RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ABCA3Q99758 1704 aa14.21□□□□□ -0.14
RFC4-214ENST00000494047 K7ELQ4 463 aaPredicted RBP14.21□□□□□ -0.14
RFC4-214ENST00000494047 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.14
RFC4-214ENST00000494047 DDIT3P35638 169 aa14.21□□□□□ -0.14
RFC4-214ENST00000494047 CLEC17AQ6ZS10 378 aa14.21□□□□□ -0.14
RFC4-214ENST00000494047 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.14
RFC4-214ENST00000494047 PXDNLA1KZ92 1463 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 SLIT2O94813 1529 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 FSD2A1L4K1 749 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 REC8O95072 547 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 CCT4P50991 539 aaKnown RBP14.2□□□□□ -0.14
RFC4-214ENST00000494047 NME9Q86XW9 330 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 UNC5CLQ8IV45 518 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 ANKRD44Q8N8A2 993 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 GAS2L2Q8NHY3 880 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 FLT4P35916 1363 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 ATRNO75882 1429 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 BCL9LQ86UU0 1499 aa14.2□□□□□ -0.14
RFC4-214ENST00000494047 LRRC37A3O60309 1634 aa14.19□□□□□ -0.14
RFC4-214ENST00000494047 NWD2Q9ULI1 1742 aa14.19□□□□□ -0.14
RFC4-214ENST00000494047 CHL1O00533 1208 aa14.19□□□□□ -0.14
RFC4-214ENST00000494047 HMOX1P09601 288 aa14.19□□□□□ -0.14
RFC4-214ENST00000494047 KDRP35968 1356 aa14.19□□□□□ -0.14
RFC4-214ENST00000494047 NUCB2P80303 420 aa14.19□□□□□ -0.14
RFC4-214ENST00000494047 CABLES1Q8TDN4 633 aa14.19□□□□□ -0.14
RFC4-214ENST00000494047 PHACTR3Q96KR7 559 aa14.19□□□□□ -0.14
RFC4-214ENST00000494047 CWC22Q9HCG8 908 aaKnown RBP14.19□□□□□ -0.14
RFC4-214ENST00000494047 TRAK2O60296 914 aa14.18□□□□□ -0.14
RFC4-214ENST00000494047 RAB3GAP1Q15042 981 aa14.18□□□□□ -0.14
RFC4-214ENST00000494047 ABTB2Q8N961 1025 aa14.18□□□□□ -0.14
RFC4-214ENST00000494047 SSH2Q76I76 1423 aa14.17□□□□□ -0.14
RFC4-214ENST00000494047 MCM2P49736 904 aa14.17□□□□□ -0.14
RFC4-214ENST00000494047 RTF1Q92541 710 aaKnown RBP14.17□□□□□ -0.14
RFC4-214ENST00000494047 CRYBG1Q9Y4K1 1723 aa14.17□□□□□ -0.14
RFC4-214ENST00000494047 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
RFC4-214ENST00000494047 COL14A1Q05707 1796 aaKnown RBP14.16□□□□□ -0.14
RFC4-214ENST00000494047 ST18O60284 1047 aa14.16□□□□□ -0.14
RFC4-214ENST00000494047 TTC22Q5TAA0 569 aa14.16□□□□□ -0.14
RFC4-214ENST00000494047 TBC1D9Q6ZT07 1266 aa14.16□□□□□ -0.14
RFC4-214ENST00000494047 GJD4Q96KN9 370 aaPredicted RBP14.16□□□□□ -0.14
RFC4-214ENST00000494047 FAM83GA6ND36 823 aa14.15□□□□□ -0.14
RFC4-214ENST00000494047 VPS72Q15906 364 aa14.15□□□□□ -0.14
RFC4-214ENST00000494047 BRPF3Q9ULD4 1205 aa14.15□□□□□ -0.14
RFC4-214ENST00000494047 PLCH1Q4KWH8 1693 aa14.14□□□□□ -0.15
RFC4-214ENST00000494047 EIF4A2Q14240 407 aaKnown RBP14.14□□□□□ -0.15
RFC4-214ENST00000494047 ANP32BQ92688 251 aaKnown RBP14.14□□□□□ -0.15
RFC4-214ENST00000494047 OSBPL3Q9H4L5 887 aa14.14□□□□□ -0.15
RFC4-214ENST00000494047 RGS12O14924 1447 aa14.14□□□□□ -0.15
RFC4-214ENST00000494047 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
RFC4-214ENST00000494047 GNAI3P08754 354 aa14.13□□□□□ -0.15
RFC4-214ENST00000494047 MCCP23508 829 aa14.13□□□□□ -0.15
RFC4-214ENST00000494047 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
RFC4-214ENST00000494047 SRCIN1Q9C0H9 1055 aa14.13□□□□□ -0.15
RFC4-214ENST00000494047 PRDM11Q9NQV5 511 aa14.13□□□□□ -0.15
RFC4-214ENST00000494047 FAM208AQ9UK61 1670 aaKnown RBP14.13□□□□□ -0.15
RFC4-214ENST00000494047 CRB1P82279 1406 aa14.13□□□□□ -0.15
RFC4-214ENST00000494047 PHRF1Q9P1Y6 1649 aaKnown RBP14.13□□□□□ -0.15
RFC4-214ENST00000494047 PEAK1Q9H792 1746 aa14.13□□□□□ -0.15
RFC4-214ENST00000494047 AOX1Q06278 1338 aa14.12□□□□□ -0.15
RFC4-214ENST00000494047 SULT6B1Q6IMI4 303 aa14.12□□□□□ -0.15
RFC4-214ENST00000494047 PLEKHM2Q8IWE5 1019 aa14.12□□□□□ -0.15
RFC4-214ENST00000494047 KLHL34Q8N239 644 aa14.12□□□□□ -0.15
RFC4-214ENST00000494047 TSPYL6Q8N831 410 aa14.12□□□□□ -0.15
RFC4-214ENST00000494047 C8orf58Q8NAV2 365 aa14.12□□□□□ -0.15
RFC4-214ENST00000494047 CPDO75976 1380 aa14.12□□□□□ -0.15
RFC4-214ENST00000494047 NLRP6P59044 892 aa14.11□□□□□ -0.15
RFC4-214ENST00000494047 CEP85Q6P2H3 762 aa14.11□□□□□ -0.15
RFC4-214ENST00000494047 BTG4Q9NY30 223 aa14.11□□□□□ -0.15
RFC4-214ENST00000494047 IGSF1Q8N6C5 1336 aa14.11□□□□□ -0.15
RFC4-214ENST00000494047 GCP02774 474 aa14.1□□□□□ -0.15
RFC4-214ENST00000494047 ANAPC15P60006 121 aa14.1□□□□□ -0.15
RFC4-214ENST00000494047 RRS1Q15050 365 aaKnown RBP14.1□□□□□ -0.15
RFC4-214ENST00000494047 NUTM2GQ5VZR2 741 aa14.1□□□□□ -0.15
RFC4-214ENST00000494047 SIRT2Q8IXJ6 389 aa14.1□□□□□ -0.15
RFC4-214ENST00000494047 KLHL40Q2TBA0 621 aa14.09□□□□□ -0.15
RFC4-214ENST00000494047 CCDC30Q5VVM6 783 aa14.09□□□□□ -0.15
RFC4-214ENST00000494047 KCNH5Q8NCM2 988 aa14.09□□□□□ -0.15
RFC4-214ENST00000494047 TNPO1Q92973 898 aaKnown RBP14.09□□□□□ -0.15
RFC4-214ENST00000494047 HDAC5Q9UQL6 1122 aa14.09□□□□□ -0.15
RFC4-214ENST00000494047 ONECUT3O60422 494 aaPredicted RBP14.09□□□□□ -0.15
RFC4-214ENST00000494047 GRPEL1Q9HAV7 217 aa14.09□□□□□ -0.15
RFC4-214ENST00000494047 CCDC9Q9Y3X0 531 aaKnown RBP14.09□□□□□ -0.15
RFC4-214ENST00000494047 NRAPQ86VF7 1730 aa14.08□□□□□ -0.15
RFC4-214ENST00000494047 ERC2O15083 957 aa14.08□□□□□ -0.16
RFC4-214ENST00000494047 GNAI2P04899 355 aa14.08□□□□□ -0.16
RFC4-214ENST00000494047 HOXB7P09629 217 aa14.08□□□□□ -0.16
RFC4-214ENST00000494047 ZC3H6P61129 1189 aaKnown RBP14.08□□□□□ -0.16
RFC4-214ENST00000494047 KIF2CQ99661 725 aa14.08□□□□□ -0.16
RFC4-214ENST00000494047 THUMPD2Q9BTF0 503 aaKnown RBP14.08□□□□□ -0.16
RFC4-214ENST00000494047 GLI3P10071 1580 aa14.07□□□□□ -0.16
RFC4-214ENST00000494047 PIK3C2AO00443 1686 aa14.07□□□□□ -0.16
RFC4-214ENST00000494047 SLIT3O75094 1523 aa14.07□□□□□ -0.16
RFC4-214ENST00000494047 UPF1Q92900 1129 aaKnown RBP eCLIP14.07□□□□□ -0.16
RFC4-214ENST00000494047 TRIM44Q96DX7 344 aaPredicted RBP14.07□□□□□ -0.16
RFC4-214ENST00000494047 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
RFC4-214ENST00000494047 GSPT1P15170 499 aaKnown RBP14.06□□□□□ -0.16
RFC4-214ENST00000494047 CLCN1P35523 988 aa14.06□□□□□ -0.16
RFC4-214ENST00000494047 IL17RAQ96F46 866 aa14.06□□□□□ -0.16
RFC4-214ENST00000494047 USP26Q9BXU7 913 aa14.06□□□□□ -0.16
RFC4-214ENST00000494047 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms