RNA–Protein interactions for RNA: ENST00000491438.2

CNTNAP3B-210, Transcript of contactin associated protein like 3B, humanhuman

TSL 2

Gene CNTNAP3B, Length 438 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-210ENST00000491438 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
CNTNAP3B-210ENST00000491438 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
CNTNAP3B-210ENST00000491438 RREB1Q92766 1687 aa12.57□□□□□ -0.4
CNTNAP3B-210ENST00000491438 DEFB132Q7Z7B7 95 aa12.57□□□□□ -0.4
CNTNAP3B-210ENST00000491438 CCDC146Q8IYE0 955 aa12.57□□□□□ -0.4
CNTNAP3B-210ENST00000491438 PIGBQ92521 554 aa12.57□□□□□ -0.4
CNTNAP3B-210ENST00000491438 CAMKK2Q96RR4 588 aa12.57□□□□□ -0.4
CNTNAP3B-210ENST00000491438 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
CNTNAP3B-210ENST00000491438 LY75O60449 1722 aa12.57□□□□□ -0.4
CNTNAP3B-210ENST00000491438 TMPOP42166 694 aaKnown RBP12.56□□□□□ -0.4
CNTNAP3B-210ENST00000491438 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
CNTNAP3B-210ENST00000491438 TEFQ10587 303 aa12.56□□□□□ -0.4
CNTNAP3B-210ENST00000491438 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
CNTNAP3B-210ENST00000491438 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
CNTNAP3B-210ENST00000491438 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
CNTNAP3B-210ENST00000491438 RIPK4P57078 832 aa12.55□□□□□ -0.4
CNTNAP3B-210ENST00000491438 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
CNTNAP3B-210ENST00000491438 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
CNTNAP3B-210ENST00000491438 SIPA1L3O60292 1781 aaPredicted RBP12.55□□□□□ -0.4
CNTNAP3B-210ENST00000491438 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
CNTNAP3B-210ENST00000491438 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
CNTNAP3B-210ENST00000491438 NFATC2IPQ8NCF5 419 aa12.54□□□□□ -0.4
CNTNAP3B-210ENST00000491438 PAPPAQ13219 1627 aa12.54□□□□□ -0.4
CNTNAP3B-210ENST00000491438 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
CNTNAP3B-210ENST00000491438 MCM10Q7L590 875 aa12.53□□□□□ -0.4
CNTNAP3B-210ENST00000491438 ZNF831Q5JPB2 1677 aa12.53□□□□□ -0.4
CNTNAP3B-210ENST00000491438 APAF1O14727 1248 aa12.52□□□□□ -0.41
CNTNAP3B-210ENST00000491438 FAM9BQ8IZU0 186 aa12.52□□□□□ -0.41
CNTNAP3B-210ENST00000491438 MIER1Q8N108 512 aa12.52□□□□□ -0.41
CNTNAP3B-210ENST00000491438 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
CNTNAP3B-210ENST00000491438 ATG3Q9NT62 314 aa12.52□□□□□ -0.41
CNTNAP3B-210ENST00000491438 ASAP1Q9ULH1 1129 aa12.52□□□□□ -0.41
CNTNAP3B-210ENST00000491438 TTC5Q8N0Z6 440 aa12.51□□□□□ -0.41
CNTNAP3B-210ENST00000491438 CCNL1Q9UK58 526 aaPredicted RBP12.51□□□□□ -0.41
CNTNAP3B-210ENST00000491438 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
CNTNAP3B-210ENST00000491438 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
CNTNAP3B-210ENST00000491438 UBR2Q8IWV8 1755 aa12.51□□□□□ -0.41
CNTNAP3B-210ENST00000491438 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
CNTNAP3B-210ENST00000491438 SIK1P57059 783 aa12.5□□□□□ -0.41
CNTNAP3B-210ENST00000491438 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
CNTNAP3B-210ENST00000491438 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
CNTNAP3B-210ENST00000491438 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
CNTNAP3B-210ENST00000491438 NBPF14Q5TI25 921 aa12.5□□□□□ -0.41
CNTNAP3B-210ENST00000491438 PROM2Q8N271 834 aa12.5□□□□□ -0.41
CNTNAP3B-210ENST00000491438 BABAM1Q9NWV8 329 aa12.5□□□□□ -0.41
CNTNAP3B-210ENST00000491438 TAF1LQ8IZX4 1826 aa12.49□□□□□ -0.41
CNTNAP3B-210ENST00000491438 C5P01031 1676 aa12.49□□□□□ -0.41
CNTNAP3B-210ENST00000491438 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
CNTNAP3B-210ENST00000491438 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
CNTNAP3B-210ENST00000491438 TAF7Q15545 349 aaPredicted RBP12.49□□□□□ -0.41
CNTNAP3B-210ENST00000491438 CCDC27Q2M243 656 aa12.49□□□□□ -0.41
CNTNAP3B-210ENST00000491438 ZNF790Q6PG37 636 aa12.49□□□□□ -0.41
CNTNAP3B-210ENST00000491438 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
CNTNAP3B-210ENST00000491438 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
CNTNAP3B-210ENST00000491438 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
CNTNAP3B-210ENST00000491438 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
CNTNAP3B-210ENST00000491438 SLC39A6Q13433 755 aa12.47□□□□□ -0.41
CNTNAP3B-210ENST00000491438 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
CNTNAP3B-210ENST00000491438 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
CNTNAP3B-210ENST00000491438 LRRC4BQ9NT99 713 aa12.47□□□□□ -0.41
CNTNAP3B-210ENST00000491438 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
CNTNAP3B-210ENST00000491438 FMNL2Q96PY5 1086 aa12.46□□□□□ -0.41
CNTNAP3B-210ENST00000491438 STK32BQ9NY57 414 aa12.46□□□□□ -0.41
CNTNAP3B-210ENST00000491438 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
CNTNAP3B-210ENST00000491438 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
CNTNAP3B-210ENST00000491438 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
CNTNAP3B-210ENST00000491438 TJP1Q07157 1748 aa12.45□□□□□ -0.42
CNTNAP3B-210ENST00000491438 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
CNTNAP3B-210ENST00000491438 CNTNAP4Q9C0A0 1308 aa12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 ITPK1Q13572 414 aa12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 SLC15A2Q16348 729 aa12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 WWC1Q8IX03 1113 aa12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 CFAP44Q96MT7 982 aa12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 SLC4A9Q96Q91 983 aa12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 TEX13AQ9BXU3 409 aaPredicted RBP12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 IFT57Q9NWB7 429 aa12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 TSPYL4Q9UJ04 414 aa12.44□□□□□ -0.42
CNTNAP3B-210ENST00000491438 IL16Q14005 1332 aa12.43□□□□□ -0.42
CNTNAP3B-210ENST00000491438 CHL1O00533 1208 aa12.43□□□□□ -0.42
CNTNAP3B-210ENST00000491438 KCNQ4P56696 695 aa12.43□□□□□ -0.42
CNTNAP3B-210ENST00000491438 GNAI1P63096 354 aa12.43□□□□□ -0.42
CNTNAP3B-210ENST00000491438 RC3H1Q5TC82 1133 aaKnown RBP12.43□□□□□ -0.42
CNTNAP3B-210ENST00000491438 LINC00116Q8NCU8 138 aa12.43□□□□□ -0.42
CNTNAP3B-210ENST00000491438 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
CNTNAP3B-210ENST00000491438 STARD3NLO95772 234 aa12.42□□□□□ -0.42
CNTNAP3B-210ENST00000491438 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
CNTNAP3B-210ENST00000491438 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
CNTNAP3B-210ENST00000491438 ZNF827Q17R98 1081 aa12.42□□□□□ -0.42
CNTNAP3B-210ENST00000491438 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
CNTNAP3B-210ENST00000491438 AK7Q96M32 723 aa12.42□□□□□ -0.42
CNTNAP3B-210ENST00000491438 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
CNTNAP3B-210ENST00000491438 KCNQ3O43525 872 aa12.41□□□□□ -0.42
CNTNAP3B-210ENST00000491438 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
CNTNAP3B-210ENST00000491438 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
CNTNAP3B-210ENST00000491438 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
CNTNAP3B-210ENST00000491438 UBR3Q6ZT12 1888 aa12.41□□□□□ -0.42
CNTNAP3B-210ENST00000491438 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
CNTNAP3B-210ENST00000491438 FLAD1Q8NFF5 587 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms