RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 KCPQ6ZWJ8 1503 aa14.28□□□□□ -0.12
TFF3-203ENST00000489676 WDR63Q8IWG1 891 aa14.28□□□□□ -0.12
TFF3-203ENST00000489676 CICQ96RK0 1608 aaPredicted RBP14.27□□□□□ -0.12
TFF3-203ENST00000489676 FAM196AQ6ZSG2 479 aa14.27□□□□□ -0.13
TFF3-203ENST00000489676 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
TFF3-203ENST00000489676 KCNQ2O43526 872 aa14.26□□□□□ -0.13
TFF3-203ENST00000489676 PRIM1P49642 420 aaKnown RBP14.26□□□□□ -0.13
TFF3-203ENST00000489676 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
TFF3-203ENST00000489676 TEFQ10587 303 aa14.26□□□□□ -0.13
TFF3-203ENST00000489676 YTHDC1Q96MU7 727 aaKnown RBP14.26□□□□□ -0.13
TFF3-203ENST00000489676 IFT57Q9NWB7 429 aa14.26□□□□□ -0.13
TFF3-203ENST00000489676 RGPD3A6NKT7 1758 aaPredicted RBP14.25□□□□□ -0.13
TFF3-203ENST00000489676 RGPD4Q7Z3J3 1758 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 LY75O60449 1722 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 CHL1O00533 1208 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 CABP4P57796 275 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 PTF1AQ7RTS3 328 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 NFATC2IPQ8NCF5 419 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 PIGBQ92521 554 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 CFAP44Q96MT7 982 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 SRCAPQ6ZRS2 3230 aa14.25□□□□□ -0.13
TFF3-203ENST00000489676 KAT6BQ8WYB5 2073 aa14.24□□□□□ -0.13
TFF3-203ENST00000489676 ZNF831Q5JPB2 1677 aa14.24□□□□□ -0.13
TFF3-203ENST00000489676 GOLGA2Q08379 1002 aa14.24□□□□□ -0.13
TFF3-203ENST00000489676 TAF7Q15545 349 aaPredicted RBP14.24□□□□□ -0.13
TFF3-203ENST00000489676 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
TFF3-203ENST00000489676 TMOD3Q9NYL9 352 aa14.24□□□□□ -0.13
TFF3-203ENST00000489676 FANCIQ9NVI1 1328 aa14.23□□□□□ -0.13
TFF3-203ENST00000489676 GNAI1P63096 354 aa14.23□□□□□ -0.13
TFF3-203ENST00000489676 SLFN5Q08AF3 891 aa14.23□□□□□ -0.13
TFF3-203ENST00000489676 TRMT2AQ8IZ69 625 aaKnown RBP14.23□□□□□ -0.13
TFF3-203ENST00000489676 CDCA7LQ96GN5 454 aa14.23□□□□□ -0.13
TFF3-203ENST00000489676 TJP1Q07157 1748 aa14.23□□□□□ -0.13
TFF3-203ENST00000489676 C5P01031 1676 aa14.23□□□□□ -0.13
TFF3-203ENST00000489676 HEG1Q9ULI3 1381 aa14.22□□□□□ -0.13
TFF3-203ENST00000489676 E9PSI1 815 aa14.22□□□□□ -0.13
TFF3-203ENST00000489676 SYTL4Q96C24 671 aaPredicted RBP14.22□□□□□ -0.13
TFF3-203ENST00000489676 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
TFF3-203ENST00000489676 MBIPQ9NS73 344 aa14.22□□□□□ -0.13
TFF3-203ENST00000489676 LAMB4A4D0S4 1761 aa14.22□□□□□ -0.13
TFF3-203ENST00000489676 BTBD11A6QL63 1104 aa14.21□□□□□ -0.13
TFF3-203ENST00000489676 KCNQ3O43525 872 aa14.21□□□□□ -0.13
TFF3-203ENST00000489676 DUSP27Q5VZP5 1158 aa14.21□□□□□ -0.13
TFF3-203ENST00000489676 ZNF790Q6PG37 636 aa14.21□□□□□ -0.13
TFF3-203ENST00000489676 TSR2Q969E8 191 aaKnown RBP14.21□□□□□ -0.13
TFF3-203ENST00000489676 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
TFF3-203ENST00000489676 MIS18AQ9NYP9 233 aa14.21□□□□□ -0.13
TFF3-203ENST00000489676 TRIM37O94972 964 aa14.2□□□□□ -0.14
TFF3-203ENST00000489676 SLC39A6Q13433 755 aa14.2□□□□□ -0.14
TFF3-203ENST00000489676 TSPYL4Q9UJ04 414 aa14.2□□□□□ -0.14
TFF3-203ENST00000489676 ASAP1Q9ULH1 1129 aa14.2□□□□□ -0.14
TFF3-203ENST00000489676 PALLDQ8WX93 1383 aa14.2□□□□□ -0.14
TFF3-203ENST00000489676 COL5A3P25940 1745 aaPredicted RBP14.19□□□□□ -0.14
TFF3-203ENST00000489676 EIF4A1P60842 406 aaKnown RBP14.19□□□□□ -0.14
TFF3-203ENST00000489676 MYH16Q9H6N6 1097 aa14.19□□□□□ -0.14
TFF3-203ENST00000489676 LAS1LQ9Y4W2 734 aaKnown RBP14.18□□□□□ -0.14
TFF3-203ENST00000489676 RREB1Q92766 1687 aa14.17□□□□□ -0.14
TFF3-203ENST00000489676 ZNF496Q96IT1 587 aaPredicted RBP14.17□□□□□ -0.14
TFF3-203ENST00000489676 SLC4A9Q96Q91 983 aa14.17□□□□□ -0.14
TFF3-203ENST00000489676 TAF1LQ8IZX4 1826 aa14.17□□□□□ -0.14
TFF3-203ENST00000489676 KRT24Q2M2I5 525 aa14.16□□□□□ -0.14
TFF3-203ENST00000489676 TTC5Q8N0Z6 440 aa14.16□□□□□ -0.14
TFF3-203ENST00000489676 SMARCC1Q92922 1105 aaPredicted RBP14.16□□□□□ -0.14
TFF3-203ENST00000489676 C8orf58Q8NAV2 365 aa14.15□□□□□ -0.14
TFF3-203ENST00000489676 FMNL2Q96PY5 1086 aa14.15□□□□□ -0.14
TFF3-203ENST00000489676 EXOSC9Q06265 439 aaKnown RBP14.14□□□□□ -0.15
TFF3-203ENST00000489676 TSPYL6Q8N831 410 aa14.14□□□□□ -0.15
TFF3-203ENST00000489676 LOC102724428A0A0B4J2F2 783 aa14.13□□□□□ -0.15
TFF3-203ENST00000489676 PLSCR1O15162 318 aa14.13□□□□□ -0.15
TFF3-203ENST00000489676 PTCD1O75127 700 aaKnown RBP14.13□□□□□ -0.15
TFF3-203ENST00000489676 GIGYF1O75420 1035 aaPredicted RBP14.13□□□□□ -0.15
TFF3-203ENST00000489676 HOXB7P09629 217 aa14.13□□□□□ -0.15
TFF3-203ENST00000489676 SIK1P57059 783 aa14.13□□□□□ -0.15
TFF3-203ENST00000489676 VSIG10Q8N0Z9 540 aa14.13□□□□□ -0.15
TFF3-203ENST00000489676 SOS1Q07889 1333 aaPredicted RBP14.13□□□□□ -0.15
TFF3-203ENST00000489676 NUP188Q5SRE5 1749 aa14.12□□□□□ -0.15
TFF3-203ENST00000489676 PRAMEF22A3QJZ6 481 aa14.12□□□□□ -0.15
TFF3-203ENST00000489676 MYH14Q7Z406 1995 aaKnown RBP14.11□□□□□ -0.15
TFF3-203ENST00000489676 APBA3O96018 575 aa14.11□□□□□ -0.15
TFF3-203ENST00000489676 SNRPA1P09661 255 aaKnown RBP14.11□□□□□ -0.15
TFF3-203ENST00000489676 C4BP0C0L5 1744 aa14.11□□□□□ -0.15
TFF3-203ENST00000489676 ITPK1Q13572 414 aa14.11□□□□□ -0.15
TFF3-203ENST00000489676 VAMP4O75379 141 aa14.1□□□□□ -0.15
TFF3-203ENST00000489676 CT47B1P0C2W7 299 aaPredicted RBP14.1□□□□□ -0.15
TFF3-203ENST00000489676 TWISTNBQ3B726 338 aaPredicted RBP14.1□□□□□ -0.15
TFF3-203ENST00000489676 PROM2Q8N271 834 aa14.1□□□□□ -0.15
TFF3-203ENST00000489676 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
TFF3-203ENST00000489676 LRRC4BQ9NT99 713 aa14.1□□□□□ -0.15
TFF3-203ENST00000489676 SLC27A3Q5K4L6 730 aa14.09□□□□□ -0.15
TFF3-203ENST00000489676 CCDC125Q86Z20 511 aa14.09□□□□□ -0.15
TFF3-203ENST00000489676 DNAJC10Q8IXB1 793 aa14.09□□□□□ -0.15
TFF3-203ENST00000489676 CAMKK2Q96RR4 588 aa14.09□□□□□ -0.15
TFF3-203ENST00000489676 ELL2O00472 640 aaPredicted RBP14.08□□□□□ -0.16
TFF3-203ENST00000489676 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.16
TFF3-203ENST00000489676 ATP6V1AP38606 617 aa14.08□□□□□ -0.16
TFF3-203ENST00000489676 TXNRD1Q16881 649 aa14.08□□□□□ -0.16
TFF3-203ENST00000489676 LINC00116Q8NCU8 138 aa14.08□□□□□ -0.16
TFF3-203ENST00000489676 CCNL1Q9UK58 526 aaPredicted RBP14.08□□□□□ -0.16
TFF3-203ENST00000489676 USP16Q9Y5T5 823 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms