RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
LCN2-205ENST00000487719 TFCP2L1Q9NZI6 479 aa12.42□□□□□ -0.42
LCN2-205ENST00000487719 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
LCN2-205ENST00000487719 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
LCN2-205ENST00000487719 PRKRIP1Q9H875 184 aaPredicted RBP12.41□□□□□ -0.42
LCN2-205ENST00000487719 ANO8Q9HCE9 1232 aaPredicted RBP12.41□□□□□ -0.42
LCN2-205ENST00000487719 MRC1P22897 1456 aa12.4□□□□□ -0.42
LCN2-205ENST00000487719 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.42
LCN2-205ENST00000487719 LOC102724428A0A0B4J2F2 783 aa12.4□□□□□ -0.42
LCN2-205ENST00000487719 RNMTO43148 476 aaKnown RBP12.4□□□□□ -0.42
LCN2-205ENST00000487719 ANP32CO43423 234 aa12.4□□□□□ -0.42
LCN2-205ENST00000487719 SIK1P57059 783 aa12.4□□□□□ -0.42
LCN2-205ENST00000487719 AK7Q96M32 723 aa12.4□□□□□ -0.42
LCN2-205ENST00000487719 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
LCN2-205ENST00000487719 SLC52A2Q9HAB3 445 aa12.4□□□□□ -0.42
LCN2-205ENST00000487719 SPON1Q9HCB6 807 aa12.4□□□□□ -0.42
LCN2-205ENST00000487719 LRRC4BQ9NT99 713 aa12.4□□□□□ -0.42
LCN2-205ENST00000487719 PPP1R1BQ9UD71 204 aaPredicted RBP12.4□□□□□ -0.42
LCN2-205ENST00000487719 MSH5O43196 834 aa12.39□□□□□ -0.43
LCN2-205ENST00000487719 ATP6V1AP38606 617 aa12.39□□□□□ -0.43
LCN2-205ENST00000487719 TTC5Q8N0Z6 440 aa12.39□□□□□ -0.43
LCN2-205ENST00000487719 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
LCN2-205ENST00000487719 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
LCN2-205ENST00000487719 ASAP1Q9ULH1 1129 aa12.39□□□□□ -0.43
LCN2-205ENST00000487719 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
LCN2-205ENST00000487719 ATG3Q9NT62 314 aa12.38□□□□□ -0.43
LCN2-205ENST00000487719 CICQ96RK0 1608 aaPredicted RBP12.37□□□□□ -0.43
LCN2-205ENST00000487719 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
LCN2-205ENST00000487719 KCNQ4P56696 695 aa12.37□□□□□ -0.43
LCN2-205ENST00000487719 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
LCN2-205ENST00000487719 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
LCN2-205ENST00000487719 PTCD1O75127 700 aaKnown RBP12.36□□□□□ -0.43
LCN2-205ENST00000487719 ZNF827Q17R98 1081 aa12.36□□□□□ -0.43
LCN2-205ENST00000487719 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
LCN2-205ENST00000487719 MTFR1LQ9H019 292 aa12.36□□□□□ -0.43
LCN2-205ENST00000487719 LGR6Q9HBX8 967 aa12.36□□□□□ -0.43
LCN2-205ENST00000487719 SRCAPQ6ZRS2 3230 aa12.36□□□□□ -0.43
LCN2-205ENST00000487719 TJP1Q07157 1748 aa12.36□□□□□ -0.43
LCN2-205ENST00000487719 POLD1P28340 1107 aa12.35□□□□□ -0.43
LCN2-205ENST00000487719 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
LCN2-205ENST00000487719 PHACTR3Q96KR7 559 aa12.35□□□□□ -0.43
LCN2-205ENST00000487719 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
LCN2-205ENST00000487719 CEMIPQ8WUJ3 1361 aa12.33□□□□□ -0.44
LCN2-205ENST00000487719 GNPATO15228 680 aa12.33□□□□□ -0.44
LCN2-205ENST00000487719 SSFA2P28290 1259 aa12.33□□□□□ -0.44
LCN2-205ENST00000487719 NFE2L2Q16236 605 aa12.33□□□□□ -0.44
LCN2-205ENST00000487719 PNPLA7Q6ZV29 1317 aa12.33□□□□□ -0.44
LCN2-205ENST00000487719 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
LCN2-205ENST00000487719 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
LCN2-205ENST00000487719 BTBD11A6QL63 1104 aa12.32□□□□□ -0.44
LCN2-205ENST00000487719 PHF14O94880 888 aa12.32□□□□□ -0.44
LCN2-205ENST00000487719 NPM2Q86SE8 214 aaKnown RBP12.32□□□□□ -0.44
LCN2-205ENST00000487719 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
LCN2-205ENST00000487719 LINC00116Q8NCU8 138 aa12.32□□□□□ -0.44
LCN2-205ENST00000487719 PNISRQ8TF01 805 aaKnown RBP12.32□□□□□ -0.44
LCN2-205ENST00000487719 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
LCN2-205ENST00000487719 RTCBQ9Y3I0 505 aaKnown RBP12.32□□□□□ -0.44
LCN2-205ENST00000487719 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
LCN2-205ENST00000487719 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 ADRA2BP18089 450 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 SLC39A6Q13433 755 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
LCN2-205ENST00000487719 ZNF790Q6PG37 636 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 MCM10Q7L590 875 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 IL17REQ8NFR9 667 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 RUNDC1Q96C34 613 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 FMNL2Q96PY5 1086 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 TEX13AQ9BXU3 409 aaPredicted RBP12.31□□□□□ -0.44
LCN2-205ENST00000487719 KCPQ6ZWJ8 1503 aa12.31□□□□□ -0.44
LCN2-205ENST00000487719 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
LCN2-205ENST00000487719 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
LCN2-205ENST00000487719 STARD3NLO95772 234 aa12.3□□□□□ -0.44
LCN2-205ENST00000487719 ITPK1Q13572 414 aa12.3□□□□□ -0.44
LCN2-205ENST00000487719 RFC4P35249 363 aa12.29□□□□□ -0.44
LCN2-205ENST00000487719 RIPK4P57078 832 aa12.29□□□□□ -0.44
LCN2-205ENST00000487719 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
LCN2-205ENST00000487719 COL23A1Q86Y22 540 aaPredicted RBP12.29□□□□□ -0.44
LCN2-205ENST00000487719 PDGFDQ9GZP0 370 aaPredicted RBP12.29□□□□□ -0.44
LCN2-205ENST00000487719 MRS2Q9HD23 443 aa12.29□□□□□ -0.44
LCN2-205ENST00000487719 CRKLP46109 303 aaKnown RBP12.28□□□□□ -0.44
LCN2-205ENST00000487719 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
LCN2-205ENST00000487719 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
LCN2-205ENST00000487719 CCDC87Q9NVE4 849 aa12.28□□□□□ -0.44
LCN2-205ENST00000487719 ADAMTS8Q9UP79 889 aa12.28□□□□□ -0.44
LCN2-205ENST00000487719 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
LCN2-205ENST00000487719 RPS6KA4O75676 772 aa12.27□□□□□ -0.45
LCN2-205ENST00000487719 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
LCN2-205ENST00000487719 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
LCN2-205ENST00000487719 DNAJC10Q8IXB1 793 aa12.27□□□□□ -0.45
LCN2-205ENST00000487719 ARXQ96QS3 562 aa12.27□□□□□ -0.45
LCN2-205ENST00000487719 TMPOP42166 694 aaKnown RBP12.26□□□□□ -0.45
LCN2-205ENST00000487719 CALD1Q05682 793 aaKnown RBP12.26□□□□□ -0.45
LCN2-205ENST00000487719 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
LCN2-205ENST00000487719 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
LCN2-205ENST00000487719 SLC4A9Q96Q91 983 aa12.26□□□□□ -0.45
LCN2-205ENST00000487719 A0A087WZG4 1122 aa12.25□□□□□ -0.45
LCN2-205ENST00000487719 ZPR1O75312 459 aa12.25□□□□□ -0.45
LCN2-205ENST00000487719 SNRPA1P09661 255 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms