RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 TXNRD1Q16881 649 aa20.71■□□□□ 0.91
C9orf3-219ENST00000488186 SLC27A3Q5K4L6 730 aa20.71■□□□□ 0.91
C9orf3-219ENST00000488186 SMARCC1Q92922 1105 aaPredicted RBP20.71■□□□□ 0.91
C9orf3-219ENST00000488186 RRP7AQ9Y3A4 280 aaKnown RBP20.71■□□□□ 0.91
C9orf3-219ENST00000488186 MCM10Q7L590 875 aa20.7■□□□□ 0.9
C9orf3-219ENST00000488186 IL17REQ8NFR9 667 aa20.7■□□□□ 0.9
C9orf3-219ENST00000488186 SLC52A2Q9HAB3 445 aa20.7■□□□□ 0.9
C9orf3-219ENST00000488186 KDM6AO15550 1401 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-219ENST00000488186 APAF1O14727 1248 aa20.69■□□□□ 0.9
C9orf3-219ENST00000488186 NBPF14Q5TI25 921 aa20.69■□□□□ 0.9
C9orf3-219ENST00000488186 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
C9orf3-219ENST00000488186 DCTN1Q14203 1278 aa20.68■□□□□ 0.9
C9orf3-219ENST00000488186 ADAMTS7Q9UKP4 1686 aa20.67■□□□□ 0.9
C9orf3-219ENST00000488186 ASAP1Q9ULH1 1129 aa20.66■□□□□ 0.9
C9orf3-219ENST00000488186 VIRMAQ69YN4 1812 aaKnown RBP20.64■□□□□ 0.9
C9orf3-219ENST00000488186 ATG3Q9NT62 314 aa20.64■□□□□ 0.89
C9orf3-219ENST00000488186 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
C9orf3-219ENST00000488186 PALLDQ8WX93 1383 aa20.63■□□□□ 0.89
C9orf3-219ENST00000488186 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
C9orf3-219ENST00000488186 TTC5Q8N0Z6 440 aa20.63■□□□□ 0.89
C9orf3-219ENST00000488186 RBM42Q9BTD8 480 aaKnown RBP20.63■□□□□ 0.89
C9orf3-219ENST00000488186 ZNF831Q5JPB2 1677 aa20.62■□□□□ 0.89
C9orf3-219ENST00000488186 SENP3-EIF4A1A0A087X0R7 540 aa20.62■□□□□ 0.89
C9orf3-219ENST00000488186 TAF7Q15545 349 aaPredicted RBP20.62■□□□□ 0.89
C9orf3-219ENST00000488186 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
C9orf3-219ENST00000488186 CEMIPQ8WUJ3 1361 aa20.61■□□□□ 0.89
C9orf3-219ENST00000488186 THUMPD2Q9BTF0 503 aaKnown RBP20.61■□□□□ 0.89
C9orf3-219ENST00000488186 LRRC4BQ9NT99 713 aa20.61■□□□□ 0.89
C9orf3-219ENST00000488186 MRC1P22897 1456 aa20.61■□□□□ 0.89
C9orf3-219ENST00000488186 PTCD1O75127 700 aaKnown RBP20.6■□□□□ 0.89
C9orf3-219ENST00000488186 SLC39A6Q13433 755 aa20.6■□□□□ 0.89
C9orf3-219ENST00000488186 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
C9orf3-219ENST00000488186 LOC102724428A0A0B4J2F2 783 aa20.59■□□□□ 0.89
C9orf3-219ENST00000488186 SIK1P57059 783 aa20.59■□□□□ 0.89
C9orf3-219ENST00000488186 TRIM35Q9UPQ4 493 aa20.59■□□□□ 0.89
C9orf3-219ENST00000488186 DLG5Q8TDM6 1919 aa20.59■□□□□ 0.89
C9orf3-219ENST00000488186 QSER1Q2KHR3 1735 aa20.58■□□□□ 0.89
C9orf3-219ENST00000488186 TAF1LQ8IZX4 1826 aa20.58■□□□□ 0.89
C9orf3-219ENST00000488186 ATP6V1AP38606 617 aa20.58■□□□□ 0.89
C9orf3-219ENST00000488186 CALD1Q05682 793 aaKnown RBP20.58■□□□□ 0.89
C9orf3-219ENST00000488186 SLC15A2Q16348 729 aa20.58■□□□□ 0.89
C9orf3-219ENST00000488186 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.89
C9orf3-219ENST00000488186 KCNQ4P56696 695 aa20.57■□□□□ 0.88
C9orf3-219ENST00000488186 R3HDM1Q15032 1099 aaKnown RBP20.57■□□□□ 0.88
C9orf3-219ENST00000488186 ZNF790Q6PG37 636 aa20.57■□□□□ 0.88
C9orf3-219ENST00000488186 STK32BQ9NY57 414 aa20.57■□□□□ 0.88
C9orf3-219ENST00000488186 AKT1S1Q96B36 256 aa20.56■□□□□ 0.88
C9orf3-219ENST00000488186 ANO8Q9HCE9 1232 aaPredicted RBP20.56■□□□□ 0.88
C9orf3-219ENST00000488186 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
C9orf3-219ENST00000488186 TSPYL4Q9UJ04 414 aa20.55■□□□□ 0.88
C9orf3-219ENST00000488186 C5P01031 1676 aa20.54■□□□□ 0.88
C9orf3-219ENST00000488186 NGEFQ8N5V2 710 aa20.54■□□□□ 0.88
C9orf3-219ENST00000488186 FMNL2Q96PY5 1086 aa20.54■□□□□ 0.88
C9orf3-219ENST00000488186 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
C9orf3-219ENST00000488186 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
C9orf3-219ENST00000488186 CCDC27Q2M243 656 aa20.53■□□□□ 0.88
C9orf3-219ENST00000488186 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
C9orf3-219ENST00000488186 PSDA5PKW4 1024 aaPredicted RBP20.52■□□□□ 0.88
C9orf3-219ENST00000488186 BABAM1Q9NWV8 329 aa20.52■□□□□ 0.88
C9orf3-219ENST00000488186 CASZ1Q86V15 1759 aa20.51■□□□□ 0.87
C9orf3-219ENST00000488186 SRCAPQ6ZRS2 3230 aa20.51■□□□□ 0.87
C9orf3-219ENST00000488186 KCNQ3O43525 872 aa20.51■□□□□ 0.87
C9orf3-219ENST00000488186 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
C9orf3-219ENST00000488186 ZNF496Q96IT1 587 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-219ENST00000488186 LRP5O75197 1615 aa20.51■□□□□ 0.87
C9orf3-219ENST00000488186 GNAI1P63096 354 aa20.5■□□□□ 0.87
C9orf3-219ENST00000488186 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
C9orf3-219ENST00000488186 AK7Q96M32 723 aa20.5■□□□□ 0.87
C9orf3-219ENST00000488186 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
C9orf3-219ENST00000488186 TEX13AQ9BXU3 409 aaPredicted RBP20.49■□□□□ 0.87
C9orf3-219ENST00000488186 TFCP2L1Q9NZI6 479 aa20.49■□□□□ 0.87
C9orf3-219ENST00000488186 C4BP0C0L5 1744 aa20.48■□□□□ 0.87
C9orf3-219ENST00000488186 ITPK1Q13572 414 aa20.48■□□□□ 0.87
C9orf3-219ENST00000488186 ZNF827Q17R98 1081 aa20.48■□□□□ 0.87
C9orf3-219ENST00000488186 FLAD1Q8NFF5 587 aa20.48■□□□□ 0.87
C9orf3-219ENST00000488186 SLC16A10Q8TF71 515 aa20.48■□□□□ 0.87
C9orf3-219ENST00000488186 SLC4A9Q96Q91 983 aa20.48■□□□□ 0.87
C9orf3-219ENST00000488186 IFT57Q9NWB7 429 aa20.48■□□□□ 0.87
C9orf3-219ENST00000488186 UBR2Q8IWV8 1755 aa20.48■□□□□ 0.87
C9orf3-219ENST00000488186 CHL1O00533 1208 aa20.47■□□□□ 0.87
C9orf3-219ENST00000488186 STARD3NLO95772 234 aa20.47■□□□□ 0.87
C9orf3-219ENST00000488186 SNRPA1P09661 255 aaKnown RBP20.47■□□□□ 0.87
C9orf3-219ENST00000488186 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
C9orf3-219ENST00000488186 WDR63Q8IWG1 891 aa20.47■□□□□ 0.87
C9orf3-219ENST00000488186 DNAJC10Q8IXB1 793 aa20.47■□□□□ 0.87
C9orf3-219ENST00000488186 LINC00116Q8NCU8 138 aa20.47■□□□□ 0.87
C9orf3-219ENST00000488186 COL5A3P25940 1745 aaPredicted RBP20.47■□□□□ 0.87
C9orf3-219ENST00000488186 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
C9orf3-219ENST00000488186 TUBGCP6Q96RT7 1819 aa20.46■□□□□ 0.87
C9orf3-219ENST00000488186 EIF4A1P60842 406 aaKnown RBP20.45■□□□□ 0.86
C9orf3-219ENST00000488186 UBR3Q6ZT12 1888 aa20.45■□□□□ 0.86
C9orf3-219ENST00000488186 MSH5O43196 834 aa20.44■□□□□ 0.86
C9orf3-219ENST00000488186 COL24A1Q17RW2 1714 aa20.44■□□□□ 0.86
C9orf3-219ENST00000488186 KCPQ6ZWJ8 1503 aa20.43■□□□□ 0.86
C9orf3-219ENST00000488186 MBIPQ9NS73 344 aa20.43■□□□□ 0.86
C9orf3-219ENST00000488186 IL16Q14005 1332 aa20.43■□□□□ 0.86
C9orf3-219ENST00000488186 PNPLA7Q6ZV29 1317 aa20.43■□□□□ 0.86
C9orf3-219ENST00000488186 CNTNAP4Q9C0A0 1308 aa20.43■□□□□ 0.86
C9orf3-219ENST00000488186 GNPATO15228 680 aa20.42■□□□□ 0.86
C9orf3-219ENST00000488186 ZNF853P0CG23 659 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms