RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ASAP1Q9ULH1 1129 aa10.45□□□□□ -0.74
SSR1-210ENST00000489567 MAP3K5Q99683 1374 aa10.45□□□□□ -0.74
SSR1-210ENST00000489567 SCN11AQ9UI33 1791 aa10.45□□□□□ -0.74
SSR1-210ENST00000489567 ADAMTS7Q9UKP4 1686 aa10.45□□□□□ -0.74
SSR1-210ENST00000489567 CABP4P57796 275 aa10.44□□□□□ -0.74
SSR1-210ENST00000489567 CCDC146Q8IYE0 955 aa10.44□□□□□ -0.74
SSR1-210ENST00000489567 NFATC2IPQ8NCF5 419 aa10.44□□□□□ -0.74
SSR1-210ENST00000489567 RNF39Q9H2S5 420 aa10.44□□□□□ -0.74
SSR1-210ENST00000489567 GNAT3A8MTJ3 354 aa10.44□□□□□ -0.74
SSR1-210ENST00000489567 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
SSR1-210ENST00000489567 ANO8Q9HCE9 1232 aaPredicted RBP10.44□□□□□ -0.74
SSR1-210ENST00000489567 ATG3Q9NT62 314 aa10.44□□□□□ -0.74
SSR1-210ENST00000489567 PALLDQ8WX93 1383 aa10.44□□□□□ -0.74
SSR1-210ENST00000489567 LY75O60449 1722 aa10.43□□□□□ -0.74
SSR1-210ENST00000489567 DCTN1Q14203 1278 aa10.43□□□□□ -0.74
SSR1-210ENST00000489567 MRC1P22897 1456 aa10.43□□□□□ -0.74
SSR1-210ENST00000489567 MCM10Q7L590 875 aa10.42□□□□□ -0.74
SSR1-210ENST00000489567 SLC52A2Q9HAB3 445 aa10.42□□□□□ -0.74
SSR1-210ENST00000489567 MRS2Q9HD23 443 aa10.42□□□□□ -0.74
SSR1-210ENST00000489567 VIRMAQ69YN4 1812 aaKnown RBP10.42□□□□□ -0.74
SSR1-210ENST00000489567 CEMIPQ8WUJ3 1361 aa10.42□□□□□ -0.74
SSR1-210ENST00000489567 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
SSR1-210ENST00000489567 ZBTB22O15209 634 aa10.42□□□□□ -0.74
SSR1-210ENST00000489567 NFE2L2Q16236 605 aa10.42□□□□□ -0.74
SSR1-210ENST00000489567 PNISRQ8TF01 805 aaKnown RBP10.42□□□□□ -0.74
SSR1-210ENST00000489567 PAPPAQ13219 1627 aa10.41□□□□□ -0.74
SSR1-210ENST00000489567 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
SSR1-210ENST00000489567 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
SSR1-210ENST00000489567 CCNL1Q9UK58 526 aaPredicted RBP10.41□□□□□ -0.74
SSR1-210ENST00000489567 RRP7AQ9Y3A4 280 aaKnown RBP10.41□□□□□ -0.74
SSR1-210ENST00000489567 MAPK8IP3Q9UPT6 1336 aa10.41□□□□□ -0.74
SSR1-210ENST00000489567 LOC102724428A0A0B4J2F2 783 aa10.4□□□□□ -0.74
SSR1-210ENST00000489567 SIK1P57059 783 aa10.4□□□□□ -0.74
SSR1-210ENST00000489567 SLC39A6Q13433 755 aa10.4□□□□□ -0.74
SSR1-210ENST00000489567 ZNF827Q17R98 1081 aa10.4□□□□□ -0.74
SSR1-210ENST00000489567 SLC27A3Q5K4L6 730 aa10.4□□□□□ -0.74
SSR1-210ENST00000489567 DLG5Q8TDM6 1919 aa10.4□□□□□ -0.74
SSR1-210ENST00000489567 SMARCC1Q92922 1105 aaPredicted RBP10.4□□□□□ -0.74
SSR1-210ENST00000489567 RUNDC1Q96C34 613 aa10.4□□□□□ -0.74
SSR1-210ENST00000489567 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
SSR1-210ENST00000489567 PNNQ9H307 717 aaKnown RBP10.4□□□□□ -0.74
SSR1-210ENST00000489567 NEFMP07197 916 aa10.4□□□□□ -0.75
SSR1-210ENST00000489567 TMPOP42166 694 aaKnown RBP10.4□□□□□ -0.75
SSR1-210ENST00000489567 PTCD1O75127 700 aaKnown RBP10.39□□□□□ -0.75
SSR1-210ENST00000489567 ITPK1Q13572 414 aa10.39□□□□□ -0.75
SSR1-210ENST00000489567 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
SSR1-210ENST00000489567 RTF1Q92541 710 aaKnown RBP10.39□□□□□ -0.75
SSR1-210ENST00000489567 PDGFDQ9GZP0 370 aaPredicted RBP10.39□□□□□ -0.75
SSR1-210ENST00000489567 SIPA1L3O60292 1781 aaPredicted RBP10.39□□□□□ -0.75
SSR1-210ENST00000489567 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 HTATSF1O43719 755 aaKnown RBP10.38□□□□□ -0.75
SSR1-210ENST00000489567 RIPK4P57078 832 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 TEFQ10587 303 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 NEUROD2Q15784 382 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 SLC15A2Q16348 729 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 NBPF14Q5TI25 921 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 AKT1S1Q96B36 256 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
SSR1-210ENST00000489567 APAF1O14727 1248 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 KCNQ3O43525 872 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 ATP6V1AP38606 617 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 LINC00116Q8NCU8 138 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 KCPQ6ZWJ8 1503 aa10.38□□□□□ -0.75
SSR1-210ENST00000489567 SRCAPQ6ZRS2 3230 aa10.37□□□□□ -0.75
SSR1-210ENST00000489567 AMIGO3Q86WK7 504 aa10.37□□□□□ -0.75
SSR1-210ENST00000489567 TRIM35Q9UPQ4 493 aa10.37□□□□□ -0.75
SSR1-210ENST00000489567 C5P01031 1676 aa10.37□□□□□ -0.75
SSR1-210ENST00000489567 TAF1LQ8IZX4 1826 aa10.37□□□□□ -0.75
SSR1-210ENST00000489567 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
SSR1-210ENST00000489567 SMIM5Q71RC9 77 aa10.36□□□□□ -0.75
SSR1-210ENST00000489567 STK32BQ9NY57 414 aa10.36□□□□□ -0.75
SSR1-210ENST00000489567 MIS18AQ9NYP9 233 aa10.36□□□□□ -0.75
SSR1-210ENST00000489567 BTBD11A6QL63 1104 aa10.36□□□□□ -0.75
SSR1-210ENST00000489567 FAM9BQ8IZU0 186 aa10.36□□□□□ -0.75
SSR1-210ENST00000489567 ZNF496Q96IT1 587 aaPredicted RBP10.36□□□□□ -0.75
SSR1-210ENST00000489567 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
SSR1-210ENST00000489567 UBR2Q8IWV8 1755 aa10.35□□□□□ -0.75
SSR1-210ENST00000489567 MIER1Q8N108 512 aa10.35□□□□□ -0.75
SSR1-210ENST00000489567 PNPLA7Q6ZV29 1317 aa10.35□□□□□ -0.75
SSR1-210ENST00000489567 TJP1Q07157 1748 aa10.34□□□□□ -0.75
SSR1-210ENST00000489567 TAF7Q15545 349 aaPredicted RBP10.34□□□□□ -0.75
SSR1-210ENST00000489567 DNAJC10Q8IXB1 793 aa10.34□□□□□ -0.75
SSR1-210ENST00000489567 TFCP2L1Q9NZI6 479 aa10.34□□□□□ -0.75
SSR1-210ENST00000489567 TUBGCP6Q96RT7 1819 aa10.34□□□□□ -0.75
SSR1-210ENST00000489567 ZNF831Q5JPB2 1677 aa10.34□□□□□ -0.75
SSR1-210ENST00000489567 TTC5Q8N0Z6 440 aa10.34□□□□□ -0.75
SSR1-210ENST00000489567 CASZ1Q86V15 1759 aa10.34□□□□□ -0.75
SSR1-210ENST00000489567 COL5A3P25940 1745 aaPredicted RBP10.33□□□□□ -0.76
SSR1-210ENST00000489567 PRAMEF22A3QJZ6 481 aa10.33□□□□□ -0.76
SSR1-210ENST00000489567 CICQ96RK0 1608 aaPredicted RBP10.32□□□□□ -0.76
SSR1-210ENST00000489567 CCER2I3L3R5 266 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 LMOD3Q0VAK6 560 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 AK7Q96M32 723 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 HEG1Q9ULI3 1381 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 GNPATO15228 680 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 ZBTB7AO95365 584 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 CYP19A1P11511 503 aaPredicted RBP10.32□□□□□ -0.76
SSR1-210ENST00000489567 CRKLP46109 303 aaKnown RBP10.32□□□□□ -0.76
SSR1-210ENST00000489567 PLCB2Q00722 1185 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 C1QBPQ07021 282 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms