RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 NAP1L5Q96NT1 182 aaPredicted RBP6.33□□□□□ -1.4
FN1-224ENST00000492816 NCOA2Q15596 1464 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 CAGE1Q8TC20 777 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 RCAN3Q9UKA8 241 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 FKBP4Q02790 459 aaKnown RBP eCLIP6.32□□□□□ -1.4
FN1-224ENST00000492816 PHF8Q9UPP1 1060 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 FCHSD2O94868 740 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 IFIT5Q13325 482 aaKnown RBP6.32□□□□□ -1.4
FN1-224ENST00000492816 SASS6Q6UVJ0 657 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 NIM1KQ8IY84 436 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 ATP6V1AP38606 617 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 CCDC178Q5BJE1 867 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 DCPSQ96C86 337 aaKnown RBP6.32□□□□□ -1.4
FN1-224ENST00000492816 NLRP3Q96P20 1036 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 KIF7Q2M1P5 1343 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 CSADQ9Y600 493 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 HSPA5P11021 654 aaKnown RBP6.32□□□□□ -1.4
FN1-224ENST00000492816 ARID5AQ03989 594 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 JAKMIP3Q5VZ66 844 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 ZNF396Q96N95 335 aaPredicted RBP6.32□□□□□ -1.4
FN1-224ENST00000492816 TRAPPC3LQ5T215 181 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 USP21Q9UK80 565 aa6.32□□□□□ -1.4
FN1-224ENST00000492816 STK24Q9Y6E0 443 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 SIN3AQ96ST3 1273 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.31□□□□□ -1.4
FN1-224ENST00000492816 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
FN1-224ENST00000492816 SMCR8Q8TEV9 937 aaPredicted RBP6.31□□□□□ -1.4
FN1-224ENST00000492816 GTF3C6Q969F1 213 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 RUNDC1Q96C34 613 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 TSNARE1Q96NA8 513 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 CABP1Q9NZU7 370 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 CEP131Q9UPN4 1083 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 RBM19Q9Y4C8 960 aaKnown RBP6.31□□□□□ -1.4
FN1-224ENST00000492816 IQCA1Q86XH1 822 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 BICD1Q96G01 975 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 PSMD1Q99460 953 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 DEF6Q9H4E7 631 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 ZEB2O60315 1214 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 TPTE2Q6XPS3 522 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 CCDC91Q7Z6B0 441 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 DZIP1LQ8IYY4 767 aaKnown RBP6.31□□□□□ -1.4
FN1-224ENST00000492816 RAPGEF3O95398 923 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 TSG101Q99816 390 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 PANK3Q9H999 370 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 PEG3Q9GZU2 1588 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 DAPK1P53355 1430 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 UHRF1BP1Q6BDS2 1440 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 RNF41Q9H4P4 317 aaPredicted RBP6.31□□□□□ -1.4
FN1-224ENST00000492816 FOXD4L1Q9NU39 408 aa6.31□□□□□ -1.4
FN1-224ENST00000492816 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.31□□□□□ -1.4
FN1-224ENST00000492816 FGFR1OPO95684 399 aaKnown RBP6.3□□□□□ -1.4
FN1-224ENST00000492816 LIG1P18858 919 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 RABEP1Q15276 862 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 STK11IPQ8N1F8 1099 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 CUX1P39880 1505 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 PLCG2P16885 1265 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 ATP2B1P20020 1258 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 MROH2BQ7Z745 1585 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 FANCAO15360 1455 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 CCDC196A0A1B0GTZ2 297 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 IDH1O75874 414 aaKnown RBP6.3□□□□□ -1.4
FN1-224ENST00000492816 PDE4BQ07343 736 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 SURF6O75683 361 aaKnown RBP6.3□□□□□ -1.4
FN1-224ENST00000492816 NLRP5P59047 1200 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 FAM13BQ9NYF5 915 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 WDR7Q9Y4E6 1490 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 ECM2O94769 699 aaPredicted RBP6.3□□□□□ -1.4
FN1-224ENST00000492816 EXOC4Q96A65 974 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 FMNL2Q96PY5 1086 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 RNF216Q9NWF9 866 aaPredicted RBP6.3□□□□□ -1.4
FN1-224ENST00000492816 CNTLNQ9NXG0 1405 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 HOXD10P28358 340 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 FOSBP53539 338 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 ANKRD1Q15327 319 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 LARP1Q6PKG0 1096 aaKnown RBP6.3□□□□□ -1.4
FN1-224ENST00000492816 CTCFLQ8NI51 663 aaPredicted RBP6.3□□□□□ -1.4
FN1-224ENST00000492816 BCS1LQ9Y276 419 aa6.3□□□□□ -1.4
FN1-224ENST00000492816 CCT4P50991 539 aaKnown RBP6.29□□□□□ -1.4
FN1-224ENST00000492816 SULF1Q8IWU6 871 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 SLC17A8Q8NDX2 589 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 ALS2CR12Q96Q35 445 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 NACA2Q9H009 215 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 PDCP20941 246 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 ZNF526Q8TF50 670 aaPredicted RBP6.29□□□□□ -1.4
FN1-224ENST00000492816 MTIF3Q9H2K0 278 aaKnown RBP6.29□□□□□ -1.4
FN1-224ENST00000492816 ANKRD30BQ9BXX2 1392 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 ATP5J2-PTCD1G3V325 749 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 SLC4A8Q2Y0W8 1093 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 FOXO3O43524 673 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 GNAI2P04899 355 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 ZNF569Q5MCW4 686 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 LARGE2Q8N3Y3 721 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 PPP2R3CQ969Q6 453 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 LBHD1Q9BQE6 289 aaPredicted RBP6.29□□□□□ -1.4
FN1-224ENST00000492816 RTEL1Q9NZ71 1219 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 GNAT3A8MTJ3 354 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 FERP16591 822 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 KIF5BP33176 963 aa6.29□□□□□ -1.4
FN1-224ENST00000492816 TOP2AP11388 1531 aaKnown RBP6.29□□□□□ -1.4
FN1-224ENST00000492816 USP47Q96K76 1375 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms