RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SLC52A2Q9HAB3 445 aa19.98■□□□□ 0.79
CXCL12-207ENST00000488591 RTF1Q92541 710 aaKnown RBP19.97■□□□□ 0.79
CXCL12-207ENST00000488591 MAPK8IP3Q9UPT6 1336 aa19.97■□□□□ 0.79
CXCL12-207ENST00000488591 LOC102724428A0A0B4J2F2 783 aa19.96■□□□□ 0.79
CXCL12-207ENST00000488591 SIK1P57059 783 aa19.96■□□□□ 0.79
CXCL12-207ENST00000488591 TEFQ10587 303 aa19.95■□□□□ 0.78
CXCL12-207ENST00000488591 VIRMAQ69YN4 1812 aaKnown RBP19.95■□□□□ 0.78
CXCL12-207ENST00000488591 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
CXCL12-207ENST00000488591 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
CXCL12-207ENST00000488591 PLEKHF1Q96S99 279 aa19.94■□□□□ 0.78
CXCL12-207ENST00000488591 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
CXCL12-207ENST00000488591 TFCP2L1Q9NZI6 479 aa19.94■□□□□ 0.78
CXCL12-207ENST00000488591 HTATSF1O43719 755 aaKnown RBP19.93■□□□□ 0.78
CXCL12-207ENST00000488591 IL17REQ8NFR9 667 aa19.93■□□□□ 0.78
CXCL12-207ENST00000488591 AKT1S1Q96B36 256 aa19.93■□□□□ 0.78
CXCL12-207ENST00000488591 ADAMTS7Q9UKP4 1686 aa19.93■□□□□ 0.78
CXCL12-207ENST00000488591 ZNF827Q17R98 1081 aa19.92■□□□□ 0.78
CXCL12-207ENST00000488591 MRC1P22897 1456 aa19.92■□□□□ 0.78
CXCL12-207ENST00000488591 NFE2L2Q16236 605 aa19.91■□□□□ 0.78
CXCL12-207ENST00000488591 C5P01031 1676 aa19.91■□□□□ 0.78
CXCL12-207ENST00000488591 PTCD1O75127 700 aaKnown RBP19.9■□□□□ 0.78
CXCL12-207ENST00000488591 ADAMTS8Q9UP79 889 aa19.9■□□□□ 0.78
CXCL12-207ENST00000488591 TAF1LQ8IZX4 1826 aa19.89■□□□□ 0.77
CXCL12-207ENST00000488591 TTC5Q8N0Z6 440 aa19.89■□□□□ 0.77
CXCL12-207ENST00000488591 CEMIPQ8WUJ3 1361 aa19.89■□□□□ 0.77
CXCL12-207ENST00000488591 AK7Q96M32 723 aa19.89■□□□□ 0.77
CXCL12-207ENST00000488591 MCM10Q7L590 875 aa19.88■□□□□ 0.77
CXCL12-207ENST00000488591 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
CXCL12-207ENST00000488591 SLC39A6Q13433 755 aa19.87■□□□□ 0.77
CXCL12-207ENST00000488591 ITPK1Q13572 414 aa19.87■□□□□ 0.77
CXCL12-207ENST00000488591 FLAD1Q8NFF5 587 aa19.87■□□□□ 0.77
CXCL12-207ENST00000488591 SPON1Q9HCB6 807 aa19.87■□□□□ 0.77
CXCL12-207ENST00000488591 ZNF831Q5JPB2 1677 aa19.87■□□□□ 0.77
CXCL12-207ENST00000488591 C4BP0C0L5 1744 aa19.86■□□□□ 0.77
CXCL12-207ENST00000488591 CCDC146Q8IYE0 955 aa19.86■□□□□ 0.77
CXCL12-207ENST00000488591 LINC00116Q8NCU8 138 aa19.86■□□□□ 0.77
CXCL12-207ENST00000488591 QSER1Q2KHR3 1735 aa19.85■□□□□ 0.77
CXCL12-207ENST00000488591 BTBD11A6QL63 1104 aa19.85■□□□□ 0.77
CXCL12-207ENST00000488591 RIPK4P57078 832 aa19.85■□□□□ 0.77
CXCL12-207ENST00000488591 DCTN1Q14203 1278 aa19.85■□□□□ 0.77
CXCL12-207ENST00000488591 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
CXCL12-207ENST00000488591 PDGFDQ9GZP0 370 aaPredicted RBP19.85■□□□□ 0.77
CXCL12-207ENST00000488591 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
CXCL12-207ENST00000488591 CASZ1Q86V15 1759 aa19.85■□□□□ 0.77
CXCL12-207ENST00000488591 DLG5Q8TDM6 1919 aa19.84■□□□□ 0.77
CXCL12-207ENST00000488591 PNPLA7Q6ZV29 1317 aa19.84■□□□□ 0.77
CXCL12-207ENST00000488591 ZBTB7AO95365 584 aa19.84■□□□□ 0.77
CXCL12-207ENST00000488591 LMOD3Q0VAK6 560 aa19.84■□□□□ 0.77
CXCL12-207ENST00000488591 SLC16A10Q8TF71 515 aa19.84■□□□□ 0.77
CXCL12-207ENST00000488591 SIPA1L3O60292 1781 aaPredicted RBP19.83■□□□□ 0.77
CXCL12-207ENST00000488591 TMPOP42166 694 aaKnown RBP19.83■□□□□ 0.77
CXCL12-207ENST00000488591 ZNF790Q6PG37 636 aa19.83■□□□□ 0.77
CXCL12-207ENST00000488591 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.77
CXCL12-207ENST00000488591 MTFR1LQ9H019 292 aa19.83■□□□□ 0.77
CXCL12-207ENST00000488591 LRP5O75197 1615 aa19.83■□□□□ 0.76
CXCL12-207ENST00000488591 GNPATO15228 680 aa19.82■□□□□ 0.76
CXCL12-207ENST00000488591 TAF7Q15545 349 aaPredicted RBP19.82■□□□□ 0.76
CXCL12-207ENST00000488591 CCDC184Q52MB2 194 aa19.82■□□□□ 0.76
CXCL12-207ENST00000488591 RC3H1Q5TC82 1133 aaKnown RBP19.82■□□□□ 0.76
CXCL12-207ENST00000488591 NEUROD2Q15784 382 aa19.81■□□□□ 0.76
CXCL12-207ENST00000488591 PNISRQ8TF01 805 aaKnown RBP19.81■□□□□ 0.76
CXCL12-207ENST00000488591 FMNL2Q96PY5 1086 aa19.81■□□□□ 0.76
CXCL12-207ENST00000488591 ATF5Q9Y2D1 282 aaPredicted RBP19.81■□□□□ 0.76
CXCL12-207ENST00000488591 TUBGCP6Q96RT7 1819 aa19.81■□□□□ 0.76
CXCL12-207ENST00000488591 CNTNAP4Q9C0A0 1308 aa19.8■□□□□ 0.76
CXCL12-207ENST00000488591 SSFA2P28290 1259 aa19.8■□□□□ 0.76
CXCL12-207ENST00000488591 COL23A1Q86Y22 540 aaPredicted RBP19.8■□□□□ 0.76
CXCL12-207ENST00000488591 RTCBQ9Y3I0 505 aaKnown RBP19.8■□□□□ 0.76
CXCL12-207ENST00000488591 KCPQ6ZWJ8 1503 aa19.8■□□□□ 0.76
CXCL12-207ENST00000488591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.79■□□□□ 0.76
CXCL12-207ENST00000488591 PHF14O94880 888 aa19.79■□□□□ 0.76
CXCL12-207ENST00000488591 DNAJC10Q8IXB1 793 aa19.79■□□□□ 0.76
CXCL12-207ENST00000488591 TEX13AQ9BXU3 409 aaPredicted RBP19.79■□□□□ 0.76
CXCL12-207ENST00000488591 PPP1R1BQ9UD71 204 aaPredicted RBP19.79■□□□□ 0.76
CXCL12-207ENST00000488591 RRP7AQ9Y3A4 280 aaKnown RBP19.79■□□□□ 0.76
CXCL12-207ENST00000488591 UBR2Q8IWV8 1755 aa19.78■□□□□ 0.76
CXCL12-207ENST00000488591 ADRA2BP18089 450 aa19.78■□□□□ 0.76
CXCL12-207ENST00000488591 CRKLP46109 303 aaKnown RBP19.78■□□□□ 0.76
CXCL12-207ENST00000488591 ZNF496Q96IT1 587 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-207ENST00000488591 COL5A3P25940 1745 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-207ENST00000488591 CICQ96RK0 1608 aaPredicted RBP19.77■□□□□ 0.76
CXCL12-207ENST00000488591 TJP1Q07157 1748 aa19.77■□□□□ 0.76
CXCL12-207ENST00000488591 RPS6KA4O75676 772 aa19.77■□□□□ 0.76
CXCL12-207ENST00000488591 TRAPPC3LQ5T215 181 aa19.77■□□□□ 0.76
CXCL12-207ENST00000488591 THUMPD2Q9BTF0 503 aaKnown RBP19.77■□□□□ 0.76
CXCL12-207ENST00000488591 HEG1Q9ULI3 1381 aa19.77■□□□□ 0.76
CXCL12-207ENST00000488591 UBR3Q6ZT12 1888 aa19.77■□□□□ 0.76
CXCL12-207ENST00000488591 STARD3NLO95772 234 aa19.76■□□□□ 0.75
CXCL12-207ENST00000488591 KCNQ3O43525 872 aa19.75■□□□□ 0.75
CXCL12-207ENST00000488591 CYP19A1P11511 503 aaPredicted RBP19.75■□□□□ 0.75
CXCL12-207ENST00000488591 POLD1P28340 1107 aa19.75■□□□□ 0.75
CXCL12-207ENST00000488591 CCDC87Q9NVE4 849 aa19.75■□□□□ 0.75
CXCL12-207ENST00000488591 MIS18AQ9NYP9 233 aa19.75■□□□□ 0.75
CXCL12-207ENST00000488591 APAF1O14727 1248 aa19.74■□□□□ 0.75
CXCL12-207ENST00000488591 AMIGO3Q86WK7 504 aa19.74■□□□□ 0.75
CXCL12-207ENST00000488591 PTGER2P43116 358 aa19.73■□□□□ 0.75
CXCL12-207ENST00000488591 INTS5Q6P9B9 1019 aaKnown RBP19.73■□□□□ 0.75
CXCL12-207ENST00000488591 SMIM5Q71RC9 77 aa19.73■□□□□ 0.75
CXCL12-207ENST00000488591 SNRPA1P09661 255 aaKnown RBP19.72■□□□□ 0.75
CXCL12-207ENST00000488591 RFC4P35249 363 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms