RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 SIK1P57059 783 aa10.09□□□□□ -0.79
CDHR3-214ENST00000496633 PPP1R1BQ9UD71 204 aaPredicted RBP10.09□□□□□ -0.79
CDHR3-214ENST00000496633 TOGARAM1Q9Y4F4 1720 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 ZNF316A6NFI3 1004 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-214ENST00000496633 PRKAR2BP31323 418 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 TEFQ10587 303 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 MTHFSDQ2M296 383 aaKnown RBP10.08□□□□□ -0.8
CDHR3-214ENST00000496633 PIAS4Q8N2W9 510 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-214ENST00000496633 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 AK7Q96M32 723 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 SLC52A2Q9HAB3 445 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-214ENST00000496633 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 SCN11AQ9UI33 1791 aa10.08□□□□□ -0.8
CDHR3-214ENST00000496633 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
CDHR3-214ENST00000496633 C5P01031 1676 aa10.07□□□□□ -0.8
CDHR3-214ENST00000496633 RNMTO43148 476 aaKnown RBP10.07□□□□□ -0.8
CDHR3-214ENST00000496633 POLD1P28340 1107 aa10.07□□□□□ -0.8
CDHR3-214ENST00000496633 ATP6V1AP38606 617 aa10.07□□□□□ -0.8
CDHR3-214ENST00000496633 RC3H1Q5TC82 1133 aaKnown RBP10.07□□□□□ -0.8
CDHR3-214ENST00000496633 TTC5Q8N0Z6 440 aa10.07□□□□□ -0.8
CDHR3-214ENST00000496633 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
CDHR3-214ENST00000496633 NFATC2IPQ8NCF5 419 aa10.07□□□□□ -0.8
CDHR3-214ENST00000496633 ATG3Q9NT62 314 aa10.07□□□□□ -0.8
CDHR3-214ENST00000496633 KDM6AO15550 1401 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-214ENST00000496633 SSFA2P28290 1259 aa10.06□□□□□ -0.8
CDHR3-214ENST00000496633 LMOD3Q0VAK6 560 aa10.06□□□□□ -0.8
CDHR3-214ENST00000496633 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDHR3-214ENST00000496633 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-214ENST00000496633 ASAP1Q9ULH1 1129 aa10.06□□□□□ -0.8
CDHR3-214ENST00000496633 MRC1P22897 1456 aa10.05□□□□□ -0.8
CDHR3-214ENST00000496633 PNISRQ8TF01 805 aaKnown RBP10.05□□□□□ -0.8
CDHR3-214ENST00000496633 PRKRIP1Q9H875 184 aaPredicted RBP10.05□□□□□ -0.8
CDHR3-214ENST00000496633 CASZ1Q86V15 1759 aa10.05□□□□□ -0.8
CDHR3-214ENST00000496633 ADAMTS7Q9UKP4 1686 aa10.05□□□□□ -0.8
CDHR3-214ENST00000496633 CNTNAP4Q9C0A0 1308 aa10.05□□□□□ -0.8
CDHR3-214ENST00000496633 FKBP8Q14318 412 aa10.04□□□□□ -0.8
CDHR3-214ENST00000496633 RBM42Q9BTD8 480 aaKnown RBP10.04□□□□□ -0.8
CDHR3-214ENST00000496633 RTCBQ9Y3I0 505 aaKnown RBP10.04□□□□□ -0.8
CDHR3-214ENST00000496633 TAF1LQ8IZX4 1826 aa10.04□□□□□ -0.8
CDHR3-214ENST00000496633 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
CDHR3-214ENST00000496633 CEMIPQ8WUJ3 1361 aa10.03□□□□□ -0.8
CDHR3-214ENST00000496633 MSH5O43196 834 aa10.03□□□□□ -0.8
CDHR3-214ENST00000496633 ANP32CO43423 234 aa10.03□□□□□ -0.8
CDHR3-214ENST00000496633 STARD3NLO95772 234 aa10.03□□□□□ -0.8
CDHR3-214ENST00000496633 ZNF827Q17R98 1081 aa10.03□□□□□ -0.8
CDHR3-214ENST00000496633 NPM2Q86SE8 214 aaKnown RBP10.03□□□□□ -0.8
CDHR3-214ENST00000496633 CICQ96RK0 1608 aaPredicted RBP10.03□□□□□ -0.8
CDHR3-214ENST00000496633 PNPLA7Q6ZV29 1317 aa10.03□□□□□ -0.8
CDHR3-214ENST00000496633 ZBTB7AO95365 584 aa10.02□□□□□ -0.81
CDHR3-214ENST00000496633 TRAPPC3LQ5T215 181 aa10.02□□□□□ -0.81
CDHR3-214ENST00000496633 FMNL2Q96PY5 1086 aa10.02□□□□□ -0.81
CDHR3-214ENST00000496633 LGR6Q9HBX8 967 aa10.02□□□□□ -0.81
CDHR3-214ENST00000496633 VIRMAQ69YN4 1812 aaKnown RBP10.01□□□□□ -0.81
CDHR3-214ENST00000496633 BTBD11A6QL63 1104 aa10.01□□□□□ -0.81
CDHR3-214ENST00000496633 GNPATO15228 680 aa10.01□□□□□ -0.81
CDHR3-214ENST00000496633 PTCD1O75127 700 aaKnown RBP10.01□□□□□ -0.81
CDHR3-214ENST00000496633 RPS6KA4O75676 772 aa10.01□□□□□ -0.81
CDHR3-214ENST00000496633 NFE2L2Q16236 605 aa10.01□□□□□ -0.81
CDHR3-214ENST00000496633 ZNF790Q6PG37 636 aa10.01□□□□□ -0.81
CDHR3-214ENST00000496633 NLGN1Q8N2Q7 840 aa10.01□□□□□ -0.81
CDHR3-214ENST00000496633 ARXQ96QS3 562 aa10.01□□□□□ -0.81
CDHR3-214ENST00000496633 BABAM1Q9NWV8 329 aa10.01□□□□□ -0.81
CDHR3-214ENST00000496633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
CDHR3-214ENST00000496633 RFC4P35249 363 aa10□□□□□ -0.81
CDHR3-214ENST00000496633 TAF7Q15545 349 aaPredicted RBP10□□□□□ -0.81
CDHR3-214ENST00000496633 COL23A1Q86Y22 540 aaPredicted RBP10□□□□□ -0.81
CDHR3-214ENST00000496633 LINC00116Q8NCU8 138 aa10□□□□□ -0.81
CDHR3-214ENST00000496633 IL17REQ8NFR9 667 aa10□□□□□ -0.81
CDHR3-214ENST00000496633 PHACTR3Q96KR7 559 aa10□□□□□ -0.81
CDHR3-214ENST00000496633 PLEKHF1Q96S99 279 aa10□□□□□ -0.81
CDHR3-214ENST00000496633 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
CDHR3-214ENST00000496633 A0A087WZG4 1122 aa9.99□□□□□ -0.81
CDHR3-214ENST00000496633 PTGER2P43116 358 aa9.99□□□□□ -0.81
CDHR3-214ENST00000496633 KCNQ4P56696 695 aa9.99□□□□□ -0.81
CDHR3-214ENST00000496633 CALD1Q05682 793 aaKnown RBP9.99□□□□□ -0.81
CDHR3-214ENST00000496633 ITPK1Q13572 414 aa9.99□□□□□ -0.81
CDHR3-214ENST00000496633 RUNDC1Q96C34 613 aa9.99□□□□□ -0.81
CDHR3-214ENST00000496633 CHMP4AQ9BY43 222 aa9.99□□□□□ -0.81
CDHR3-214ENST00000496633 UBR3Q6ZT12 1888 aa9.99□□□□□ -0.81
CDHR3-214ENST00000496633 COL5A3P25940 1745 aaPredicted RBP9.99□□□□□ -0.81
CDHR3-214ENST00000496633 COL24A1Q17RW2 1714 aa9.99□□□□□ -0.81
CDHR3-214ENST00000496633 CRKLP46109 303 aaKnown RBP9.98□□□□□ -0.81
CDHR3-214ENST00000496633 SGIP1Q9BQI5 828 aa9.98□□□□□ -0.81
CDHR3-214ENST00000496633 CCDC87Q9NVE4 849 aa9.98□□□□□ -0.81
CDHR3-214ENST00000496633 HEG1Q9ULI3 1381 aa9.98□□□□□ -0.81
CDHR3-214ENST00000496633 SIPA1L3O60292 1781 aaPredicted RBP9.97□□□□□ -0.81
CDHR3-214ENST00000496633 UBR2Q8IWV8 1755 aa9.97□□□□□ -0.81
CDHR3-214ENST00000496633 ZPR1O75312 459 aa9.97□□□□□ -0.81
CDHR3-214ENST00000496633 PHF14O94880 888 aa9.97□□□□□ -0.81
CDHR3-214ENST00000496633 SNRPA1P09661 255 aaKnown RBP9.97□□□□□ -0.81
CDHR3-214ENST00000496633 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
CDHR3-214ENST00000496633 TUBGCP6Q96RT7 1819 aa9.97□□□□□ -0.81
CDHR3-214ENST00000496633 RGL2O15211 777 aa9.96□□□□□ -0.82
CDHR3-214ENST00000496633 CYP19A1P11511 503 aaPredicted RBP9.96□□□□□ -0.82
CDHR3-214ENST00000496633 RIPK4P57078 832 aa9.96□□□□□ -0.82
CDHR3-214ENST00000496633 PLCB2Q00722 1185 aa9.96□□□□□ -0.82
CDHR3-214ENST00000496633 SLC4A9Q96Q91 983 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms