RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
PRDM2-208ENST00000487453 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
PRDM2-208ENST00000487453 BAG6P46379 1132 aa16.77■□□□□ 0.28
PRDM2-208ENST00000487453 LY75O60449 1722 aa16.76■□□□□ 0.27
PRDM2-208ENST00000487453 RREB1Q92766 1687 aa16.76■□□□□ 0.27
PRDM2-208ENST00000487453 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
PRDM2-208ENST00000487453 PIGBQ92521 554 aa16.76■□□□□ 0.27
PRDM2-208ENST00000487453 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
PRDM2-208ENST00000487453 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
PRDM2-208ENST00000487453 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
PRDM2-208ENST00000487453 SOCS7O14512 581 aa16.74■□□□□ 0.27
PRDM2-208ENST00000487453 DEFB132Q7Z7B7 95 aa16.74■□□□□ 0.27
PRDM2-208ENST00000487453 UBR2Q8IWV8 1755 aa16.74■□□□□ 0.27
PRDM2-208ENST00000487453 EN1Q05925 392 aaPredicted RBP16.73■□□□□ 0.27
PRDM2-208ENST00000487453 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
PRDM2-208ENST00000487453 KDM3BQ7LBC6 1761 aa16.73■□□□□ 0.27
PRDM2-208ENST00000487453 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
PRDM2-208ENST00000487453 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
PRDM2-208ENST00000487453 BTBD11A6QL63 1104 aa16.71■□□□□ 0.27
PRDM2-208ENST00000487453 SMARCC1Q92922 1105 aaPredicted RBP16.71■□□□□ 0.27
PRDM2-208ENST00000487453 ATG3Q9NT62 314 aa16.71■□□□□ 0.27
PRDM2-208ENST00000487453 C5P01031 1676 aa16.71■□□□□ 0.27
PRDM2-208ENST00000487453 KCPQ6ZWJ8 1503 aa16.7■□□□□ 0.26
PRDM2-208ENST00000487453 PLSCR1O15162 318 aa16.7■□□□□ 0.26
PRDM2-208ENST00000487453 SLC39A6Q13433 755 aa16.7■□□□□ 0.26
PRDM2-208ENST00000487453 EZH2Q15910 746 aaKnown RBP16.7■□□□□ 0.26
PRDM2-208ENST00000487453 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
PRDM2-208ENST00000487453 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
PRDM2-208ENST00000487453 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
PRDM2-208ENST00000487453 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
PRDM2-208ENST00000487453 TJP1Q07157 1748 aa16.69■□□□□ 0.26
PRDM2-208ENST00000487453 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
PRDM2-208ENST00000487453 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
PRDM2-208ENST00000487453 CALD1Q05682 793 aaKnown RBP16.68■□□□□ 0.26
PRDM2-208ENST00000487453 TXNRD1Q16881 649 aa16.68■□□□□ 0.26
PRDM2-208ENST00000487453 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
PRDM2-208ENST00000487453 CCNL1Q9UK58 526 aaPredicted RBP16.68■□□□□ 0.26
PRDM2-208ENST00000487453 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
PRDM2-208ENST00000487453 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
PRDM2-208ENST00000487453 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
PRDM2-208ENST00000487453 CAMKK2Q96RR4 588 aa16.67■□□□□ 0.26
PRDM2-208ENST00000487453 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
PRDM2-208ENST00000487453 TAF1LQ8IZX4 1826 aa16.67■□□□□ 0.26
PRDM2-208ENST00000487453 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
PRDM2-208ENST00000487453 KCNQ4P56696 695 aa16.66■□□□□ 0.26
PRDM2-208ENST00000487453 NGEFQ8N5V2 710 aa16.66■□□□□ 0.26
PRDM2-208ENST00000487453 TSPYL4Q9UJ04 414 aa16.66■□□□□ 0.26
PRDM2-208ENST00000487453 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
PRDM2-208ENST00000487453 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
PRDM2-208ENST00000487453 SIK1P57059 783 aa16.65■□□□□ 0.26
PRDM2-208ENST00000487453 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
PRDM2-208ENST00000487453 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
PRDM2-208ENST00000487453 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
PRDM2-208ENST00000487453 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
PRDM2-208ENST00000487453 C4BP0C0L5 1744 aa16.64■□□□□ 0.25
PRDM2-208ENST00000487453 KCNQ3O43525 872 aa16.63■□□□□ 0.25
PRDM2-208ENST00000487453 PROM2Q8N271 834 aa16.63■□□□□ 0.25
PRDM2-208ENST00000487453 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
PRDM2-208ENST00000487453 LRRC4BQ9NT99 713 aa16.63■□□□□ 0.25
PRDM2-208ENST00000487453 GNAI1P63096 354 aa16.62■□□□□ 0.25
PRDM2-208ENST00000487453 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
PRDM2-208ENST00000487453 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
PRDM2-208ENST00000487453 IFT57Q9NWB7 429 aa16.62■□□□□ 0.25
PRDM2-208ENST00000487453 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
PRDM2-208ENST00000487453 BABAM1Q9NWV8 329 aa16.61■□□□□ 0.25
PRDM2-208ENST00000487453 CHL1O00533 1208 aa16.6■□□□□ 0.25
PRDM2-208ENST00000487453 ITPK1Q13572 414 aa16.6■□□□□ 0.25
PRDM2-208ENST00000487453 WDR63Q8IWG1 891 aa16.6■□□□□ 0.25
PRDM2-208ENST00000487453 SLC4A9Q96Q91 983 aa16.6■□□□□ 0.25
PRDM2-208ENST00000487453 MBIPQ9NS73 344 aa16.6■□□□□ 0.25
PRDM2-208ENST00000487453 IL16Q14005 1332 aa16.6■□□□□ 0.25
PRDM2-208ENST00000487453 TUBGCP6Q96RT7 1819 aa16.59■□□□□ 0.25
PRDM2-208ENST00000487453 TSR2Q969E8 191 aaKnown RBP16.59■□□□□ 0.25
PRDM2-208ENST00000487453 ZNF521Q96K83 1311 aa16.59■□□□□ 0.25
PRDM2-208ENST00000487453 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
PRDM2-208ENST00000487453 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
PRDM2-208ENST00000487453 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.24
PRDM2-208ENST00000487453 VSIG10Q8N0Z9 540 aa16.58■□□□□ 0.24
PRDM2-208ENST00000487453 LINC00116Q8NCU8 138 aa16.58■□□□□ 0.24
PRDM2-208ENST00000487453 FANCIQ9NVI1 1328 aa16.57■□□□□ 0.24
PRDM2-208ENST00000487453 GOLGA2Q08379 1002 aa16.57■□□□□ 0.24
PRDM2-208ENST00000487453 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
PRDM2-208ENST00000487453 AK7Q96M32 723 aa16.57■□□□□ 0.24
PRDM2-208ENST00000487453 ANO8Q9HCE9 1232 aaPredicted RBP16.57■□□□□ 0.24
PRDM2-208ENST00000487453 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
PRDM2-208ENST00000487453 PRAMEF22A3QJZ6 481 aa16.56■□□□□ 0.24
PRDM2-208ENST00000487453 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
PRDM2-208ENST00000487453 HMGB2P26583 209 aaKnown RBP16.56■□□□□ 0.24
PRDM2-208ENST00000487453 ZNF827Q17R98 1081 aa16.56■□□□□ 0.24
PRDM2-208ENST00000487453 MYH16Q9H6N6 1097 aa16.56■□□□□ 0.24
PRDM2-208ENST00000487453 QSER1Q2KHR3 1735 aa16.56■□□□□ 0.24
PRDM2-208ENST00000487453 UBR3Q6ZT12 1888 aa16.55■□□□□ 0.24
PRDM2-208ENST00000487453 KRT24Q2M2I5 525 aa16.55■□□□□ 0.24
PRDM2-208ENST00000487453 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
PRDM2-208ENST00000487453 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
PRDM2-208ENST00000487453 GNPATO15228 680 aa16.54■□□□□ 0.24
PRDM2-208ENST00000487453 STARD3NLO95772 234 aa16.54■□□□□ 0.24
PRDM2-208ENST00000487453 CRKLP46109 303 aaKnown RBP16.54■□□□□ 0.24
PRDM2-208ENST00000487453 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
PRDM2-208ENST00000487453 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms