RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 FSD2A1L4K1 749 aa18.46■□□□□ 0.55
TNFRSF1B-203ENST00000492361 ZSCAN23Q3MJ62 389 aa18.46■□□□□ 0.55
TNFRSF1B-203ENST00000492361 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.55
TNFRSF1B-203ENST00000492361 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PNPLA6Q8IY17 1366 aa18.46■□□□□ 0.55
TNFRSF1B-203ENST00000492361 ZNF530Q6P9A1 599 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1B-203ENST00000492361 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
TNFRSF1B-203ENST00000492361 CHPF2Q9P2E5 772 aa18.45■□□□□ 0.54
TNFRSF1B-203ENST00000492361 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1B-203ENST00000492361 HSP90AA2PQ14568 343 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1B-203ENST00000492361 ZC3H6P61129 1189 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1B-203ENST00000492361 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
TNFRSF1B-203ENST00000492361 FAM13BQ9NYF5 915 aa18.44■□□□□ 0.54
TNFRSF1B-203ENST00000492361 FERMT3Q86UX7 667 aa18.44■□□□□ 0.54
TNFRSF1B-203ENST00000492361 NBPF7P0C2Y1 421 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1B-203ENST00000492361 KCNA6P17658 529 aa18.43■□□□□ 0.54
TNFRSF1B-203ENST00000492361 FGD1P98174 961 aa18.43■□□□□ 0.54
TNFRSF1B-203ENST00000492361 SETBP1Q9Y6X0 1596 aa18.43■□□□□ 0.54
TNFRSF1B-203ENST00000492361 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
TNFRSF1B-203ENST00000492361 STK3Q13188 491 aa18.43■□□□□ 0.54
TNFRSF1B-203ENST00000492361 RBSNQ9H1K0 784 aa18.43■□□□□ 0.54
TNFRSF1B-203ENST00000492361 AK9Q5TCS8 1911 aa18.43■□□□□ 0.54
TNFRSF1B-203ENST00000492361 ESYT1Q9BSJ8 1104 aa18.42■□□□□ 0.54
TNFRSF1B-203ENST00000492361 PTPRCP08575 1304 aa18.42■□□□□ 0.54
TNFRSF1B-203ENST00000492361 CCDC8Q9H0W5 538 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1B-203ENST00000492361 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
TNFRSF1B-203ENST00000492361 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
TNFRSF1B-203ENST00000492361 ZNF830Q96NB3 372 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 KLHL40Q2TBA0 621 aa18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 ALKQ9UM73 1620 aa18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 TNRQ92752 1358 aa18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 BTBD11A6QL63 1104 aa18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 CWF19L2Q2TBE0 894 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 C1orf141Q5JVX7 400 aa18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 KIAA1210Q9ULL0 1709 aa18.41■□□□□ 0.54
TNFRSF1B-203ENST00000492361 CPS1P31327 1500 aa18.4■□□□□ 0.54
TNFRSF1B-203ENST00000492361 ARHGEF40Q8TER5 1519 aa18.4■□□□□ 0.54
TNFRSF1B-203ENST00000492361 PIK3C2BO00750 1634 aa18.4■□□□□ 0.54
TNFRSF1B-203ENST00000492361 SLC39A6Q13433 755 aa18.4■□□□□ 0.54
TNFRSF1B-203ENST00000492361 CCDC83Q8IWF9 413 aa18.4■□□□□ 0.54
TNFRSF1B-203ENST00000492361 KLHDC4Q8TBB5 520 aa18.4■□□□□ 0.54
TNFRSF1B-203ENST00000492361 LMTK2Q8IWU2 1503 aa18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CASTP20810 708 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CHMLP26374 656 aa18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 FBXW7Q969H0 707 aa18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 COL3A1P02461 1466 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 PPLO60437 1756 aa18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 PRPF40BQ6NWY9 871 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 NECAB1Q8N987 351 aa18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 LMBRD1Q9NUN5 540 aa18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 SMC3Q9UQE7 1217 aa18.39■□□□□ 0.53
TNFRSF1B-203ENST00000492361 PRAMEF22A3QJZ6 481 aa18.38■□□□□ 0.53
TNFRSF1B-203ENST00000492361 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
TNFRSF1B-203ENST00000492361 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
TNFRSF1B-203ENST00000492361 PTMSP20962 102 aa18.38■□□□□ 0.53
TNFRSF1B-203ENST00000492361 USP44Q9H0E7 712 aa18.38■□□□□ 0.53
TNFRSF1B-203ENST00000492361 BOLA2Q9H3K6 86 aa18.38■□□□□ 0.53
TNFRSF1B-203ENST00000492361 TMEM63CQ9P1W3 806 aa18.38■□□□□ 0.53
TNFRSF1B-203ENST00000492361 GADD45BO75293 160 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 AACSQ86V21 672 aa18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 GPT2Q8TD30 523 aa18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 JAKMIP1Q96N16 626 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 HOXC9P31274 260 aa18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 ATP8B2P98198 1209 aa18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 RHPN1Q8TCX5 695 aa18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 IL25Q9H293 177 aa18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 ZC3H13Q5T200 1668 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1B-203ENST00000492361 PIK3R4Q99570 1358 aa18.36■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CLCN1P35523 988 aa18.36■□□□□ 0.53
TNFRSF1B-203ENST00000492361 NEO1Q92859 1461 aa18.36■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CCDC173Q0VFZ6 552 aa18.36■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CWC22Q9HCG8 908 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1B-203ENST00000492361 RIC3Q7Z5B4 369 aa18.36■□□□□ 0.53
TNFRSF1B-203ENST00000492361 A2ML1A8K2U0 1454 aa18.36■□□□□ 0.53
TNFRSF1B-203ENST00000492361 SIGLEC1Q9BZZ2 1709 aa18.35■□□□□ 0.53
TNFRSF1B-203ENST00000492361 GOLGA6L4A6NEF3 574 aa18.35■□□□□ 0.53
TNFRSF1B-203ENST00000492361 KDM4AO75164 1064 aa18.35■□□□□ 0.53
TNFRSF1B-203ENST00000492361 FAM173BQ6P4H8 233 aa18.35■□□□□ 0.53
TNFRSF1B-203ENST00000492361 BRPF1P55201 1214 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CNPY2Q9Y2B0 182 aa18.35■□□□□ 0.53
TNFRSF1B-203ENST00000492361 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 NBPF6Q5VWK0 638 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 SPC24Q8NBT2 197 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 NBPF4Q96M43 638 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 MAP3K2Q9Y2U5 619 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 DIP2CQ9Y2E4 1556 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 ARHGEF28Q8N1W1 1705 aaKnown RBP18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 DNAAF4Q8WXU2 420 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 ZDHHC9Q9Y397 364 aa18.34■□□□□ 0.53
TNFRSF1B-203ENST00000492361 HSP90B1P14625 803 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1B-203ENST00000492361 CAMK4Q16566 473 aa18.33■□□□□ 0.52
TNFRSF1B-203ENST00000492361 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.52
TNFRSF1B-203ENST00000492361 SOS1Q07889 1333 aaPredicted RBP18.33■□□□□ 0.52
TNFRSF1B-203ENST00000492361 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms