RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 ELL2O00472 640 aaPredicted RBP10.35□□□□□ -0.75
FDPS-218ENST00000492887 CHRDL2Q6WN34 429 aa10.35□□□□□ -0.75
FDPS-218ENST00000492887 UNC5CLQ8IV45 518 aa10.35□□□□□ -0.75
FDPS-218ENST00000492887 BCL2L13Q9BXK5 485 aa10.35□□□□□ -0.75
FDPS-218ENST00000492887 SMC4Q9NTJ3 1288 aa10.35□□□□□ -0.75
FDPS-218ENST00000492887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.758e-12■■□□□ 11.6
FDPS-218ENST00000492887 MIS18AQ9NYP9 233 aa10.35□□□□□ -0.75
FDPS-218ENST00000492887 BRWD3Q6RI45 1802 aa10.35□□□□□ -0.75
FDPS-218ENST00000492887 KDM6AO15550 1401 aaPredicted RBP10.34□□□□□ -0.75
FDPS-218ENST00000492887 TNS2Q63HR2 1409 aa10.34□□□□□ -0.75
FDPS-218ENST00000492887 PAPPAQ13219 1627 aa10.34□□□□□ -0.75
FDPS-218ENST00000492887 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
FDPS-218ENST00000492887 TAF7Q15545 349 aaPredicted RBP10.34□□□□□ -0.75
FDPS-218ENST00000492887 TWISTNBQ3B726 338 aaPredicted RBP10.34□□□□□ -0.75
FDPS-218ENST00000492887 IL17REQ8NFR9 667 aa10.34□□□□□ -0.75
FDPS-218ENST00000492887 FRAT1Q92837 279 aaPredicted RBP10.34□□□□□ -0.75
FDPS-218ENST00000492887 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
FDPS-218ENST00000492887 UBR2Q8IWV8 1755 aa10.34□□□□□ -0.75
FDPS-218ENST00000492887 AFF2P51816 1311 aa10.33□□□□□ -0.76
FDPS-218ENST00000492887 SPATA31A1Q5TZJ5 1347 aa10.33□□□□□ -0.76
FDPS-218ENST00000492887 DISP2A7MBM2 1401 aa10.33□□□□□ -0.76
FDPS-218ENST00000492887 CT47B1P0C2W7 299 aaPredicted RBP10.33□□□□□ -0.76
FDPS-218ENST00000492887 CDCA7Q9BWT1 371 aaPredicted RBP10.33□□□□□ -0.76
FDPS-218ENST00000492887 THRAP3Q9Y2W1 955 aaKnown RBP10.33□□□□□ -0.76
FDPS-218ENST00000492887 CEMIPQ8WUJ3 1361 aa10.33□□□□□ -0.76
FDPS-218ENST00000492887 MRC1P22897 1456 aa10.33□□□□□ -0.76
FDPS-218ENST00000492887 SBF2Q86WG5 1849 aa10.33□□□□□ -0.76
FDPS-218ENST00000492887 SPATA31A5Q5VU36 1347 aa10.33□□□□□ -0.76
FDPS-218ENST00000492887 SPATA31A7Q8IWB4 1347 aa10.33□□□□□ -0.76
FDPS-218ENST00000492887 GLI3P10071 1580 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 EXOC5O00471 708 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 PLIN1O60240 522 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 BCAR3O75815 825 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 ZNF853P0CG23 659 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 CABP4P57796 275 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 DDB1Q16531 1140 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 TTC5Q8N0Z6 440 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 DCAF5Q96JK2 942 aa10.32□□□□□ -0.76
FDPS-218ENST00000492887 AFDNP55196 1824 aaKnown RBP10.32□□□□□ -0.76
FDPS-218ENST00000492887 THSD7AQ9UPZ6 1657 aa10.31□□□□□ -0.76
FDPS-218ENST00000492887 CHL1O00533 1208 aa10.31□□□□□ -0.76
FDPS-218ENST00000492887 TCERG1O14776 1098 aaKnown RBP10.31□□□□□ -0.76
FDPS-218ENST00000492887 CYP27B1O15528 508 aa10.31□□□□□ -0.76
FDPS-218ENST00000492887 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
FDPS-218ENST00000492887 POLA2Q14181 598 aa10.31□□□□□ -0.76
FDPS-218ENST00000492887 VPS72Q15906 364 aa10.31□□□□□ -0.76
FDPS-218ENST00000492887 FAM98CQ17RN3 349 aaKnown RBP10.31□□□□□ -0.76
FDPS-218ENST00000492887 N4BP2Q86UW6 1770 aaPredicted RBP10.31□□□□□ -0.76
FDPS-218ENST00000492887 BCL9LQ86UU0 1499 aa10.3□□□□□ -0.76
FDPS-218ENST00000492887 RARSP54136 660 aaKnown RBP10.3□□□□□ -0.76
FDPS-218ENST00000492887 KRT24Q2M2I5 525 aa10.3□□□□□ -0.76
FDPS-218ENST00000492887 TSPYL6Q8N831 410 aa10.3□□□□□ -0.76
FDPS-218ENST00000492887 C8orf58Q8NAV2 365 aa10.3□□□□□ -0.76
FDPS-218ENST00000492887 SLC52A2Q9HAB3 445 aa10.3□□□□□ -0.76
FDPS-218ENST00000492887 BABAM1Q9NWV8 329 aa10.3□□□□□ -0.76
FDPS-218ENST00000492887 KIF16BQ96L93 1317 aa10.3□□□□□ -0.76
FDPS-218ENST00000492887 BTAF1O14981 1849 aa10.29□□□□□ -0.76
FDPS-218ENST00000492887 ALDH1L2Q3SY69 923 aa10.29□□□□□ -0.76
FDPS-218ENST00000492887 FTSJ3Q8IY81 847 aaKnown RBP10.29□□□□□ -0.76
FDPS-218ENST00000492887 FNBP4Q8N3X1 1017 aaPredicted RBP10.29□□□□□ -0.76
FDPS-218ENST00000492887 NECTIN2Q92692 538 aa10.29□□□□□ -0.76
FDPS-218ENST00000492887 ZNF428Q96B54 188 aa10.29□□□□□ -0.76
FDPS-218ENST00000492887 SYTL4Q96C24 671 aaPredicted RBP10.29□□□□□ -0.76
FDPS-218ENST00000492887 STK31Q9BXU1 1019 aa10.29□□□□□ -0.76
FDPS-218ENST00000492887 TMOD3Q9NYL9 352 aa10.29□□□□□ -0.76
FDPS-218ENST00000492887 TRPC5Q9UL62 973 aaPredicted RBP10.29□□□□□ -0.76
FDPS-218ENST00000492887 VAMP4O75379 141 aa10.28□□□□□ -0.76
FDPS-218ENST00000492887 EIF2S2P20042 333 aaKnown RBP10.28□□□□□ -0.76
FDPS-218ENST00000492887 SLC39A6Q13433 755 aa10.28□□□□□ -0.76
FDPS-218ENST00000492887 ZKSCAN2Q63HK3 967 aa10.28□□□□□ -0.76
FDPS-218ENST00000492887 BARGINQ6ZT62 677 aa10.28□□□□□ -0.76
FDPS-218ENST00000492887 NFATC2IPQ8NCF5 419 aa10.28□□□□□ -0.76
FDPS-218ENST00000492887 SSH1Q8WYL5 1049 aa10.28□□□□□ -0.76
FDPS-218ENST00000492887 NHSQ6T4R5 1651 aa10.28□□□□□ -0.76
FDPS-218ENST00000492887 ATRNO75882 1429 aa10.27□□□□□ -0.77
FDPS-218ENST00000492887 IPO8O15397 1037 aaKnown RBP10.27□□□□□ -0.77
FDPS-218ENST00000492887 KCNQ3O43525 872 aa10.27□□□□□ -0.77
FDPS-218ENST00000492887 MS4A1P11836 297 aa10.27□□□□□ -0.77
FDPS-218ENST00000492887 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
FDPS-218ENST00000492887 FBXO41Q8TF61 875 aa10.27□□□□□ -0.77
FDPS-218ENST00000492887 CRBNQ96SW2 442 aa10.27□□□□□ -0.77
FDPS-218ENST00000492887 RNF123Q5XPI4 1314 aa10.27□□□□□ -0.77
FDPS-218ENST00000492887 ERVV-2B6SEH9 535 aa10.26□□□□□ -0.77
FDPS-218ENST00000492887 CCDC30Q5VVM6 783 aa10.26□□□□□ -0.77
FDPS-218ENST00000492887 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
FDPS-218ENST00000492887 NOB1Q9ULX3 412 aaKnown RBP10.26□□□□□ -0.77
FDPS-218ENST00000492887 ARFGEF2Q9Y6D5 1785 aa10.26□□□□□ -0.77
FDPS-218ENST00000492887 TJP1Q07157 1748 aa10.25□□□□□ -0.77
FDPS-218ENST00000492887 EIF4A1P60842 406 aaKnown RBP10.25□□□□□ -0.77
FDPS-218ENST00000492887 ZNF790Q6PG37 636 aa10.25□□□□□ -0.77
FDPS-218ENST00000492887 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
FDPS-218ENST00000492887 ACSBG1Q96GR2 724 aa10.25□□□□□ -0.77
FDPS-218ENST00000492887 GJD4Q96KN9 370 aaPredicted RBP10.25□□□□□ -0.77
FDPS-218ENST00000492887 FMNL2Q96PY5 1086 aa10.25□□□□□ -0.77
FDPS-218ENST00000492887 CHMP4AQ9BY43 222 aa10.25□□□□□ -0.77
FDPS-218ENST00000492887 SOS1Q07889 1333 aaPredicted RBP10.25□□□□□ -0.77
FDPS-218ENST00000492887 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
FDPS-218ENST00000492887 C20orf194Q5TEA3 1177 aa10.24□□□□□ -0.77
FDPS-218ENST00000492887 ERICH6BQ5W0A0 696 aa10.24□□□□□ -0.77
FDPS-218ENST00000492887 ITPRIPQ8IWB1 547 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms