RNA–Protein interactions for RNA: ENST00000492146.1

SFMBT1-207, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 3

Gene SFMBT1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-207ENST00000492146 APAF1O14727 1248 aa12.4□□□□□ -0.42
SFMBT1-207ENST00000492146 TEFQ10587 303 aa12.4□□□□□ -0.42
SFMBT1-207ENST00000492146 POTEAQ6S8J7 498 aa12.4□□□□□ -0.42
SFMBT1-207ENST00000492146 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
SFMBT1-207ENST00000492146 IL16Q14005 1332 aa12.39□□□□□ -0.43
SFMBT1-207ENST00000492146 CCDC125Q86Z20 511 aa12.39□□□□□ -0.43
SFMBT1-207ENST00000492146 CCDC146Q8IYE0 955 aa12.39□□□□□ -0.43
SFMBT1-207ENST00000492146 CYP27B1O15528 508 aa12.38□□□□□ -0.43
SFMBT1-207ENST00000492146 CABP4P57796 275 aa12.37□□□□□ -0.43
SFMBT1-207ENST00000492146 GNAI1P63096 354 aa12.37□□□□□ -0.43
SFMBT1-207ENST00000492146 SMARCC1Q92922 1105 aaPredicted RBP12.37□□□□□ -0.43
SFMBT1-207ENST00000492146 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
SFMBT1-207ENST00000492146 CEMIPQ8WUJ3 1361 aa12.36□□□□□ -0.43
SFMBT1-207ENST00000492146 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
SFMBT1-207ENST00000492146 TAF7Q15545 349 aaPredicted RBP12.36□□□□□ -0.43
SFMBT1-207ENST00000492146 MYH16Q9H6N6 1097 aa12.36□□□□□ -0.43
SFMBT1-207ENST00000492146 LRRC37A3O60309 1634 aa12.36□□□□□ -0.43
SFMBT1-207ENST00000492146 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
SFMBT1-207ENST00000492146 HNRNPUQ00839 825 aaKnown RBP eCLIP12.35□□□□□ -0.43
SFMBT1-207ENST00000492146 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
SFMBT1-207ENST00000492146 WWC1Q8IX03 1113 aa12.35□□□□□ -0.43
SFMBT1-207ENST00000492146 MARCH10Q8NA82 808 aaPredicted RBP12.35□□□□□ -0.43
SFMBT1-207ENST00000492146 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
SFMBT1-207ENST00000492146 TMOD3Q9NYL9 352 aa12.35□□□□□ -0.43
SFMBT1-207ENST00000492146 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
SFMBT1-207ENST00000492146 GOLGA2Q08379 1002 aa12.34□□□□□ -0.43
SFMBT1-207ENST00000492146 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
SFMBT1-207ENST00000492146 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
SFMBT1-207ENST00000492146 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
SFMBT1-207ENST00000492146 IFT57Q9NWB7 429 aa12.34□□□□□ -0.43
SFMBT1-207ENST00000492146 E9PSI1 815 aa12.33□□□□□ -0.44
SFMBT1-207ENST00000492146 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
SFMBT1-207ENST00000492146 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
SFMBT1-207ENST00000492146 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
SFMBT1-207ENST00000492146 RGS12O14924 1447 aa12.33□□□□□ -0.44
SFMBT1-207ENST00000492146 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
SFMBT1-207ENST00000492146 IL17REQ8NFR9 667 aa12.32□□□□□ -0.44
SFMBT1-207ENST00000492146 TEX13AQ9BXU3 409 aaPredicted RBP12.32□□□□□ -0.44
SFMBT1-207ENST00000492146 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
SFMBT1-207ENST00000492146 SCN11AQ9UI33 1791 aa12.31□□□□□ -0.44
SFMBT1-207ENST00000492146 BTBD11A6QL63 1104 aa12.31□□□□□ -0.44
SFMBT1-207ENST00000492146 CT47B1P0C2W7 299 aaPredicted RBP12.31□□□□□ -0.44
SFMBT1-207ENST00000492146 NFATC2IPQ8NCF5 419 aa12.31□□□□□ -0.44
SFMBT1-207ENST00000492146 ZNF428Q96B54 188 aa12.31□□□□□ -0.44
SFMBT1-207ENST00000492146 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
SFMBT1-207ENST00000492146 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
SFMBT1-207ENST00000492146 MRC1P22897 1456 aa12.3□□□□□ -0.44
SFMBT1-207ENST00000492146 HOXB7P09629 217 aa12.3□□□□□ -0.44
SFMBT1-207ENST00000492146 MCM10Q7L590 875 aa12.3□□□□□ -0.44
SFMBT1-207ENST00000492146 REM2Q8IYK8 340 aaPredicted RBP12.3□□□□□ -0.44
SFMBT1-207ENST00000492146 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
SFMBT1-207ENST00000492146 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
SFMBT1-207ENST00000492146 RRP7AQ9Y3A4 280 aaKnown RBP12.3□□□□□ -0.44
SFMBT1-207ENST00000492146 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
SFMBT1-207ENST00000492146 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
SFMBT1-207ENST00000492146 CHL1O00533 1208 aa12.29□□□□□ -0.44
SFMBT1-207ENST00000492146 PLSCR1O15162 318 aa12.29□□□□□ -0.44
SFMBT1-207ENST00000492146 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
SFMBT1-207ENST00000492146 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
SFMBT1-207ENST00000492146 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
SFMBT1-207ENST00000492146 TSPYL4Q9UJ04 414 aa12.29□□□□□ -0.44
SFMBT1-207ENST00000492146 ZNF521Q96K83 1311 aa12.29□□□□□ -0.44
SFMBT1-207ENST00000492146 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
SFMBT1-207ENST00000492146 SPOCK2Q92563 424 aa12.28□□□□□ -0.44
SFMBT1-207ENST00000492146 FMNL2Q96PY5 1086 aa12.28□□□□□ -0.44
SFMBT1-207ENST00000492146 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
SFMBT1-207ENST00000492146 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.44
SFMBT1-207ENST00000492146 ZNF853P0CG23 659 aa12.27□□□□□ -0.45
SFMBT1-207ENST00000492146 BAG6P46379 1132 aa12.27□□□□□ -0.45
SFMBT1-207ENST00000492146 SLC27A3Q5K4L6 730 aa12.27□□□□□ -0.45
SFMBT1-207ENST00000492146 PIGBQ92521 554 aa12.27□□□□□ -0.45
SFMBT1-207ENST00000492146 NHSQ6T4R5 1651 aa12.26□□□□□ -0.45
SFMBT1-207ENST00000492146 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
SFMBT1-207ENST00000492146 STARD3NLO95772 234 aa12.25□□□□□ -0.45
SFMBT1-207ENST00000492146 SNRPA1P09661 255 aaKnown RBP12.25□□□□□ -0.45
SFMBT1-207ENST00000492146 SLFN5Q08AF3 891 aa12.25□□□□□ -0.45
SFMBT1-207ENST00000492146 DCTN1Q14203 1278 aa12.25□□□□□ -0.45
SFMBT1-207ENST00000492146 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
SFMBT1-207ENST00000492146 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
SFMBT1-207ENST00000492146 VIRMAQ69YN4 1812 aaKnown RBP12.25□□□□□ -0.45
SFMBT1-207ENST00000492146 TRIM37O94972 964 aa12.24□□□□□ -0.45
SFMBT1-207ENST00000492146 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
SFMBT1-207ENST00000492146 ITGB4P16144 1822 aa12.23□□□□□ -0.45
SFMBT1-207ENST00000492146 SBF2Q86WG5 1849 aa12.23□□□□□ -0.45
SFMBT1-207ENST00000492146 DOT1LQ8TEK3 1739 aa12.23□□□□□ -0.45
SFMBT1-207ENST00000492146 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
SFMBT1-207ENST00000492146 APBA3O96018 575 aa12.23□□□□□ -0.45
SFMBT1-207ENST00000492146 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
SFMBT1-207ENST00000492146 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
SFMBT1-207ENST00000492146 SIPA1L3O60292 1781 aaPredicted RBP12.23□□□□□ -0.45
SFMBT1-207ENST00000492146 PALLDQ8WX93 1383 aa12.22□□□□□ -0.45
SFMBT1-207ENST00000492146 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
SFMBT1-207ENST00000492146 MBIPQ9NS73 344 aa12.22□□□□□ -0.45
SFMBT1-207ENST00000492146 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
SFMBT1-207ENST00000492146 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
SFMBT1-207ENST00000492146 RGPD3A6NKT7 1758 aaPredicted RBP12.21□□□□□ -0.45
SFMBT1-207ENST00000492146 RGPD4Q7Z3J3 1758 aa12.21□□□□□ -0.45
SFMBT1-207ENST00000492146 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.45
SFMBT1-207ENST00000492146 SIK1P57059 783 aa12.21□□□□□ -0.45
SFMBT1-207ENST00000492146 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms