RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 MSH6P52701 1360 aa13.08□□□□□ -0.32
SNED1-211ENST00000491761 SDSP20132 328 aa13.08□□□□□ -0.32
SNED1-211ENST00000491761 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
SNED1-211ENST00000491761 DIP2BQ9P265 1576 aa13.08□□□□□ -0.32
SNED1-211ENST00000491761 UBE2Q2Q8WVN8 375 aa13.08□□□□□ -0.32
SNED1-211ENST00000491761 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 LRRCC1Q9C099 1032 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 USP6P35125 1406 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 GSPT1P15170 499 aaKnown RBP13.07□□□□□ -0.32
SNED1-211ENST00000491761 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 TECPR2O15040 1411 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 PLEKHG1Q9ULL1 1385 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
SNED1-211ENST00000491761 EYA1Q99502 592 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 GRPEL1Q9HAV7 217 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 XRCC6P12956 609 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNED1-211ENST00000491761 EXOC6BQ9Y2D4 811 aa13.07□□□□□ -0.32
SNED1-211ENST00000491761 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
SNED1-211ENST00000491761 UBTFL1P0CB47 393 aaPredicted RBP13.06□□□□□ -0.32
SNED1-211ENST00000491761 SSFA2P28290 1259 aa13.06□□□□□ -0.32
SNED1-211ENST00000491761 FLIIQ13045 1269 aa13.06□□□□□ -0.32
SNED1-211ENST00000491761 OTUD7AQ8TE49 926 aaPredicted RBP13.06□□□□□ -0.32
SNED1-211ENST00000491761 CWC22Q9HCG8 908 aaKnown RBP13.06□□□□□ -0.32
SNED1-211ENST00000491761 NRDCO43847 1150 aa13.06□□□□□ -0.32
SNED1-211ENST00000491761 EIF2S2P20042 333 aaKnown RBP13.05□□□□□ -0.32
SNED1-211ENST00000491761 G2E3Q7L622 706 aa13.05□□□□□ -0.32
SNED1-211ENST00000491761 RTL1A6NKG5 1358 aa13.05□□□□□ -0.32
SNED1-211ENST00000491761 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
SNED1-211ENST00000491761 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
SNED1-211ENST00000491761 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
SNED1-211ENST00000491761 TAF7Q15545 349 aaPredicted RBP13.05□□□□□ -0.32
SNED1-211ENST00000491761 ANO2Q9NQ90 1003 aa13.05□□□□□ -0.32
SNED1-211ENST00000491761 R3HCC1Q9Y3T6 440 aaKnown RBP13.05□□□□□ -0.32
SNED1-211ENST00000491761 GOLGA6L6A8MZA4 724 aa13.03□□□□□ -0.32
SNED1-211ENST00000491761 NEK4P51957 841 aa13.03□□□□□ -0.32
SNED1-211ENST00000491761 TEFQ10587 303 aa13.03□□□□□ -0.32
SNED1-211ENST00000491761 PDE1AP54750 535 aa13.03□□□□□ -0.32
SNED1-211ENST00000491761 SYAP1Q96A49 352 aaPredicted RBP13.03□□□□□ -0.32
SNED1-211ENST00000491761 MX1P20591 662 aa13.03□□□□□ -0.32
SNED1-211ENST00000491761 ZNF592Q92610 1267 aa13.03□□□□□ -0.32
SNED1-211ENST00000491761 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
SNED1-211ENST00000491761 MCM2P49736 904 aa13.02□□□□□ -0.32
SNED1-211ENST00000491761 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
SNED1-211ENST00000491761 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
SNED1-211ENST00000491761 KIF2CQ99661 725 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
SNED1-211ENST00000491761 FSD2A1L4K1 749 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 PANK2Q9BZ23 570 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 HDAC5Q9UQL6 1122 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 LRRFIP2Q9Y608 721 aaKnown RBP13.01□□□□□ -0.33
SNED1-211ENST00000491761 USP31Q70CQ4 1352 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 ADAMTS13Q76LX8 1427 aa13.01□□□□□ -0.33
SNED1-211ENST00000491761 HOXC9P31274 260 aa13□□□□□ -0.33
SNED1-211ENST00000491761 TNNT3P45378 269 aaPredicted RBP13□□□□□ -0.33
SNED1-211ENST00000491761 ATP8B2P98198 1209 aa13□□□□□ -0.33
SNED1-211ENST00000491761 ESCO1Q5FWF5 840 aa13□□□□□ -0.33
SNED1-211ENST00000491761 HSP90B1P14625 803 aaKnown RBP13□□□□□ -0.33
SNED1-211ENST00000491761 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
SNED1-211ENST00000491761 ANKLE2Q86XL3 938 aa13□□□□□ -0.33
SNED1-211ENST00000491761 SOS1Q07889 1333 aaPredicted RBP12.99□□□□□ -0.33
SNED1-211ENST00000491761 USHBP1Q8N6Y0 703 aa12.99□□□□□ -0.33
SNED1-211ENST00000491761 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
SNED1-211ENST00000491761 C1orf141Q5JVX7 400 aa12.99□□□□□ -0.33
SNED1-211ENST00000491761 GTF2E1P29083 439 aaPredicted RBP12.99□□□□□ -0.33
SNED1-211ENST00000491761 CREBRFQ8IUR6 639 aa12.99□□□□□ -0.33
SNED1-211ENST00000491761 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
SNED1-211ENST00000491761 MAP3K5Q99683 1374 aa12.99□□□□□ -0.33
SNED1-211ENST00000491761 ITSN1Q15811 1721 aa12.99□□□□□ -0.33
SNED1-211ENST00000491761 XPCQ01831 940 aaPredicted RBP12.98□□□□□ -0.33
SNED1-211ENST00000491761 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
SNED1-211ENST00000491761 IL1RAPL2Q9NP60 686 aa12.98□□□□□ -0.33
SNED1-211ENST00000491761 NASPP49321 788 aaPredicted RBP12.98□□□□□ -0.33
SNED1-211ENST00000491761 HSPA2P54652 639 aa12.98□□□□□ -0.33
SNED1-211ENST00000491761 CRB1P82279 1406 aa12.98□□□□□ -0.33
SNED1-211ENST00000491761 GNL2Q13823 731 aaKnown RBP12.98□□□□□ -0.33
SNED1-211ENST00000491761 CAVIN1Q6NZI2 390 aaKnown RBP12.98□□□□□ -0.33
SNED1-211ENST00000491761 FBXW7Q969H0 707 aa12.98□□□□□ -0.33
SNED1-211ENST00000491761 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
SNED1-211ENST00000491761 NCOA3Q9Y6Q9 1424 aa12.98□□□□□ -0.33
SNED1-211ENST00000491761 PRPF40AO75400 957 aaKnown RBP12.98□□□□□ -0.33
SNED1-211ENST00000491761 KLHL40Q2TBA0 621 aa12.98□□□□□ -0.33
SNED1-211ENST00000491761 PLEKHO1Q53GL0 409 aaPredicted RBP12.98□□□□□ -0.33
SNED1-211ENST00000491761 RAB11FIP3O75154 756 aa12.97□□□□□ -0.33
SNED1-211ENST00000491761 KCNA6P17658 529 aa12.97□□□□□ -0.33
SNED1-211ENST00000491761 GPATCH3Q96I76 525 aa12.97□□□□□ -0.33
SNED1-211ENST00000491761 DDIT3P35638 169 aa12.97□□□□□ -0.33
SNED1-211ENST00000491761 ESYT1Q9BSJ8 1104 aa12.97□□□□□ -0.33
SNED1-211ENST00000491761 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
SNED1-211ENST00000491761 C9orf78Q9NZ63 289 aaPredicted RBP12.97□□□□□ -0.33
SNED1-211ENST00000491761 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
SNED1-211ENST00000491761 SRGAP3O43295 1099 aa12.96□□□□□ -0.33
SNED1-211ENST00000491761 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms