RNA–Protein interactions for RNA: ENST00000490389.1

FARP1-207, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-207ENST00000490389 LMOD3Q0VAK6 560 aa16.32■□□□□ 0.2
FARP1-207ENST00000490389 CAMKK2Q96RR4 588 aa16.32■□□□□ 0.2
FARP1-207ENST00000490389 SALL2Q9Y467 1007 aaPredicted RBP16.32■□□□□ 0.2
FARP1-207ENST00000490389 TOGARAM1Q9Y4F4 1720 aa16.32■□□□□ 0.2
FARP1-207ENST00000490389 KAT6BQ8WYB5 2073 aa16.31■□□□□ 0.2
FARP1-207ENST00000490389 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
FARP1-207ENST00000490389 PLSCR1O15162 318 aa16.31■□□□□ 0.2
FARP1-207ENST00000490389 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
FARP1-207ENST00000490389 ATG3Q9NT62 314 aa16.31■□□□□ 0.2
FARP1-207ENST00000490389 KCNQ4P56696 695 aa16.3■□□□□ 0.2
FARP1-207ENST00000490389 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
FARP1-207ENST00000490389 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
FARP1-207ENST00000490389 TNS1Q9HBL0 1735 aaKnown RBP16.3■□□□□ 0.2
FARP1-207ENST00000490389 CEMIPQ8WUJ3 1361 aa16.29■□□□□ 0.2
FARP1-207ENST00000490389 SBF2Q86WG5 1849 aa16.29■□□□□ 0.2
FARP1-207ENST00000490389 BTBD11A6QL63 1104 aa16.29■□□□□ 0.2
FARP1-207ENST00000490389 PTCD1O75127 700 aaKnown RBP16.29■□□□□ 0.2
FARP1-207ENST00000490389 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
FARP1-207ENST00000490389 TRIM35Q9UPQ4 493 aa16.29■□□□□ 0.2
FARP1-207ENST00000490389 MIS18AQ9NYP9 233 aa16.28■□□□□ 0.2
FARP1-207ENST00000490389 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
FARP1-207ENST00000490389 BTAF1O14981 1849 aa16.27■□□□□ 0.2
FARP1-207ENST00000490389 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
FARP1-207ENST00000490389 PROM2Q8N271 834 aa16.27■□□□□ 0.2
FARP1-207ENST00000490389 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
FARP1-207ENST00000490389 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
FARP1-207ENST00000490389 SIK1P57059 783 aa16.26■□□□□ 0.19
FARP1-207ENST00000490389 TAF7Q15545 349 aaPredicted RBP16.26■□□□□ 0.19
FARP1-207ENST00000490389 MRC1P22897 1456 aa16.26■□□□□ 0.19
FARP1-207ENST00000490389 LRRC4BQ9NT99 713 aa16.25■□□□□ 0.19
FARP1-207ENST00000490389 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
FARP1-207ENST00000490389 KCNQ3O43525 872 aa16.24■□□□□ 0.19
FARP1-207ENST00000490389 ATP6V1AP38606 617 aa16.24■□□□□ 0.19
FARP1-207ENST00000490389 SLC27A3Q5K4L6 730 aa16.24■□□□□ 0.19
FARP1-207ENST00000490389 ZNF790Q6PG37 636 aa16.24■□□□□ 0.19
FARP1-207ENST00000490389 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
FARP1-207ENST00000490389 ITGB4P16144 1822 aa16.23■□□□□ 0.19
FARP1-207ENST00000490389 ADAMTS7Q9UKP4 1686 aa16.23■□□□□ 0.19
FARP1-207ENST00000490389 WWC1Q8IX03 1113 aa16.22■□□□□ 0.19
FARP1-207ENST00000490389 SLC4A9Q96Q91 983 aa16.22■□□□□ 0.19
FARP1-207ENST00000490389 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
FARP1-207ENST00000490389 ITPK1Q13572 414 aa16.21■□□□□ 0.19
FARP1-207ENST00000490389 NBPF14Q5TI25 921 aa16.21■□□□□ 0.19
FARP1-207ENST00000490389 ZNF496Q96IT1 587 aaPredicted RBP16.21■□□□□ 0.19
FARP1-207ENST00000490389 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
FARP1-207ENST00000490389 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
FARP1-207ENST00000490389 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
FARP1-207ENST00000490389 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
FARP1-207ENST00000490389 DNAJC10Q8IXB1 793 aa16.19■□□□□ 0.18
FARP1-207ENST00000490389 LINC00116Q8NCU8 138 aa16.19■□□□□ 0.18
FARP1-207ENST00000490389 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
FARP1-207ENST00000490389 DLG5Q8TDM6 1919 aa16.19■□□□□ 0.18
FARP1-207ENST00000490389 PSDA5PKW4 1024 aaPredicted RBP16.18■□□□□ 0.18
FARP1-207ENST00000490389 ZNF827Q17R98 1081 aa16.18■□□□□ 0.18
FARP1-207ENST00000490389 HEG1Q9ULI3 1381 aa16.17■□□□□ 0.18
FARP1-207ENST00000490389 CHL1O00533 1208 aa16.17■□□□□ 0.18
FARP1-207ENST00000490389 GNAI1P63096 354 aa16.17■□□□□ 0.18
FARP1-207ENST00000490389 R3HDM1Q15032 1099 aaKnown RBP16.17■□□□□ 0.18
FARP1-207ENST00000490389 AK7Q96M32 723 aa16.17■□□□□ 0.18
FARP1-207ENST00000490389 CFAP44Q96MT7 982 aa16.17■□□□□ 0.18
FARP1-207ENST00000490389 IFT57Q9NWB7 429 aa16.17■□□□□ 0.18
FARP1-207ENST00000490389 KCPQ6ZWJ8 1503 aa16.17■□□□□ 0.18
FARP1-207ENST00000490389 EIF4A1P60842 406 aaKnown RBP16.16■□□□□ 0.18
FARP1-207ENST00000490389 HNRNPUQ00839 825 aaKnown RBP eCLIP16.16■□□□□ 0.18
FARP1-207ENST00000490389 SLC15A2Q16348 729 aa16.16■□□□□ 0.18
FARP1-207ENST00000490389 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
FARP1-207ENST00000490389 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
FARP1-207ENST00000490389 BABAM1Q9NWV8 329 aa16.16■□□□□ 0.18
FARP1-207ENST00000490389 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
FARP1-207ENST00000490389 RGPD3A6NKT7 1758 aaPredicted RBP16.15■□□□□ 0.18
FARP1-207ENST00000490389 RGPD4Q7Z3J3 1758 aa16.15■□□□□ 0.18
FARP1-207ENST00000490389 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
FARP1-207ENST00000490389 SNRPA1P09661 255 aaKnown RBP16.15■□□□□ 0.18
FARP1-207ENST00000490389 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
FARP1-207ENST00000490389 VSIG10Q8N0Z9 540 aa16.15■□□□□ 0.18
FARP1-207ENST00000490389 GNPATO15228 680 aa16.14■□□□□ 0.17
FARP1-207ENST00000490389 HMGB2P26583 209 aaKnown RBP16.14■□□□□ 0.17
FARP1-207ENST00000490389 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
FARP1-207ENST00000490389 AKT1S1Q96B36 256 aa16.14■□□□□ 0.17
FARP1-207ENST00000490389 PAPPAQ13219 1627 aa16.14■□□□□ 0.17
FARP1-207ENST00000490389 RREB1Q92766 1687 aa16.14■□□□□ 0.17
FARP1-207ENST00000490389 LY75O60449 1722 aa16.14■□□□□ 0.17
FARP1-207ENST00000490389 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
FARP1-207ENST00000490389 VIRMAQ69YN4 1812 aaKnown RBP16.13■□□□□ 0.17
FARP1-207ENST00000490389 PHF14O94880 888 aa16.13■□□□□ 0.17
FARP1-207ENST00000490389 STARD3NLO95772 234 aa16.13■□□□□ 0.17
FARP1-207ENST00000490389 ZNF853P0CG23 659 aa16.13■□□□□ 0.17
FARP1-207ENST00000490389 CRKLP46109 303 aaKnown RBP16.13■□□□□ 0.17
FARP1-207ENST00000490389 KRT24Q2M2I5 525 aa16.13■□□□□ 0.17
FARP1-207ENST00000490389 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
FARP1-207ENST00000490389 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
FARP1-207ENST00000490389 NUP188Q5SRE5 1749 aa16.13■□□□□ 0.17
FARP1-207ENST00000490389 IL16Q14005 1332 aa16.13■□□□□ 0.17
FARP1-207ENST00000490389 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
FARP1-207ENST00000490389 USP16Q9Y5T5 823 aa16.12■□□□□ 0.17
FARP1-207ENST00000490389 GIGYF1O75420 1035 aaPredicted RBP16.11■□□□□ 0.17
FARP1-207ENST00000490389 CANXP27824 592 aaKnown RBP16.11■□□□□ 0.17
FARP1-207ENST00000490389 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
FARP1-207ENST00000490389 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
FARP1-207ENST00000490389 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms