RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
NOD1-208ENST00000489614 SLKQ9H2G2 1235 aaPredicted RBP12.37□□□□□ -0.43
NOD1-208ENST00000489614 ZNF831Q5JPB2 1677 aa12.37□□□□□ -0.43
NOD1-208ENST00000489614 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
NOD1-208ENST00000489614 LMOD3Q0VAK6 560 aa12.36□□□□□ -0.43
NOD1-208ENST00000489614 IPO4Q8TEX9 1081 aaKnown RBP12.36□□□□□ -0.43
NOD1-208ENST00000489614 WDR17Q8IZU2 1322 aa12.36□□□□□ -0.43
NOD1-208ENST00000489614 LRRC59Q96AG4 307 aaKnown RBP12.36□□□□□ -0.43
NOD1-208ENST00000489614 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
NOD1-208ENST00000489614 CHL1O00533 1208 aa12.35□□□□□ -0.43
NOD1-208ENST00000489614 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
NOD1-208ENST00000489614 MYH16Q9H6N6 1097 aa12.35□□□□□ -0.43
NOD1-208ENST00000489614 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
NOD1-208ENST00000489614 BABAM1Q9NWV8 329 aa12.35□□□□□ -0.43
NOD1-208ENST00000489614 RREB1Q92766 1687 aa12.35□□□□□ -0.43
NOD1-208ENST00000489614 HEG1Q9ULI3 1381 aa12.35□□□□□ -0.43
NOD1-208ENST00000489614 DOT1LQ8TEK3 1739 aa12.34□□□□□ -0.43
NOD1-208ENST00000489614 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.34□□□□□ -0.43
NOD1-208ENST00000489614 FAM83GA6ND36 823 aa12.34□□□□□ -0.43
NOD1-208ENST00000489614 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
NOD1-208ENST00000489614 RARSP54136 660 aaKnown RBP12.34□□□□□ -0.43
NOD1-208ENST00000489614 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
NOD1-208ENST00000489614 ZNF830Q96NB3 372 aaPredicted RBP12.33□□□□□ -0.44
NOD1-208ENST00000489614 MBIPQ9NS73 344 aa12.33□□□□□ -0.44
NOD1-208ENST00000489614 RGS12O14924 1447 aa12.32□□□□□ -0.44
NOD1-208ENST00000489614 USHBP1Q8N6Y0 703 aa12.32□□□□□ -0.44
NOD1-208ENST00000489614 TRIM44Q96DX7 344 aaPredicted RBP12.32□□□□□ -0.44
NOD1-208ENST00000489614 NUP188Q5SRE5 1749 aa12.32□□□□□ -0.44
NOD1-208ENST00000489614 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
NOD1-208ENST00000489614 IL17REQ8NFR9 667 aa12.32□□□□□ -0.44
NOD1-208ENST00000489614 GNAI1P63096 354 aa12.31□□□□□ -0.44
NOD1-208ENST00000489614 KCPQ6ZWJ8 1503 aa12.31□□□□□ -0.44
NOD1-208ENST00000489614 SBF2Q86WG5 1849 aa12.31□□□□□ -0.44
NOD1-208ENST00000489614 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
NOD1-208ENST00000489614 TSR2Q969E8 191 aaKnown RBP12.31□□□□□ -0.44
NOD1-208ENST00000489614 THUMPD2Q9BTF0 503 aaKnown RBP12.31□□□□□ -0.44
NOD1-208ENST00000489614 TJP1Q07157 1748 aa12.31□□□□□ -0.44
NOD1-208ENST00000489614 TOM1O60784 492 aa12.31□□□□□ -0.44
NOD1-208ENST00000489614 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
NOD1-208ENST00000489614 AKAP4Q5JQC9 854 aa12.31□□□□□ -0.44
NOD1-208ENST00000489614 ZNF428Q96B54 188 aa12.31□□□□□ -0.44
NOD1-208ENST00000489614 GNAT3A8MTJ3 354 aa12.3□□□□□ -0.44
NOD1-208ENST00000489614 CERKQ8TCT0 537 aa12.3□□□□□ -0.44
NOD1-208ENST00000489614 CARD10Q9BWT7 1032 aa12.3□□□□□ -0.44
NOD1-208ENST00000489614 VAMP4O75379 141 aa12.3□□□□□ -0.44
NOD1-208ENST00000489614 ALDH1L2Q3SY69 923 aa12.3□□□□□ -0.44
NOD1-208ENST00000489614 EXOSC9Q06265 439 aaKnown RBP12.29□□□□□ -0.44
NOD1-208ENST00000489614 DCTN1Q14203 1278 aa12.29□□□□□ -0.44
NOD1-208ENST00000489614 CHRNA2Q15822 529 aa12.29□□□□□ -0.44
NOD1-208ENST00000489614 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
NOD1-208ENST00000489614 SOS1Q07889 1333 aaPredicted RBP12.29□□□□□ -0.44
NOD1-208ENST00000489614 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
NOD1-208ENST00000489614 MCM10Q7L590 875 aa12.29□□□□□ -0.44
NOD1-208ENST00000489614 TMEM51Q9NW97 253 aa12.29□□□□□ -0.44
NOD1-208ENST00000489614 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
NOD1-208ENST00000489614 BCAR3O75815 825 aa12.28□□□□□ -0.44
NOD1-208ENST00000489614 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
NOD1-208ENST00000489614 LTV1Q96GA3 475 aaPredicted RBP12.28□□□□□ -0.44
NOD1-208ENST00000489614 BCL9LQ86UU0 1499 aa12.28□□□□□ -0.44
NOD1-208ENST00000489614 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
NOD1-208ENST00000489614 PPP4R3BQ5MIZ7 849 aa12.28□□□□□ -0.44
NOD1-208ENST00000489614 JCADQ9P266 1359 aa12.27□□□□□ -0.44
NOD1-208ENST00000489614 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
NOD1-208ENST00000489614 PLEKHO1Q53GL0 409 aaPredicted RBP12.26□□□□□ -0.45
NOD1-208ENST00000489614 C20orf194Q5TEA3 1177 aa12.26□□□□□ -0.45
NOD1-208ENST00000489614 ARFGEF2Q9Y6D5 1785 aa12.26□□□□□ -0.45
NOD1-208ENST00000489614 NHSQ6T4R5 1651 aa12.26□□□□□ -0.45
NOD1-208ENST00000489614 TSPYL6Q8N831 410 aa12.26□□□□□ -0.45
NOD1-208ENST00000489614 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
NOD1-208ENST00000489614 PLIN1O60240 522 aa12.26□□□□□ -0.45
NOD1-208ENST00000489614 PHKG2P15735 406 aa12.26□□□□□ -0.45
NOD1-208ENST00000489614 NCLP19338 710 aaKnown RBP12.26□□□□□ -0.45
NOD1-208ENST00000489614 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
NOD1-208ENST00000489614 C8orf58Q8NAV2 365 aa12.26□□□□□ -0.45
NOD1-208ENST00000489614 ZBTB22O15209 634 aa12.25□□□□□ -0.45
NOD1-208ENST00000489614 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
NOD1-208ENST00000489614 PRDM11Q9NQV5 511 aa12.25□□□□□ -0.45
NOD1-208ENST00000489614 PXDNLA1KZ92 1463 aa12.25□□□□□ -0.45
NOD1-208ENST00000489614 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
NOD1-208ENST00000489614 SSH1Q8WYL5 1049 aa12.24□□□□□ -0.45
NOD1-208ENST00000489614 R3HCC1Q9Y3T6 440 aaKnown RBP12.24□□□□□ -0.45
NOD1-208ENST00000489614 CYP27B1O15528 508 aa12.24□□□□□ -0.45
NOD1-208ENST00000489614 LGR6Q9HBX8 967 aa12.24□□□□□ -0.45
NOD1-208ENST00000489614 LY75O60449 1722 aa12.24□□□□□ -0.45
NOD1-208ENST00000489614 FSD2A1L4K1 749 aa12.24□□□□□ -0.45
NOD1-208ENST00000489614 LARP1Q6PKG0 1096 aaKnown RBP12.24□□□□□ -0.45
NOD1-208ENST00000489614 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
NOD1-208ENST00000489614 SPATA31A6Q5VVP1 1343 aa12.23□□□□□ -0.45
NOD1-208ENST00000489614 TAF7Q15545 349 aaPredicted RBP12.22□□□□□ -0.45
NOD1-208ENST00000489614 ARHGAP45Q92619 1136 aa12.22□□□□□ -0.45
NOD1-208ENST00000489614 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
NOD1-208ENST00000489614 ANKRD36CQ5JPF3 1778 aa12.22□□□□□ -0.45
NOD1-208ENST00000489614 DMTNQ08495 405 aa12.22□□□□□ -0.45
NOD1-208ENST00000489614 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
NOD1-208ENST00000489614 ABCC4O15439 1325 aa12.22□□□□□ -0.45
NOD1-208ENST00000489614 MRE11P49959 708 aa12.22□□□□□ -0.45
NOD1-208ENST00000489614 FTSJ3Q8IY81 847 aaKnown RBP12.22□□□□□ -0.45
NOD1-208ENST00000489614 MAP7D2Q96T17 732 aa12.22□□□□□ -0.45
NOD1-208ENST00000489614 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.45
NOD1-208ENST00000489614 SPATA31A1Q5TZJ5 1347 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms