RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 HSCBQ8IWL3 235 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 NEK11Q8NG66 645 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 A1CFQ9NQ94 594 aaKnown RBP7.59□□□□□ -1.19
SIK3-212ENST00000488337 UHRF1BP1Q6BDS2 1440 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 PAX7P23759 505 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 CALRP27797 417 aaKnown RBP7.59□□□□□ -1.19
SIK3-212ENST00000488337 ADCY2Q08462 1091 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 GRIK3Q13003 919 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 CADPS2Q86UW7 1296 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 GOLGA5Q8TBA6 731 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 DEF6Q9H4E7 631 aa7.59□□□□□ -1.19
SIK3-212ENST00000488337 TTC12Q9H892 705 aaPredicted RBP7.59□□□□□ -1.19
SIK3-212ENST00000488337 CWC22Q9HCG8 908 aaKnown RBP7.59□□□□□ -1.19
SIK3-212ENST00000488337 C9orf84Q5VXU9 1444 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 APAF1O14727 1248 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 E2F4Q16254 413 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 STAG1Q8WVM7 1258 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 ATP10AO60312 1499 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 FAM135AQ9P2D6 1515 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 ZRANB2O95218 330 aaKnown RBP eCLIP7.58□□□□□ -1.2
SIK3-212ENST00000488337 TNNT1P13805 278 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 IRX1P78414 480 aaPredicted RBP7.58□□□□□ -1.2
SIK3-212ENST00000488337 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 NEUROD2Q15784 382 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 MIEF2Q96C03 454 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 ETAA1Q9NY74 926 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 PYCARDQ9ULZ3 195 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 DMRT2Q9Y5R5 561 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 KIAA0556O60303 1618 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 DNMT1P26358 1616 aaKnown RBP7.58□□□□□ -1.2
SIK3-212ENST00000488337 RABEP1Q15276 862 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 ANKRD20A12PQ8NF67 263 aa7.58□□□□□ -1.2
SIK3-212ENST00000488337 EFCAB2Q5VUJ9 269 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 GOLGA6L1Q8N7Z2 621 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 CCDC191Q8NCU4 936 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 GPATCH8Q9UKJ3 1502 aaKnown RBP7.57□□□□□ -1.2
SIK3-212ENST00000488337 PTPRGP23470 1445 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 NUP153P49790 1475 aaKnown RBP7.57□□□□□ -1.2
SIK3-212ENST00000488337 PPP2R1AP30153 589 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 SMARCE1Q969G3 411 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 SMC3Q9UQE7 1217 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 CD2BP2O95400 341 aaKnown RBP7.57□□□□□ -1.2
SIK3-212ENST00000488337 JAKMIP3Q5VZ66 844 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 SKILP12757 684 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 SCP2P22307 547 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 ST5P78524 1137 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 TBC1D25Q3MII6 688 aa7.57□□□□□ -1.2
SIK3-212ENST00000488337 CORO7P57737 925 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 SLC5A9Q2M3M2 681 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 KLHL23Q8NBE8 558 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 ERCC4Q92889 916 aaPredicted RBP7.56□□□□□ -1.2
SIK3-212ENST00000488337 CHD1O14646 1710 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 RTN2O75298 545 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 NEFHP12036 1026 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 NUCKS1Q9H1E3 243 aaKnown RBP7.56□□□□□ -1.2
SIK3-212ENST00000488337 LRRIQ1Q96JM4 1722 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 GOLGA6L22H0YM25 854 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 GGT6Q6P531 493 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.56□□□□□ -1.22e-7■■■■■ 114.5
SIK3-212ENST00000488337 EXOC6BQ9Y2D4 811 aa7.56□□□□□ -1.2
SIK3-212ENST00000488337 LRRFIP2Q9Y608 721 aaKnown RBP7.56□□□□□ -1.2
SIK3-212ENST00000488337 ERCC3P19447 782 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 PROM2Q8N271 834 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 RBM27Q9P2N5 1060 aaKnown RBP7.55□□□□□ -1.2
SIK3-212ENST00000488337 NSFL1CQ9UNZ2 370 aaKnown RBP7.55□□□□□ -1.2
SIK3-212ENST00000488337 COG6Q9Y2V7 657 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 ABCC2Q92887 1545 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 DISP1Q96F81 1524 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 BCAR3O75815 825 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 PPM1EQ8WY54 764 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 TESK2Q96S53 571 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 KDM5DQ9BY66 1539 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 H0YHG0 523 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 SARNPP82979 210 aaKnown RBP7.55□□□□□ -1.2
SIK3-212ENST00000488337 CCDC26Q8TAB7 109 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
SIK3-212ENST00000488337 V9GYY5 206 aaPredicted RBP7.55□□□□□ -1.2
SIK3-212ENST00000488337 SYCE3A1L190 88 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 PNMA6AP0CW24 399 aaPredicted RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 SLFN5Q08AF3 891 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 TTC19Q6DKK2 380 aaPredicted RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 ZNF483Q8TF39 744 aaPredicted RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 KCNB2Q92953 911 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 MMTAG2Q9BU76 263 aaKnown RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 PCDHGA4Q9Y5G9 962 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 ARHGEF12Q9NZN5 1544 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 NAIF1Q69YI7 327 aaPredicted RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 ERBINQ96RT1 1412 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 CWC15Q9P013 229 aaKnown RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 DISP3Q9P2K9 1392 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 EIF3CLB5ME19 914 aaKnown RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 CAND2O75155 1236 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 NUCB2P80303 420 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 DDX46Q7L014 1031 aaKnown RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 EIF3CQ99613 913 aaKnown RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 PHF8Q9UPP1 1060 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 PLCB2Q00722 1185 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 ICA1Q05084 483 aa7.54□□□□□ -1.2
SIK3-212ENST00000488337 HDAC1Q13547 482 aaPredicted RBP7.54□□□□□ -1.2
SIK3-212ENST00000488337 GAS2L2Q8NHY3 880 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms