RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 TDO2P48775 406 aa17.25■□□□□ 0.35
EPHB4-206ENST00000487222 IDI1Q13907 227 aa17.25■□□□□ 0.35
EPHB4-206ENST00000487222 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
EPHB4-206ENST00000487222 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
EPHB4-206ENST00000487222 U3KPZ7 1027 aaPredicted RBP17.25■□□□□ 0.35
EPHB4-206ENST00000487222 GOLGA6L10A6NI86 522 aa17.25■□□□□ 0.35
EPHB4-206ENST00000487222 TRIM27P14373 513 aa17.25■□□□□ 0.35
EPHB4-206ENST00000487222 MIS18AQ9NYP9 233 aa17.25■□□□□ 0.35
EPHB4-206ENST00000487222 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
EPHB4-206ENST00000487222 SSFA2P28290 1259 aa17.24■□□□□ 0.35
EPHB4-206ENST00000487222 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
EPHB4-206ENST00000487222 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
EPHB4-206ENST00000487222 UBXN4Q92575 508 aa17.24■□□□□ 0.35
EPHB4-206ENST00000487222 XPCQ01831 940 aaPredicted RBP17.24■□□□□ 0.35
EPHB4-206ENST00000487222 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
EPHB4-206ENST00000487222 CFAP100Q494V2 611 aa17.24■□□□□ 0.35
EPHB4-206ENST00000487222 BMP2KLQ5H9B9 411 aa17.24■□□□□ 0.35
EPHB4-206ENST00000487222 CAMK4Q16566 473 aa17.23■□□□□ 0.35
EPHB4-206ENST00000487222 SKIDA1Q1XH10 827 aa17.23■□□□□ 0.35
EPHB4-206ENST00000487222 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
EPHB4-206ENST00000487222 SFPQP23246 707 aaKnown RBP eCLIP17.23■□□□□ 0.35
EPHB4-206ENST00000487222 IQCEQ6IPM2 695 aa17.23■□□□□ 0.35
EPHB4-206ENST00000487222 ANO10Q9NW15 660 aa17.23■□□□□ 0.35
EPHB4-206ENST00000487222 LARP1Q6PKG0 1096 aaKnown RBP17.23■□□□□ 0.35
EPHB4-206ENST00000487222 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
EPHB4-206ENST00000487222 NME9Q86XW9 330 aa17.22■□□□□ 0.35
EPHB4-206ENST00000487222 LIMCH1Q9UPQ0 1083 aa17.22■□□□□ 0.35
EPHB4-206ENST00000487222 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
EPHB4-206ENST00000487222 CEP131Q9UPN4 1083 aa17.22■□□□□ 0.35
EPHB4-206ENST00000487222 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
EPHB4-206ENST00000487222 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
EPHB4-206ENST00000487222 BMP2KQ9NSY1 1161 aaPredicted RBP17.22■□□□□ 0.35
EPHB4-206ENST00000487222 WASLO00401 505 aaPredicted RBP17.21■□□□□ 0.35
EPHB4-206ENST00000487222 PTPN14Q15678 1187 aa17.21■□□□□ 0.35
EPHB4-206ENST00000487222 ARHGAP29Q52LW3 1261 aa17.21■□□□□ 0.35
EPHB4-206ENST00000487222 IDH1O75874 414 aaKnown RBP17.21■□□□□ 0.35
EPHB4-206ENST00000487222 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.35
EPHB4-206ENST00000487222 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
EPHB4-206ENST00000487222 ZHX3Q9H4I2 956 aa17.21■□□□□ 0.35
EPHB4-206ENST00000487222 PTPRCP08575 1304 aa17.2■□□□□ 0.34
EPHB4-206ENST00000487222 AKAP2Q9Y2D5 859 aa17.2■□□□□ 0.34
EPHB4-206ENST00000487222 KIAA0754O94854 1291 aa17.2■□□□□ 0.34
EPHB4-206ENST00000487222 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
EPHB4-206ENST00000487222 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
EPHB4-206ENST00000487222 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
EPHB4-206ENST00000487222 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
EPHB4-206ENST00000487222 BOLA2Q9H3K6 86 aa17.2■□□□□ 0.34
EPHB4-206ENST00000487222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.2■□□□□ 0.343e-6■■■■■ 105.9
EPHB4-206ENST00000487222 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
EPHB4-206ENST00000487222 NSD2O96028 1365 aa17.19■□□□□ 0.34
EPHB4-206ENST00000487222 RAI14Q9P0K7 980 aa17.19■□□□□ 0.34
EPHB4-206ENST00000487222 LRP2BPQ9P2M1 347 aa17.19■□□□□ 0.34
EPHB4-206ENST00000487222 ZNF608Q9ULD9 1512 aaPredicted RBP17.19■□□□□ 0.34
EPHB4-206ENST00000487222 CTAGE5O15320 804 aa17.19■□□□□ 0.34
EPHB4-206ENST00000487222 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
EPHB4-206ENST00000487222 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
EPHB4-206ENST00000487222 ZSCAN12O43309 604 aa17.18■□□□□ 0.34
EPHB4-206ENST00000487222 TBC1D9Q6ZT07 1266 aa17.18■□□□□ 0.34
EPHB4-206ENST00000487222 F6X3S4 739 aa17.18■□□□□ 0.34
EPHB4-206ENST00000487222 KIF18AQ8NI77 898 aa17.18■□□□□ 0.34
EPHB4-206ENST00000487222 EIF5P55010 431 aaKnown RBP17.18■□□□□ 0.34
EPHB4-206ENST00000487222 NOS1P29475 1434 aa17.18■□□□□ 0.34
EPHB4-206ENST00000487222 FANCAO15360 1455 aa17.18■□□□□ 0.34
EPHB4-206ENST00000487222 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
EPHB4-206ENST00000487222 LRRFIP2Q9Y608 721 aaKnown RBP17.18■□□□□ 0.34
EPHB4-206ENST00000487222 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
EPHB4-206ENST00000487222 TMCO3Q6UWJ1 677 aa17.17■□□□□ 0.34
EPHB4-206ENST00000487222 DNAAF4Q8WXU2 420 aa17.17■□□□□ 0.34
EPHB4-206ENST00000487222 PDCL3Q9H2J4 239 aa17.17■□□□□ 0.34
EPHB4-206ENST00000487222 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
EPHB4-206ENST00000487222 GBP3Q9H0R5 595 aa17.17■□□□□ 0.34
EPHB4-206ENST00000487222 DENND4BO75064 1496 aaPredicted RBP17.17■□□□□ 0.34
EPHB4-206ENST00000487222 IL16Q14005 1332 aa17.17■□□□□ 0.34
EPHB4-206ENST00000487222 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
EPHB4-206ENST00000487222 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
EPHB4-206ENST00000487222 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
EPHB4-206ENST00000487222 DDX19AQ9NUU7 478 aaKnown RBP17.17■□□□□ 0.34
EPHB4-206ENST00000487222 IGHDP01880 384 aa17.16■□□□□ 0.34
EPHB4-206ENST00000487222 KLHL34Q8N239 644 aa17.16■□□□□ 0.34
EPHB4-206ENST00000487222 C8orf76Q96K31 380 aa17.16■□□□□ 0.34
EPHB4-206ENST00000487222 METTL24Q5JXM2 366 aa17.16■□□□□ 0.34
EPHB4-206ENST00000487222 USP25Q9UHP3 1055 aa17.16■□□□□ 0.34
EPHB4-206ENST00000487222 MCM5P33992 734 aa17.16■□□□□ 0.34
EPHB4-206ENST00000487222 IGHMBP2P38935 993 aaKnown RBP17.16■□□□□ 0.34
EPHB4-206ENST00000487222 SSBP05455 408 aaKnown RBP eCLIP17.16■□□□□ 0.34
EPHB4-206ENST00000487222 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
EPHB4-206ENST00000487222 KIAA1328Q86T90 577 aa17.16■□□□□ 0.34
EPHB4-206ENST00000487222 CCDC196A0A1B0GTZ2 297 aa17.15■□□□□ 0.34
EPHB4-206ENST00000487222 BAG4O95429 457 aaKnown RBP17.15■□□□□ 0.34
EPHB4-206ENST00000487222 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
EPHB4-206ENST00000487222 CCDC102AQ96A19 550 aa17.15■□□□□ 0.34
EPHB4-206ENST00000487222 STARD3NLO95772 234 aa17.15■□□□□ 0.34
EPHB4-206ENST00000487222 FLIIQ13045 1269 aa17.15■□□□□ 0.34
EPHB4-206ENST00000487222 KLHL40Q2TBA0 621 aa17.15■□□□□ 0.34
EPHB4-206ENST00000487222 CCDC85AQ96PX6 553 aaPredicted RBP17.15■□□□□ 0.34
EPHB4-206ENST00000487222 CLIP2Q9UDT6 1046 aa17.15■□□□□ 0.34
EPHB4-206ENST00000487222 NEMFO60524 1076 aa17.14■□□□□ 0.34
EPHB4-206ENST00000487222 CCDC148Q8NFR7 591 aa17.14■□□□□ 0.34
EPHB4-206ENST00000487222 TMEM132AQ24JP5 1023 aa17.14■□□□□ 0.33
EPHB4-206ENST00000487222 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms