 aa13.21□□□□□ -0.29
LRRC55-201ENST00000497933 TAF7Q15545 349 aaPredicted RBP13.21□□□□□ -0.29
LRRC55-201ENST00000497933 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
LRRC55-201ENST00000497933 NSD2O96028 1365 aa13.21□□□□□ -0.29
LRRC55-201ENST00000497933 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.3
LRRC55-201ENST00000497933 NEFHP12036 1026 aa13.21□□□□□ -0.3
LRRC55-201ENST00000497933 IGHMBP2P38935 993 aaKnown RBP13.21□□□□□ -0.3
LRRC55-201ENST00000497933 CCDC183Q5T5S1 534 aa13.21□□□□□ -0.3
LRRC55-201ENST00000497933 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.3
LRRC55-201ENST00000497933 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
LRRC55-201ENST00000497933 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
LRRC55-201ENST00000497933 AMOTL2Q9Y2J4 779 aa13.2□□□□□ -0.3
LRRC55-201ENST00000497933 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
LRRC55-201ENST00000497933 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
LRRC55-201ENST00000497933 KIF1BPQ96EK5 621 aa13.2□□□□□ -0.3
LRRC55-201ENST00000497933 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
LRRC55-201ENST00000497933 FKBP4Q02790 459 aaKnown RBP eCLIP13.2□□□□□ -0.3
LRRC55-201ENST00000497933 CCDC102AQ96A19 550 aa13.2□□□□□ -0.3
LRRC55-201ENST00000497933 SEPT7Q16181 437 aaKnown RBP13.2□□□□□ -0.3
LRRC55-201ENST00000497933 FBXO3Q9UK99 471 aa13.19□□□□□ -0.3
LRRC55-201ENST00000497933 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
LRRC55-201ENST00000497933 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
LRRC55-201ENST00000497933 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
LRRC55-201ENST00000497933 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
LRRC55-201ENST00000497933 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
LRRC55-201ENST00000497933 KIF18AQ8NI77 898 aa13.19□□□□□ -0.3
LRRC55-201ENST00000497933 PDRG1Q9NUG6 133 aa13.19□□□□□ -0.3
LRRC55-201ENST00000497933 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
LRRC55-201ENST00000497933 DHX29Q7Z478 1369 aaKnown RBP13.18□□□□□ -0.3
LRRC55-201ENST00000497933 ADGRF5Q8IZF2 1346 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 GIMAP7Q8NHV1 300 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 GTPBP4Q9BZE4 634 aaKnown RBP13.18□□□□□ -0.3
LRRC55-201ENST00000497933 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 NOL7Q9UMY1 257 aaKnown RBP13.18□□□□□ -0.3
LRRC55-201ENST00000497933 ZSCAN12O43309 604 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 PANK2Q9BZ23 570 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
LRRC55-201ENST00000497933 GLRX3O76003 335 aaKnown RBP13.18□□□□□ -0.3
LRRC55-201ENST00000497933 TNNT1P13805 278 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
LRRC55-201ENST00000497933 NME9Q86XW9 330 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 C14orf93Q9H972 538 aaKnown RBP13.18□□□□□ -0.3
LRRC55-201ENST00000497933 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
LRRC55-201ENST00000497933 FANCAO15360 1455 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
LRRC55-201ENST00000497933 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 IL1RAPL2Q9NP60 686 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 SHTN1A0MZ66 631 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 MCM3P25205 808 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 TDO2P48775 406 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 MCM10Q7L590 875 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 EZRP15311 586 aaKnown RBP13.17□□□□□ -0.3
LRRC55-201ENST00000497933 ENOX2Q16206 610 aaKnown RBP13.17□□□□□ -0.3
LRRC55-201ENST00000497933 CRACR2AQ9BSW2 395 aa13.17□□□□□ -0.3
LRRC55-201ENST00000497933 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
LRRC55-201ENST00000497933 STK3Q13188 491 aa13.16□□□□□ -0.3
LRRC55-201ENST00000497933 MAP9Q49MG5 647 aa13.16□□□□□ -0.3
LRRC55-201ENST00000497933 CCDC94Q9BW85 323 aaPredicted RBP13.16□□□□□ -0.3
LRRC55-201ENST00000497933 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
LRRC55-201ENST00000497933 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
LRRC55-201ENST00000497933 SFPQP23246 707 aaKnown RBP eCLIP13.16□□□□□ -0.3
LRRC55-201ENST00000497933 RARSP54136 660 aaKnown RBP13.16□□□□□ -0.3
LRRC55-201ENST00000497933 WASF1Q92558 559 aa13.16□□□□□ -0.3
LRRC55-201ENST00000497933 RAI14Q9P0K7 980 aa13.16□□□□□ -0.3
LRRC55-201ENST00000497933 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
LRRC55-201ENST00000497933 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
LRRC55-201ENST00000497933 CNKSR2Q8WXI2 1034 aa13.16□□□□□ -0.3
LRRC55-201ENST00000497933 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
LRRC55-201ENST00000497933 KDM4AO75164 1064 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 ZSCAN23Q3MJ62 389 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 CWC27Q6UX04 472 aaKnown RBP13.15□□□□□ -0.3
LRRC55-201ENST00000497933 PLEKHH1Q9ULM0 1364 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 NEMFO60524 1076 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 SSH1Q8WYL5 1049 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 CENPHQ9H3R5 247 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 FOXO3O43524 673 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
LRRC55-201ENST00000497933 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
LRRC55-201ENST00000497933 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
LRRC55-201ENST00000497933 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
LRRC55-201ENST00000497933 LRRFIP2Q9Y608 721 aaKnown RBP13.15□□□□□ -0.3
LRRC55-201ENST00000497933 NKTRP30414 1462 aaKnown RBP13.15□□□□□ -0.3
LRRC55-201ENST00000497933 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.31
LRRC55-201ENST00000497933 POLR3GO15318 223 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms