RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 ERVK-7P63135 1459 aa10.93□□□□□ -0.66
RPGR-210ENST00000494841 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
RPGR-210ENST00000494841 TNRQ92752 1358 aa10.93□□□□□ -0.66
RPGR-210ENST00000494841 KCNH2Q12809 1159 aa10.93□□□□□ -0.66
RPGR-210ENST00000494841 IDI1Q13907 227 aa10.93□□□□□ -0.66
RPGR-210ENST00000494841 EPS8L1Q8TE68 723 aa10.93□□□□□ -0.66
RPGR-210ENST00000494841 PLA2R1Q13018 1463 aa10.93□□□□□ -0.66
RPGR-210ENST00000494841 RPRD2Q5VT52 1461 aaKnown RBP10.93□□□□□ -0.66
RPGR-210ENST00000494841 NOS1P29475 1434 aa10.92□□□□□ -0.66
RPGR-210ENST00000494841 SYNMO15061 1565 aa10.92□□□□□ -0.66
RPGR-210ENST00000494841 SPATA31D1Q6ZQQ2 1576 aa10.92□□□□□ -0.66
RPGR-210ENST00000494841 NR6A1Q15406 480 aa10.92□□□□□ -0.66
RPGR-210ENST00000494841 PTCRAQ6ISU1 281 aaPredicted RBP10.92□□□□□ -0.66
RPGR-210ENST00000494841 SPHKAPQ2M3C7 1700 aa10.92□□□□□ -0.66
RPGR-210ENST00000494841 UGGT1Q9NYU2 1555 aa10.91□□□□□ -0.66
RPGR-210ENST00000494841 CTHP32929 405 aa10.91□□□□□ -0.66
RPGR-210ENST00000494841 PTPRTO14522 1441 aa10.91□□□□□ -0.66
RPGR-210ENST00000494841 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
RPGR-210ENST00000494841 SIN3AQ96ST3 1273 aa10.89□□□□□ -0.67
RPGR-210ENST00000494841 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
RPGR-210ENST00000494841 SLC52A1Q9NWF4 448 aa10.89□□□□□ -0.67
RPGR-210ENST00000494841 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
RPGR-210ENST00000494841 MYO3AQ8NEV4 1616 aa10.88□□□□□ -0.67
RPGR-210ENST00000494841 APBB1O00213 710 aa10.88□□□□□ -0.67
RPGR-210ENST00000494841 GPR37L1O60883 481 aa10.88□□□□□ -0.67
RPGR-210ENST00000494841 HSPA2P54652 639 aa10.88□□□□□ -0.67
RPGR-210ENST00000494841 PIK3C2BO00750 1634 aa10.87□□□□□ -0.67
RPGR-210ENST00000494841 CLTCL1P53675 1640 aa10.87□□□□□ -0.67
RPGR-210ENST00000494841 MYO5BQ9ULV0 1848 aa10.87□□□□□ -0.67
RPGR-210ENST00000494841 NEUROD1Q13562 356 aa10.87□□□□□ -0.67
RPGR-210ENST00000494841 CCER1Q8TC90 406 aaPredicted RBP10.87□□□□□ -0.67
RPGR-210ENST00000494841 TRPM2O94759 1503 aa10.87□□□□□ -0.67
RPGR-210ENST00000494841 UHRF1BP1Q6BDS2 1440 aa10.86□□□□□ -0.67
RPGR-210ENST00000494841 RGL3Q3MIN7 710 aa10.86□□□□□ -0.67
RPGR-210ENST00000494841 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
RPGR-210ENST00000494841 POM121Q96HA1 1249 aa10.86□□□□□ -0.67
RPGR-210ENST00000494841 TBC1D2BQ9UPU7 963 aa10.86□□□□□ -0.67
RPGR-210ENST00000494841 NDUFB9Q9Y6M9 179 aa10.86□□□□□ -0.67
RPGR-210ENST00000494841 NLRP1Q9C000 1473 aa10.86□□□□□ -0.67
RPGR-210ENST00000494841 CCDC144AA2RUR9 1427 aa10.85□□□□□ -0.67
RPGR-210ENST00000494841 COG6Q9Y2V7 657 aa10.85□□□□□ -0.67
RPGR-210ENST00000494841 A2ML1A8K2U0 1454 aa10.85□□□□□ -0.67
RPGR-210ENST00000494841 CEP170BQ9Y4F5 1589 aaPredicted RBP10.85□□□□□ -0.67
RPGR-210ENST00000494841 UBR1Q8IWV7 1749 aa10.84□□□□□ -0.67
RPGR-210ENST00000494841 KIF1BO60333 1816 aa10.84□□□□□ -0.67
RPGR-210ENST00000494841 TRIM32Q13049 653 aa10.84□□□□□ -0.67
RPGR-210ENST00000494841 ZNF326Q5BKZ1 582 aaKnown RBP10.84□□□□□ -0.67
RPGR-210ENST00000494841 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
RPGR-210ENST00000494841 GDPD2Q9HCC8 539 aa10.84□□□□□ -0.67
RPGR-210ENST00000494841 FKBPLQ9UIM3 349 aa10.84□□□□□ -0.67
RPGR-210ENST00000494841 LMTK3Q96Q04 1460 aa10.84□□□□□ -0.67
RPGR-210ENST00000494841 TMEM131LA2VDJ0 1609 aa10.84□□□□□ -0.67
RPGR-210ENST00000494841 RPIAP49247 311 aa10.83□□□□□ -0.68
RPGR-210ENST00000494841 ZNF142P52746 1687 aaPredicted RBP10.82□□□□□ -0.68
RPGR-210ENST00000494841 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
RPGR-210ENST00000494841 ARMC2Q8NEN0 867 aa10.82□□□□□ -0.68
RPGR-210ENST00000494841 ZC3H4Q9UPT8 1303 aaKnown RBP10.82□□□□□ -0.68
RPGR-210ENST00000494841 ADGRB3O60242 1522 aa10.81□□□□□ -0.68
RPGR-210ENST00000494841 LTKP29376 864 aa10.81□□□□□ -0.68
RPGR-210ENST00000494841 SLC19A1P41440 591 aa10.81□□□□□ -0.68
RPGR-210ENST00000494841 BAP1Q92560 729 aa10.81□□□□□ -0.68
RPGR-210ENST00000494841 CLUAP1Q96AJ1 413 aa10.81□□□□□ -0.68
RPGR-210ENST00000494841 LINC01559Q495D7 138 aa10.8□□□□□ -0.68
RPGR-210ENST00000494841 NBPF14Q5TI25 921 aa10.8□□□□□ -0.68
RPGR-210ENST00000494841 TXNDC2Q86VQ3 553 aa10.8□□□□□ -0.68
RPGR-210ENST00000494841 PNMA1Q8ND90 353 aa10.8□□□□□ -0.68
RPGR-210ENST00000494841 PRM3Q9NNZ6 103 aa10.8□□□□□ -0.68
RPGR-210ENST00000494841 SPATA31E1Q6ZUB1 1445 aa10.8□□□□□ -0.68
RPGR-210ENST00000494841 TMEM2Q9UHN6 1383 aa10.79□□□□□ -0.68
RPGR-210ENST00000494841 IRF5Q13568 498 aa10.79□□□□□ -0.68
RPGR-210ENST00000494841 C14orf37Q86TY3 774 aa10.79□□□□□ -0.68
RPGR-210ENST00000494841 ZNF511Q8NB15 262 aa10.79□□□□□ -0.68
RPGR-210ENST00000494841 GPKOWQ92917 476 aaPredicted RBP eCLIP10.79□□□□□ -0.68
RPGR-210ENST00000494841 PRKD2Q9BZL6 878 aa10.79□□□□□ -0.68
RPGR-210ENST00000494841 KDM5AP29375 1690 aaKnown RBP10.79□□□□□ -0.68
RPGR-210ENST00000494841 RIMS2Q9UQ26 1411 aa10.78□□□□□ -0.68
RPGR-210ENST00000494841 RAD21O60216 631 aa10.78□□□□□ -0.68
RPGR-210ENST00000494841 ABL2P42684 1182 aa10.78□□□□□ -0.68
RPGR-210ENST00000494841 SKOR1P84550 965 aa10.78□□□□□ -0.68
RPGR-210ENST00000494841 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
RPGR-210ENST00000494841 SH3BP2P78314 561 aa10.77□□□□□ -0.69
RPGR-210ENST00000494841 SPRYD7Q5W111 196 aa10.77□□□□□ -0.69
RPGR-210ENST00000494841 SH3BP5LQ7L8J4 393 aa10.77□□□□□ -0.69
RPGR-210ENST00000494841 DCAF11Q8TEB1 546 aa10.77□□□□□ -0.69
RPGR-210ENST00000494841 L3MBTL2Q969R5 705 aa10.77□□□□□ -0.69
RPGR-210ENST00000494841 TIMELESSQ9UNS1 1208 aa10.77□□□□□ -0.69
RPGR-210ENST00000494841 EID1Q9Y6B2 187 aa10.77□□□□□ -0.69
RPGR-210ENST00000494841 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.69
RPGR-210ENST00000494841 STRCQ7RTU9 1775 aa10.77□□□□□ -0.69
RPGR-210ENST00000494841 ARHGAP23Q9P227 1491 aa10.76□□□□□ -0.69
RPGR-210ENST00000494841 SLIT1O75093 1534 aa10.76□□□□□ -0.69
RPGR-210ENST00000494841 A6NJR5 290 aa10.76□□□□□ -0.69
RPGR-210ENST00000494841 PPP1R15AO75807 674 aaPredicted RBP10.76□□□□□ -0.69
RPGR-210ENST00000494841 CD2BP2O95400 341 aaKnown RBP10.76□□□□□ -0.69
RPGR-210ENST00000494841 WNT7BP56706 349 aa10.76□□□□□ -0.69
RPGR-210ENST00000494841 PDXDC2PQ6P474 469 aa10.76□□□□□ -0.69
RPGR-210ENST00000494841 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
RPGR-210ENST00000494841 PPLO60437 1756 aa10.75□□□□□ -0.69
RPGR-210ENST00000494841 NEXMIFQ5QGS0 1516 aa10.75□□□□□ -0.69
RPGR-210ENST00000494841 FOXJ1Q92949 421 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms