RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
VPS72-205ENST00000491094 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
VPS72-205ENST00000491094 RBM33Q96EV2 1170 aaKnown RBP13.53□□□□□ -0.24
VPS72-205ENST00000491094 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.24
VPS72-205ENST00000491094 CHMLP26374 656 aa13.52□□□□□ -0.24
VPS72-205ENST00000491094 PHAXQ9H814 394 aaKnown RBP13.52□□□□□ -0.24
VPS72-205ENST00000491094 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.25
VPS72-205ENST00000491094 UQCRHLA0A096LP55 91 aa13.52□□□□□ -0.25
VPS72-205ENST00000491094 UQCRHP07919 91 aa13.52□□□□□ -0.25
VPS72-205ENST00000491094 OFD1O75665 1012 aa13.51□□□□□ -0.25
VPS72-205ENST00000491094 TPM2P07951 284 aa13.51□□□□□ -0.25
VPS72-205ENST00000491094 EYA1Q99502 592 aa13.51□□□□□ -0.25
VPS72-205ENST00000491094 IL25Q9H293 177 aa13.51□□□□□ -0.25
VPS72-205ENST00000491094 EDC4Q6P2E9 1401 aaKnown RBP13.51□□□□□ -0.25
VPS72-205ENST00000491094 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
VPS72-205ENST00000491094 TSPY26PQ9H489 355 aa13.51□□□□□ -0.25
VPS72-205ENST00000491094 GNAI3P08754 354 aa13.51□□□□□ -0.25
VPS72-205ENST00000491094 CEBPAP49715 358 aaPredicted RBP13.51□□□□□ -0.25
VPS72-205ENST00000491094 USP48Q86UV5 1035 aa13.51□□□□□ -0.25
VPS72-205ENST00000491094 C17orf53Q8N3J3 647 aaPredicted RBP13.51□□□□□ -0.25
VPS72-205ENST00000491094 BCL11BQ9C0K0 894 aaPredicted RBP13.51□□□□□ -0.25
VPS72-205ENST00000491094 USP25Q9UHP3 1055 aa13.51□□□□□ -0.25
VPS72-205ENST00000491094 KCNJ4P48050 445 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 TSC1Q92574 1164 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 SIGLEC1Q9BZZ2 1709 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 HDGFL1Q5TGJ6 251 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 CCDC30Q5VVM6 783 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
VPS72-205ENST00000491094 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
VPS72-205ENST00000491094 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
VPS72-205ENST00000491094 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
VPS72-205ENST00000491094 CNPY2Q9Y2B0 182 aa13.49□□□□□ -0.25
VPS72-205ENST00000491094 MBD3O95983 291 aa13.49□□□□□ -0.25
VPS72-205ENST00000491094 HDGFP51858 240 aaKnown RBP13.49□□□□□ -0.25
VPS72-205ENST00000491094 CLEC17AQ6ZS10 378 aa13.49□□□□□ -0.25
VPS72-205ENST00000491094 CFAP74Q9C0B2 1584 aa13.49□□□□□ -0.25
VPS72-205ENST00000491094 USP32Q8NFA0 1604 aa13.49□□□□□ -0.25
VPS72-205ENST00000491094 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
VPS72-205ENST00000491094 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
VPS72-205ENST00000491094 NOL7Q9UMY1 257 aaKnown RBP13.48□□□□□ -0.25
VPS72-205ENST00000491094 CPS1P31327 1500 aa13.48□□□□□ -0.25
VPS72-205ENST00000491094 ATP8B2P98198 1209 aa13.48□□□□□ -0.25
VPS72-205ENST00000491094 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
VPS72-205ENST00000491094 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
VPS72-205ENST00000491094 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
VPS72-205ENST00000491094 ZKSCAN5Q9Y2L8 839 aa13.47□□□□□ -0.25
VPS72-205ENST00000491094 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
VPS72-205ENST00000491094 BRD1O95696 1058 aa13.47□□□□□ -0.25
VPS72-205ENST00000491094 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
VPS72-205ENST00000491094 FERMT3Q86UX7 667 aa13.47□□□□□ -0.25
VPS72-205ENST00000491094 PKNOX2Q96KN3 472 aa13.47□□□□□ -0.25
VPS72-205ENST00000491094 TCEANC2Q96MN5 208 aa13.47□□□□□ -0.25
VPS72-205ENST00000491094 CCDC39Q9UFE4 941 aa13.47□□□□□ -0.25
VPS72-205ENST00000491094 SMC3Q9UQE7 1217 aa13.47□□□□□ -0.25
VPS72-205ENST00000491094 CCDC9Q9Y3X0 531 aaKnown RBP13.47□□□□□ -0.25
VPS72-205ENST00000491094 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
VPS72-205ENST00000491094 SPC24Q8NBT2 197 aa13.46□□□□□ -0.25
VPS72-205ENST00000491094 USP44Q9H0E7 712 aa13.46□□□□□ -0.25
VPS72-205ENST00000491094 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.26
VPS72-205ENST00000491094 GIMAP6Q6P9H5 292 aa13.46□□□□□ -0.26
VPS72-205ENST00000491094 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.26
VPS72-205ENST00000491094 NBPF7P0C2Y1 421 aaPredicted RBP13.45□□□□□ -0.26
VPS72-205ENST00000491094 MCM2P49736 904 aa13.45□□□□□ -0.26
VPS72-205ENST00000491094 CASTP20810 708 aaKnown RBP13.45□□□□□ -0.26
VPS72-205ENST00000491094 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
VPS72-205ENST00000491094 SRCIN1Q9C0H9 1055 aa13.45□□□□□ -0.26
VPS72-205ENST00000491094 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
VPS72-205ENST00000491094 DIAPH3Q9NSV4 1193 aa13.45□□□□□ -0.26
VPS72-205ENST00000491094 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
VPS72-205ENST00000491094 KIAA2012Q0VF49 1180 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 PI4KAP2A4QPH2 592 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
VPS72-205ENST00000491094 FAM173BQ6P4H8 233 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 PI4KAP1Q8N8J0 262 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS72-205ENST00000491094 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 AK2P54819 239 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 RHPN1Q8TCX5 695 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 PDCL3Q9H2J4 239 aa13.44□□□□□ -0.26
VPS72-205ENST00000491094 PA2G4Q9UQ80 394 aaKnown RBP13.44□□□□□ -0.26
VPS72-205ENST00000491094 CPSF1Q10570 1443 aaKnown RBP13.44□□□□□ -0.26
VPS72-205ENST00000491094 WDR33Q9C0J8 1336 aaKnown RBP13.44□□□□□ -0.26
VPS72-205ENST00000491094 RGS12O14924 1447 aa13.43□□□□□ -0.26
VPS72-205ENST00000491094 PRPF40BQ6NWY9 871 aaKnown RBP13.43□□□□□ -0.26
VPS72-205ENST00000491094 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
VPS72-205ENST00000491094 MYO5BQ9ULV0 1848 aa13.43□□□□□ -0.26
VPS72-205ENST00000491094 JAKMIP1Q96N16 626 aaKnown RBP13.43□□□□□ -0.26
VPS72-205ENST00000491094 ROBO2Q9HCK4 1378 aa13.43□□□□□ -0.26
VPS72-205ENST00000491094 KCNQ3O43525 872 aa13.43□□□□□ -0.26
VPS72-205ENST00000491094 CAMK4Q16566 473 aa13.43□□□□□ -0.26
VPS72-205ENST00000491094 OSBPL3Q9H4L5 887 aa13.43□□□□□ -0.26
VPS72-205ENST00000491094 C9orf78Q9NZ63 289 aaPredicted RBP13.43□□□□□ -0.26
VPS72-205ENST00000491094 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms