RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
RHBDF1-211ENST00000493647 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
RHBDF1-211ENST00000493647 BTAF1O14981 1849 aa15.91■□□□□ 0.14
RHBDF1-211ENST00000493647 SLC39A6Q13433 755 aa15.9■□□□□ 0.14
RHBDF1-211ENST00000493647 DEFB132Q7Z7B7 95 aa15.9■□□□□ 0.14
RHBDF1-211ENST00000493647 WWC1Q8IX03 1113 aa15.9■□□□□ 0.14
RHBDF1-211ENST00000493647 KCNQ3O43525 872 aa15.89■□□□□ 0.13
RHBDF1-211ENST00000493647 CCDC125Q86Z20 511 aa15.89■□□□□ 0.13
RHBDF1-211ENST00000493647 MIS18AQ9NYP9 233 aa15.89■□□□□ 0.13
RHBDF1-211ENST00000493647 SIPA1L3O60292 1781 aaPredicted RBP15.89■□□□□ 0.13
RHBDF1-211ENST00000493647 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
RHBDF1-211ENST00000493647 EN1Q05925 392 aaPredicted RBP15.88■□□□□ 0.13
RHBDF1-211ENST00000493647 TAF7Q15545 349 aaPredicted RBP15.88■□□□□ 0.13
RHBDF1-211ENST00000493647 PROM2Q8N271 834 aa15.88■□□□□ 0.13
RHBDF1-211ENST00000493647 CAMKK2Q96RR4 588 aa15.88■□□□□ 0.13
RHBDF1-211ENST00000493647 VIRMAQ69YN4 1812 aaKnown RBP15.88■□□□□ 0.13
RHBDF1-211ENST00000493647 ZNF521Q96K83 1311 aa15.88■□□□□ 0.13
RHBDF1-211ENST00000493647 PAPPAQ13219 1627 aa15.87■□□□□ 0.13
RHBDF1-211ENST00000493647 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
RHBDF1-211ENST00000493647 PLSCR1O15162 318 aa15.87■□□□□ 0.13
RHBDF1-211ENST00000493647 SF3B2Q13435 895 aaKnown RBP15.87■□□□□ 0.13
RHBDF1-211ENST00000493647 KCPQ6ZWJ8 1503 aa15.86■□□□□ 0.13
RHBDF1-211ENST00000493647 BTBD11A6QL63 1104 aa15.86■□□□□ 0.13
RHBDF1-211ENST00000493647 SOCS7O14512 581 aa15.86■□□□□ 0.13
RHBDF1-211ENST00000493647 BAG6P46379 1132 aa15.86■□□□□ 0.13
RHBDF1-211ENST00000493647 EZH2Q15910 746 aaKnown RBP15.86■□□□□ 0.13
RHBDF1-211ENST00000493647 NGEFQ8N5V2 710 aa15.86■□□□□ 0.13
RHBDF1-211ENST00000493647 SMARCC1Q92922 1105 aaPredicted RBP15.86■□□□□ 0.13
RHBDF1-211ENST00000493647 SLC4A9Q96Q91 983 aa15.86■□□□□ 0.13
RHBDF1-211ENST00000493647 CHL1O00533 1208 aa15.85■□□□□ 0.13
RHBDF1-211ENST00000493647 ZNF853P0CG23 659 aa15.85■□□□□ 0.13
RHBDF1-211ENST00000493647 KCNQ4P56696 695 aa15.85■□□□□ 0.13
RHBDF1-211ENST00000493647 ZNF790Q6PG37 636 aa15.85■□□□□ 0.13
RHBDF1-211ENST00000493647 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
RHBDF1-211ENST00000493647 TXNRD1Q16881 649 aa15.84■□□□□ 0.13
RHBDF1-211ENST00000493647 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
RHBDF1-211ENST00000493647 LRRC4BQ9NT99 713 aa15.84■□□□□ 0.13
RHBDF1-211ENST00000493647 LOC102724428A0A0B4J2F2 783 aa15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 SIK1P57059 783 aa15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 WDR63Q8IWG1 891 aa15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 CFAP44Q96MT7 982 aa15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 IFT57Q9NWB7 429 aa15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 TSPYL4Q9UJ04 414 aa15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
RHBDF1-211ENST00000493647 CALD1Q05682 793 aaKnown RBP15.82■□□□□ 0.12
RHBDF1-211ENST00000493647 ITPK1Q13572 414 aa15.82■□□□□ 0.12
RHBDF1-211ENST00000493647 MBIPQ9NS73 344 aa15.82■□□□□ 0.12
RHBDF1-211ENST00000493647 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
RHBDF1-211ENST00000493647 IL16Q14005 1332 aa15.82■□□□□ 0.12
RHBDF1-211ENST00000493647 RGPD3A6NKT7 1758 aaPredicted RBP15.81■□□□□ 0.12
RHBDF1-211ENST00000493647 LY75O60449 1722 aa15.81■□□□□ 0.12
RHBDF1-211ENST00000493647 EIF4A1P60842 406 aaKnown RBP15.81■□□□□ 0.12
RHBDF1-211ENST00000493647 KDM3BQ7LBC6 1761 aa15.81■□□□□ 0.12
RHBDF1-211ENST00000493647 RGPD4Q7Z3J3 1758 aa15.81■□□□□ 0.12
RHBDF1-211ENST00000493647 TTC5Q8N0Z6 440 aa15.81■□□□□ 0.12
RHBDF1-211ENST00000493647 CCNL1Q9UK58 526 aaPredicted RBP15.81■□□□□ 0.12
RHBDF1-211ENST00000493647 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
RHBDF1-211ENST00000493647 HEG1Q9ULI3 1381 aa15.8■□□□□ 0.12
RHBDF1-211ENST00000493647 GNAI1P63096 354 aa15.8■□□□□ 0.12
RHBDF1-211ENST00000493647 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
RHBDF1-211ENST00000493647 PRAMEF22A3QJZ6 481 aa15.79■□□□□ 0.12
RHBDF1-211ENST00000493647 ATP6V1AP38606 617 aa15.79■□□□□ 0.12
RHBDF1-211ENST00000493647 KRT24Q2M2I5 525 aa15.79■□□□□ 0.12
RHBDF1-211ENST00000493647 SLC27A3Q5K4L6 730 aa15.79■□□□□ 0.12
RHBDF1-211ENST00000493647 DNAJC10Q8IXB1 793 aa15.79■□□□□ 0.12
RHBDF1-211ENST00000493647 LINC00116Q8NCU8 138 aa15.79■□□□□ 0.12
RHBDF1-211ENST00000493647 FMNL2Q96PY5 1086 aa15.79■□□□□ 0.12
RHBDF1-211ENST00000493647 RREB1Q92766 1687 aa15.79■□□□□ 0.12
RHBDF1-211ENST00000493647 CDCA7LQ96GN5 454 aa15.78■□□□□ 0.12
RHBDF1-211ENST00000493647 FANCIQ9NVI1 1328 aa15.77■□□□□ 0.12
RHBDF1-211ENST00000493647 GOLGA2Q08379 1002 aa15.77■□□□□ 0.12
RHBDF1-211ENST00000493647 ANO8Q9HCE9 1232 aaPredicted RBP15.77■□□□□ 0.12
RHBDF1-211ENST00000493647 TJP1Q07157 1748 aa15.77■□□□□ 0.11
RHBDF1-211ENST00000493647 SLFN5Q08AF3 891 aa15.76■□□□□ 0.11
RHBDF1-211ENST00000493647 VSIG10Q8N0Z9 540 aa15.76■□□□□ 0.11
RHBDF1-211ENST00000493647 NUP188Q5SRE5 1749 aa15.76■□□□□ 0.11
RHBDF1-211ENST00000493647 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
RHBDF1-211ENST00000493647 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
RHBDF1-211ENST00000493647 GIGYF1O75420 1035 aaPredicted RBP15.75■□□□□ 0.11
RHBDF1-211ENST00000493647 ZNF827Q17R98 1081 aa15.75■□□□□ 0.11
RHBDF1-211ENST00000493647 USP16Q9Y5T5 823 aa15.75■□□□□ 0.11
RHBDF1-211ENST00000493647 ZNF831Q5JPB2 1677 aa15.75■□□□□ 0.11
RHBDF1-211ENST00000493647 SNRPA1P09661 255 aaKnown RBP15.74■□□□□ 0.11
RHBDF1-211ENST00000493647 CYP19A1P11511 503 aaPredicted RBP15.74■□□□□ 0.11
RHBDF1-211ENST00000493647 TRMT2AQ8IZ69 625 aaKnown RBP15.74■□□□□ 0.11
RHBDF1-211ENST00000493647 C8orf58Q8NAV2 365 aa15.74■□□□□ 0.11
RHBDF1-211ENST00000493647 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
RHBDF1-211ENST00000493647 E9PSI1 815 aa15.73■□□□□ 0.11
RHBDF1-211ENST00000493647 AMIGO3Q86WK7 504 aa15.73■□□□□ 0.11
RHBDF1-211ENST00000493647 TSPYL6Q8N831 410 aa15.73■□□□□ 0.11
RHBDF1-211ENST00000493647 MYH16Q9H6N6 1097 aa15.73■□□□□ 0.11
RHBDF1-211ENST00000493647 C5P01031 1676 aa15.73■□□□□ 0.11
RHBDF1-211ENST00000493647 CRKLP46109 303 aaKnown RBP15.72■□□□□ 0.11
RHBDF1-211ENST00000493647 DUSP27Q5VZP5 1158 aa15.72■□□□□ 0.11
RHBDF1-211ENST00000493647 INTS5Q6P9B9 1019 aaKnown RBP15.72■□□□□ 0.11
RHBDF1-211ENST00000493647 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
RHBDF1-211ENST00000493647 YTHDC1Q96MU7 727 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms