RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TCEAL9Q9UHQ7 104 aa17.33■□□□□ 0.37
ARHGEF39-205ENST00000490638 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 METP08581 1390 aa17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 NPHP4O75161 1426 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 PTMSP20962 102 aa17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 FAM98CQ17RN3 349 aaKnown RBP17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 XAGE3Q8WTP9 111 aa17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 CWC25Q9NXE8 425 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 LRRFIP2Q9Y608 721 aaKnown RBP17.33■□□□□ 0.36
ARHGEF39-205ENST00000490638 IL16Q14005 1332 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 CDCA7Q9BWT1 371 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 CHD1LQ86WJ1 897 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 USP21Q9UK80 565 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
ARHGEF39-205ENST00000490638 ANKRD18BA2A2Z9 1011 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 TRIM27P14373 513 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 PSMA5P28066 241 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 LDHAL6AQ6ZMR3 332 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 CHPF2Q9P2E5 772 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 EFCAB6Q5THR3 1501 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 POLR3AO14802 1390 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 ZSCAN25Q6NSZ9 544 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 TFCP2L1Q9NZI6 479 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 ZNF335Q9H4Z2 1342 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 STK11IPQ8N1F8 1099 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 PTPRCP08575 1304 aa17.31■□□□□ 0.36
ARHGEF39-205ENST00000490638 PLEKHG1Q9ULL1 1385 aa17.3■□□□□ 0.36
ARHGEF39-205ENST00000490638 COL17A1Q9UMD9 1497 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF39-205ENST00000490638 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
ARHGEF39-205ENST00000490638 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
ARHGEF39-205ENST00000490638 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 SAFBQ15424 915 aaKnown RBP eCLIP17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 CDC5LQ99459 802 aaKnown RBP17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 PIK3R4Q99570 1358 aa17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
ARHGEF39-205ENST00000490638 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
ARHGEF39-205ENST00000490638 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
ARHGEF39-205ENST00000490638 C8orf58Q8NAV2 365 aa17.28■□□□□ 0.36
ARHGEF39-205ENST00000490638 TMOD2Q9NZR1 351 aa17.28■□□□□ 0.36
ARHGEF39-205ENST00000490638 RTCBQ9Y3I0 505 aaKnown RBP17.28■□□□□ 0.36
ARHGEF39-205ENST00000490638 NEK4P51957 841 aa17.28■□□□□ 0.36
ARHGEF39-205ENST00000490638 FOSBP53539 338 aa17.28■□□□□ 0.36
ARHGEF39-205ENST00000490638 HECW2Q9P2P5 1572 aa17.27■□□□□ 0.36
ARHGEF39-205ENST00000490638 NBPF14Q5TI25 921 aa17.27■□□□□ 0.36
ARHGEF39-205ENST00000490638 SBNO1A3KN83 1393 aa17.27■□□□□ 0.35
ARHGEF39-205ENST00000490638 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.35
ARHGEF39-205ENST00000490638 KDM6BO15054 1643 aa17.27■□□□□ 0.35
ARHGEF39-205ENST00000490638 CCAR1Q8IX12 1150 aaKnown RBP17.27■□□□□ 0.35
ARHGEF39-205ENST00000490638 NIP7Q9Y221 180 aaKnown RBP eCLIP17.26■□□□□ 0.35
ARHGEF39-205ENST00000490638 CCDC8Q9H0W5 538 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF39-205ENST00000490638 BOLA2Q9H3K6 86 aa17.26■□□□□ 0.35
ARHGEF39-205ENST00000490638 ZFYVE9O95405 1425 aa17.26■□□□□ 0.35
ARHGEF39-205ENST00000490638 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
ARHGEF39-205ENST00000490638 TDO2P48775 406 aa17.25■□□□□ 0.35
ARHGEF39-205ENST00000490638 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
ARHGEF39-205ENST00000490638 NLRP1Q9C000 1473 aa17.25■□□□□ 0.35
ARHGEF39-205ENST00000490638 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
ARHGEF39-205ENST00000490638 MAP3K5Q99683 1374 aa17.25■□□□□ 0.35
ARHGEF39-205ENST00000490638 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
ARHGEF39-205ENST00000490638 PIK3C2GO75747 1445 aa17.25■□□□□ 0.35
ARHGEF39-205ENST00000490638 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 PREX2Q70Z35 1606 aa17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 CWC27Q6UX04 472 aaKnown RBP17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 SMARCA5O60264 1052 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 KDM4AO75164 1064 aa17.24■□□□□ 0.35
ARHGEF39-205ENST00000490638 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
ARHGEF39-205ENST00000490638 SLC5A1P13866 664 aa17.23■□□□□ 0.35
ARHGEF39-205ENST00000490638 IL13P35225 146 aa17.23■□□□□ 0.35
ARHGEF39-205ENST00000490638 ST5P78524 1137 aa17.23■□□□□ 0.35
ARHGEF39-205ENST00000490638 AIDAQ96BJ3 306 aa17.23■□□□□ 0.35
ARHGEF39-205ENST00000490638 TPM4P67936 248 aa17.23■□□□□ 0.35
ARHGEF39-205ENST00000490638 XBP1P17861 261 aa17.22■□□□□ 0.35
ARHGEF39-205ENST00000490638 KSR2Q6VAB6 950 aa17.22■□□□□ 0.35
ARHGEF39-205ENST00000490638 MX1P20591 662 aa17.21■□□□□ 0.35
ARHGEF39-205ENST00000490638 DDX49Q9Y6V7 483 aaKnown RBP17.21■□□□□ 0.35
ARHGEF39-205ENST00000490638 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
ARHGEF39-205ENST00000490638 CCNL1Q9UK58 526 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF39-205ENST00000490638 PTPRTO14522 1441 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms