RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 LOC102724428A0A0B4J2F2 783 aa25.52■■□□□ 1.68
CTDSP1-213ENST00000496785 SIK1P57059 783 aa25.52■■□□□ 1.68
CTDSP1-213ENST00000496785 RTF1Q92541 710 aaKnown RBP25.52■■□□□ 1.68
CTDSP1-213ENST00000496785 LGR6Q9HBX8 967 aa25.52■■□□□ 1.68
CTDSP1-213ENST00000496785 TEFQ10587 303 aa25.51■■□□□ 1.67
CTDSP1-213ENST00000496785 HTATSF1O43719 755 aaKnown RBP25.49■■□□□ 1.67
CTDSP1-213ENST00000496785 KCNQ4P56696 695 aa25.48■■□□□ 1.67
CTDSP1-213ENST00000496785 AKT1S1Q96B36 256 aa25.48■■□□□ 1.67
CTDSP1-213ENST00000496785 PLEKHF1Q96S99 279 aa25.48■■□□□ 1.67
CTDSP1-213ENST00000496785 VIRMAQ69YN4 1812 aaKnown RBP25.48■■□□□ 1.67
CTDSP1-213ENST00000496785 C5P01031 1676 aa25.48■■□□□ 1.67
CTDSP1-213ENST00000496785 ATP6V1AP38606 617 aa25.47■■□□□ 1.67
CTDSP1-213ENST00000496785 RBM42Q9BTD8 480 aaKnown RBP25.47■■□□□ 1.67
CTDSP1-213ENST00000496785 TFCP2L1Q9NZI6 479 aa25.47■■□□□ 1.67
CTDSP1-213ENST00000496785 CEMIPQ8WUJ3 1361 aa25.46■■□□□ 1.67
CTDSP1-213ENST00000496785 ZNF831Q5JPB2 1677 aa25.46■■□□□ 1.67
CTDSP1-213ENST00000496785 ZNF827Q17R98 1081 aa25.46■■□□□ 1.67
CTDSP1-213ENST00000496785 IL17REQ8NFR9 667 aa25.45■■□□□ 1.66
CTDSP1-213ENST00000496785 NFE2L2Q16236 605 aa25.44■■□□□ 1.66
CTDSP1-213ENST00000496785 AK7Q96M32 723 aa25.44■■□□□ 1.66
CTDSP1-213ENST00000496785 TAF1LQ8IZX4 1826 aa25.44■■□□□ 1.66
CTDSP1-213ENST00000496785 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
CTDSP1-213ENST00000496785 TTC5Q8N0Z6 440 aa25.43■■□□□ 1.66
CTDSP1-213ENST00000496785 LRP5O75197 1615 aa25.43■■□□□ 1.66
CTDSP1-213ENST00000496785 FLAD1Q8NFF5 587 aa25.42■■□□□ 1.66
CTDSP1-213ENST00000496785 CASZ1Q86V15 1759 aa25.41■■□□□ 1.66
CTDSP1-213ENST00000496785 C4BP0C0L5 1744 aa25.41■■□□□ 1.66
CTDSP1-213ENST00000496785 PTCD1O75127 700 aaKnown RBP25.41■■□□□ 1.66
CTDSP1-213ENST00000496785 SPON1Q9HCB6 807 aa25.41■■□□□ 1.66
CTDSP1-213ENST00000496785 LMOD3Q0VAK6 560 aa25.4■■□□□ 1.66
CTDSP1-213ENST00000496785 RUNDC1Q96C34 613 aa25.4■■□□□ 1.66
CTDSP1-213ENST00000496785 MCM10Q7L590 875 aa25.39■■□□□ 1.66
CTDSP1-213ENST00000496785 SLC16A10Q8TF71 515 aa25.39■■□□□ 1.66
CTDSP1-213ENST00000496785 ADAMTS8Q9UP79 889 aa25.39■■□□□ 1.66
CTDSP1-213ENST00000496785 ITPK1Q13572 414 aa25.38■■□□□ 1.65
CTDSP1-213ENST00000496785 LINC00116Q8NCU8 138 aa25.38■■□□□ 1.65
CTDSP1-213ENST00000496785 PNPLA7Q6ZV29 1317 aa25.37■■□□□ 1.65
CTDSP1-213ENST00000496785 CICQ96RK0 1608 aaPredicted RBP25.37■■□□□ 1.65
CTDSP1-213ENST00000496785 SIPA1L3O60292 1781 aaPredicted RBP25.37■■□□□ 1.65
CTDSP1-213ENST00000496785 SLC39A6Q13433 755 aa25.37■■□□□ 1.65
CTDSP1-213ENST00000496785 MTFR1LQ9H019 292 aa25.37■■□□□ 1.65
CTDSP1-213ENST00000496785 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
CTDSP1-213ENST00000496785 ZNF790Q6PG37 636 aa25.36■■□□□ 1.65
CTDSP1-213ENST00000496785 VSIG10Q8N0Z9 540 aa25.36■■□□□ 1.65
CTDSP1-213ENST00000496785 SLC4A9Q96Q91 983 aa25.36■■□□□ 1.65
CTDSP1-213ENST00000496785 MRS2Q9HD23 443 aa25.36■■□□□ 1.65
CTDSP1-213ENST00000496785 CNTNAP4Q9C0A0 1308 aa25.36■■□□□ 1.65
CTDSP1-213ENST00000496785 SSFA2P28290 1259 aa25.35■■□□□ 1.65
CTDSP1-213ENST00000496785 RC3H1Q5TC82 1133 aaKnown RBP25.35■■□□□ 1.65
CTDSP1-213ENST00000496785 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
CTDSP1-213ENST00000496785 KCPQ6ZWJ8 1503 aa25.34■■□□□ 1.65
CTDSP1-213ENST00000496785 TMPOP42166 694 aaKnown RBP25.34■■□□□ 1.65
CTDSP1-213ENST00000496785 RIPK4P57078 832 aa25.34■■□□□ 1.65
CTDSP1-213ENST00000496785 CCDC146Q8IYE0 955 aa25.34■■□□□ 1.65
CTDSP1-213ENST00000496785 PNISRQ8TF01 805 aaKnown RBP25.34■■□□□ 1.65
CTDSP1-213ENST00000496785 TUBGCP6Q96RT7 1819 aa25.34■■□□□ 1.65
CTDSP1-213ENST00000496785 GNPATO15228 680 aa25.33■■□□□ 1.65
CTDSP1-213ENST00000496785 MSH5O43196 834 aa25.33■■□□□ 1.65
CTDSP1-213ENST00000496785 ZBTB7AO95365 584 aa25.33■■□□□ 1.65
CTDSP1-213ENST00000496785 COL5A3P25940 1745 aaPredicted RBP25.33■■□□□ 1.65
CTDSP1-213ENST00000496785 DCTN1Q14203 1278 aa25.33■■□□□ 1.65
CTDSP1-213ENST00000496785 TAF7Q15545 349 aaPredicted RBP25.33■■□□□ 1.65
CTDSP1-213ENST00000496785 UBR2Q8IWV8 1755 aa25.33■■□□□ 1.65
CTDSP1-213ENST00000496785 FMNL2Q96PY5 1086 aa25.32■■□□□ 1.64
CTDSP1-213ENST00000496785 PDGFDQ9GZP0 370 aaPredicted RBP25.32■■□□□ 1.64
CTDSP1-213ENST00000496785 TEX13AQ9BXU3 409 aaPredicted RBP25.31■■□□□ 1.64
CTDSP1-213ENST00000496785 RTCBQ9Y3I0 505 aaKnown RBP25.31■■□□□ 1.64
CTDSP1-213ENST00000496785 TJP1Q07157 1748 aa25.3■■□□□ 1.64
CTDSP1-213ENST00000496785 UBR3Q6ZT12 1888 aa25.3■■□□□ 1.64
CTDSP1-213ENST00000496785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.29■■□□□ 1.64
CTDSP1-213ENST00000496785 ADRA2BP18089 450 aa25.29■■□□□ 1.64
CTDSP1-213ENST00000496785 COL23A1Q86Y22 540 aaPredicted RBP25.29■■□□□ 1.64
CTDSP1-213ENST00000496785 PPP1R1BQ9UD71 204 aaPredicted RBP25.29■■□□□ 1.64
CTDSP1-213ENST00000496785 HEG1Q9ULI3 1381 aa25.29■■□□□ 1.64
CTDSP1-213ENST00000496785 PHF14O94880 888 aa25.28■■□□□ 1.64
CTDSP1-213ENST00000496785 CRKLP46109 303 aaKnown RBP25.28■■□□□ 1.64
CTDSP1-213ENST00000496785 DNAJC10Q8IXB1 793 aa25.28■■□□□ 1.64
CTDSP1-213ENST00000496785 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
CTDSP1-213ENST00000496785 RPS6KA4O75676 772 aa25.27■■□□□ 1.64
CTDSP1-213ENST00000496785 STARD3NLO95772 234 aa25.27■■□□□ 1.64
CTDSP1-213ENST00000496785 CCDC184Q52MB2 194 aa25.27■■□□□ 1.64
CTDSP1-213ENST00000496785 ATF5Q9Y2D1 282 aaPredicted RBP25.27■■□□□ 1.64
CTDSP1-213ENST00000496785 POLD1P28340 1107 aa25.26■■□□□ 1.63
CTDSP1-213ENST00000496785 NEUROD2Q15784 382 aa25.26■■□□□ 1.63
CTDSP1-213ENST00000496785 TRAPPC3LQ5T215 181 aa25.25■■□□□ 1.63
CTDSP1-213ENST00000496785 CCDC87Q9NVE4 849 aa25.25■■□□□ 1.63
CTDSP1-213ENST00000496785 RRP7AQ9Y3A4 280 aaKnown RBP25.25■■□□□ 1.63
CTDSP1-213ENST00000496785 CYP19A1P11511 503 aaPredicted RBP25.24■■□□□ 1.63
CTDSP1-213ENST00000496785 BABAM1Q9NWV8 329 aa25.24■■□□□ 1.63
CTDSP1-213ENST00000496785 THUMPD2Q9BTF0 503 aaKnown RBP25.23■■□□□ 1.63
CTDSP1-213ENST00000496785 PTGER2P43116 358 aa25.22■■□□□ 1.63
CTDSP1-213ENST00000496785 APAF1O14727 1248 aa25.21■■□□□ 1.63
CTDSP1-213ENST00000496785 KCNQ3O43525 872 aa25.21■■□□□ 1.63
CTDSP1-213ENST00000496785 SNRPA1P09661 255 aaKnown RBP25.21■■□□□ 1.63
CTDSP1-213ENST00000496785 RFC4P35249 363 aa25.2■■□□□ 1.62
CTDSP1-213ENST00000496785 CALD1Q05682 793 aaKnown RBP25.2■■□□□ 1.62
CTDSP1-213ENST00000496785 INTS5Q6P9B9 1019 aaKnown RBP25.2■■□□□ 1.62
CTDSP1-213ENST00000496785 AMIGO3Q86WK7 504 aa25.2■■□□□ 1.62
CTDSP1-213ENST00000496785 SGIP1Q9BQI5 828 aa25.2■■□□□ 1.62
CTDSP1-213ENST00000496785 KDM3BQ7LBC6 1761 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms