RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 SLC52A2Q9HAB3 445 aa15.58■□□□□ 0.08
MRPL55-234ENST00000497758 ZNF827Q17R98 1081 aa15.57■□□□□ 0.08
MRPL55-234ENST00000497758 RTF1Q92541 710 aaKnown RBP15.57■□□□□ 0.08
MRPL55-234ENST00000497758 RBM42Q9BTD8 480 aaKnown RBP15.57■□□□□ 0.08
MRPL55-234ENST00000497758 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
MRPL55-234ENST00000497758 PAPPAQ13219 1627 aa15.57■□□□□ 0.08
MRPL55-234ENST00000497758 SCN11AQ9UI33 1791 aa15.57■□□□□ 0.08
MRPL55-234ENST00000497758 TEFQ10587 303 aa15.56■□□□□ 0.08
MRPL55-234ENST00000497758 MRC1P22897 1456 aa15.55■□□□□ 0.08
MRPL55-234ENST00000497758 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
MRPL55-234ENST00000497758 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
MRPL55-234ENST00000497758 PTCD1O75127 700 aaKnown RBP15.54■□□□□ 0.08
MRPL55-234ENST00000497758 IL17REQ8NFR9 667 aa15.54■□□□□ 0.08
MRPL55-234ENST00000497758 AK7Q96M32 723 aa15.54■□□□□ 0.08
MRPL55-234ENST00000497758 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
MRPL55-234ENST00000497758 C5P01031 1676 aa15.52■□□□□ 0.08
MRPL55-234ENST00000497758 ADAMTS7Q9UKP4 1686 aa15.52■□□□□ 0.08
MRPL55-234ENST00000497758 HTATSF1O43719 755 aaKnown RBP15.52■□□□□ 0.08
MRPL55-234ENST00000497758 NFE2L2Q16236 605 aa15.52■□□□□ 0.08
MRPL55-234ENST00000497758 TTC5Q8N0Z6 440 aa15.52■□□□□ 0.08
MRPL55-234ENST00000497758 MSH5O43196 834 aa15.51■□□□□ 0.07
MRPL55-234ENST00000497758 ZBTB7AO95365 584 aa15.51■□□□□ 0.07
MRPL55-234ENST00000497758 SLC39A6Q13433 755 aa15.51■□□□□ 0.07
MRPL55-234ENST00000497758 ITPK1Q13572 414 aa15.51■□□□□ 0.07
MRPL55-234ENST00000497758 MCM10Q7L590 875 aa15.51■□□□□ 0.07
MRPL55-234ENST00000497758 LINC00116Q8NCU8 138 aa15.51■□□□□ 0.07
MRPL55-234ENST00000497758 PDGFDQ9GZP0 370 aaPredicted RBP15.51■□□□□ 0.07
MRPL55-234ENST00000497758 SPON1Q9HCB6 807 aa15.51■□□□□ 0.07
MRPL55-234ENST00000497758 CEMIPQ8WUJ3 1361 aa15.5■□□□□ 0.07
MRPL55-234ENST00000497758 CCDC146Q8IYE0 955 aa15.5■□□□□ 0.07
MRPL55-234ENST00000497758 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
MRPL55-234ENST00000497758 PNPLA7Q6ZV29 1317 aa15.49■□□□□ 0.07
MRPL55-234ENST00000497758 C4BP0C0L5 1744 aa15.49■□□□□ 0.07
MRPL55-234ENST00000497758 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
MRPL55-234ENST00000497758 FLAD1Q8NFF5 587 aa15.49■□□□□ 0.07
MRPL55-234ENST00000497758 SLC4A9Q96Q91 983 aa15.49■□□□□ 0.07
MRPL55-234ENST00000497758 VIRMAQ69YN4 1812 aaKnown RBP15.49■□□□□ 0.07
MRPL55-234ENST00000497758 LRP5O75197 1615 aa15.49■□□□□ 0.07
MRPL55-234ENST00000497758 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
MRPL55-234ENST00000497758 BTBD11A6QL63 1104 aa15.48■□□□□ 0.07
MRPL55-234ENST00000497758 GNPATO15228 680 aa15.48■□□□□ 0.07
MRPL55-234ENST00000497758 RUNDC1Q96C34 613 aa15.48■□□□□ 0.07
MRPL55-234ENST00000497758 MTFR1LQ9H019 292 aa15.48■□□□□ 0.07
MRPL55-234ENST00000497758 MRS2Q9HD23 443 aa15.48■□□□□ 0.07
MRPL55-234ENST00000497758 PPP1R1BQ9UD71 204 aaPredicted RBP15.48■□□□□ 0.07
MRPL55-234ENST00000497758 ATF5Q9Y2D1 282 aaPredicted RBP15.48■□□□□ 0.07
MRPL55-234ENST00000497758 TAF1LQ8IZX4 1826 aa15.47■□□□□ 0.07
MRPL55-234ENST00000497758 PHF14O94880 888 aa15.47■□□□□ 0.07
MRPL55-234ENST00000497758 RIPK4P57078 832 aa15.47■□□□□ 0.07
MRPL55-234ENST00000497758 LMOD3Q0VAK6 560 aa15.47■□□□□ 0.07
MRPL55-234ENST00000497758 ZNF790Q6PG37 636 aa15.47■□□□□ 0.07
MRPL55-234ENST00000497758 SLC16A10Q8TF71 515 aa15.47■□□□□ 0.07
MRPL55-234ENST00000497758 ZNF831Q5JPB2 1677 aa15.46■□□□□ 0.07
MRPL55-234ENST00000497758 QSER1Q2KHR3 1735 aa15.46■□□□□ 0.06
MRPL55-234ENST00000497758 CNTNAP4Q9C0A0 1308 aa15.45■□□□□ 0.06
MRPL55-234ENST00000497758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.45■□□□□ 0.06
MRPL55-234ENST00000497758 SSFA2P28290 1259 aa15.45■□□□□ 0.06
MRPL55-234ENST00000497758 TMPOP42166 694 aaKnown RBP15.45■□□□□ 0.06
MRPL55-234ENST00000497758 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
MRPL55-234ENST00000497758 RC3H1Q5TC82 1133 aaKnown RBP15.45■□□□□ 0.06
MRPL55-234ENST00000497758 COL23A1Q86Y22 540 aaPredicted RBP15.45■□□□□ 0.06
MRPL55-234ENST00000497758 FMNL2Q96PY5 1086 aa15.45■□□□□ 0.06
MRPL55-234ENST00000497758 RRP7AQ9Y3A4 280 aaKnown RBP15.45■□□□□ 0.06
MRPL55-234ENST00000497758 RTCBQ9Y3I0 505 aaKnown RBP15.45■□□□□ 0.06
MRPL55-234ENST00000497758 KCPQ6ZWJ8 1503 aa15.44■□□□□ 0.06
MRPL55-234ENST00000497758 CRKLP46109 303 aaKnown RBP15.44■□□□□ 0.06
MRPL55-234ENST00000497758 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-234ENST00000497758 CCDC184Q52MB2 194 aa15.44■□□□□ 0.06
MRPL55-234ENST00000497758 DNAJC10Q8IXB1 793 aa15.44■□□□□ 0.06
MRPL55-234ENST00000497758 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
MRPL55-234ENST00000497758 ZNF496Q96IT1 587 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-234ENST00000497758 THUMPD2Q9BTF0 503 aaKnown RBP15.44■□□□□ 0.06
MRPL55-234ENST00000497758 TUBGCP6Q96RT7 1819 aa15.44■□□□□ 0.06
MRPL55-234ENST00000497758 POLD1P28340 1107 aa15.43■□□□□ 0.06
MRPL55-234ENST00000497758 PNISRQ8TF01 805 aaKnown RBP15.43■□□□□ 0.06
MRPL55-234ENST00000497758 SIPA1L3O60292 1781 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-234ENST00000497758 HEG1Q9ULI3 1381 aa15.42■□□□□ 0.06
MRPL55-234ENST00000497758 STARD3NLO95772 234 aa15.42■□□□□ 0.06
MRPL55-234ENST00000497758 TRAPPC3LQ5T215 181 aa15.42■□□□□ 0.06
MRPL55-234ENST00000497758 SMIM5Q71RC9 77 aa15.42■□□□□ 0.06
MRPL55-234ENST00000497758 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
MRPL55-234ENST00000497758 CCDC87Q9NVE4 849 aa15.42■□□□□ 0.06
MRPL55-234ENST00000497758 DLG5Q8TDM6 1919 aa15.42■□□□□ 0.06
MRPL55-234ENST00000497758 COL5A3P25940 1745 aaPredicted RBP15.41■□□□□ 0.06
MRPL55-234ENST00000497758 TJP1Q07157 1748 aa15.41■□□□□ 0.06
MRPL55-234ENST00000497758 KCNQ3O43525 872 aa15.41■□□□□ 0.06
MRPL55-234ENST00000497758 RPS6KA4O75676 772 aa15.41■□□□□ 0.06
MRPL55-234ENST00000497758 ADRA2BP18089 450 aa15.41■□□□□ 0.06
MRPL55-234ENST00000497758 PTGER2P43116 358 aa15.41■□□□□ 0.06
MRPL55-234ENST00000497758 TEX13AQ9BXU3 409 aaPredicted RBP15.41■□□□□ 0.06
MRPL55-234ENST00000497758 MIS18AQ9NYP9 233 aa15.41■□□□□ 0.06
MRPL55-234ENST00000497758 UBR3Q6ZT12 1888 aa15.41■□□□□ 0.06
MRPL55-234ENST00000497758 UBR2Q8IWV8 1755 aa15.41■□□□□ 0.06
MRPL55-234ENST00000497758 CICQ96RK0 1608 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-234ENST00000497758 CYP19A1P11511 503 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-234ENST00000497758 RFC4P35249 363 aa15.4■□□□□ 0.06
MRPL55-234ENST00000497758 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
MRPL55-234ENST00000497758 APAF1O14727 1248 aa15.39■□□□□ 0.05
MRPL55-234ENST00000497758 INTS5Q6P9B9 1019 aaKnown RBP15.39■□□□□ 0.05
MRPL55-234ENST00000497758 SNRPA1P09661 255 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms