RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 UBA5Q9GZZ9 404 aa7.32□□□□□ -1.24
SF1-217ENST00000486960 METTL14Q9HCE5 456 aaKnown RBP7.32□□□□□ -1.24
SF1-217ENST00000486960 MAGEC2Q9UBF1 373 aaPredicted RBP7.32□□□□□ -1.24
SF1-217ENST00000486960 PRAG1Q86YV5 1406 aa7.32□□□□□ -1.24
SF1-217ENST00000486960 VIRMAQ69YN4 1812 aaKnown RBP7.31□□□□□ -1.24
SF1-217ENST00000486960 CCDC141Q6ZP82 1450 aa7.31□□□□□ -1.24
SF1-217ENST00000486960 PHRF1Q9P1Y6 1649 aaKnown RBP7.31□□□□□ -1.24
SF1-217ENST00000486960 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
SF1-217ENST00000486960 CALR3Q96L12 384 aaKnown RBP7.31□□□□□ -1.24
SF1-217ENST00000486960 SLC52A1Q9NWF4 448 aa7.31□□□□□ -1.24
SF1-217ENST00000486960 CFDP1Q9UEE9 299 aaPredicted RBP7.31□□□□□ -1.24
SF1-217ENST00000486960 QSER1Q2KHR3 1735 aa7.3□□□□□ -1.24
SF1-217ENST00000486960 CRYBG1Q9Y4K1 1723 aa7.3□□□□□ -1.24
SF1-217ENST00000486960 PAK3O75914 559 aaPredicted RBP7.3□□□□□ -1.24
SF1-217ENST00000486960 SKIV2LQ15477 1246 aaKnown RBP7.3□□□□□ -1.24
SF1-217ENST00000486960 APBB1IPQ7Z5R6 666 aaPredicted RBP7.3□□□□□ -1.24
SF1-217ENST00000486960 RBM46Q8TBY0 533 aaKnown RBP7.3□□□□□ -1.24
SF1-217ENST00000486960 COG6Q9Y2V7 657 aa7.3□□□□□ -1.24
SF1-217ENST00000486960 UNC80Q8N2C7 3258 aa7.3□□□□□ -1.24
SF1-217ENST00000486960 SPATA31A3Q5VYP0 1347 aa7.29□□□□□ -1.24
SF1-217ENST00000486960 CACNA1AO00555 2505 aa7.29□□□□□ -1.24
SF1-217ENST00000486960 RGPD8O14715 1765 aaPredicted RBP7.29□□□□□ -1.24
SF1-217ENST00000486960 TBC1D12O60347 775 aa7.29□□□□□ -1.24
SF1-217ENST00000486960 SLC15A2Q16348 729 aa7.29□□□□□ -1.24
SF1-217ENST00000486960 ZNF662Q6ZS27 426 aa7.29□□□□□ -1.24
SF1-217ENST00000486960 CICQ96RK0 1608 aaPredicted RBP7.29□□□□□ -1.24
SF1-217ENST00000486960 NPHP3Q7Z494 1330 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 TECPR2O15040 1411 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 PARP4Q9UKK3 1724 aaKnown RBP7.28□□□□□ -1.24
SF1-217ENST00000486960 MKI67P46013 3256 aaKnown RBP7.28□□□□□ -1.24
SF1-217ENST00000486960 FOXO3O43524 673 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 FOSBP53539 338 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 OS9Q13438 667 aaPredicted RBP7.28□□□□□ -1.24
SF1-217ENST00000486960 PARP9Q8IXQ6 854 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 SGSM3Q96HU1 749 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 BTG4Q9NY30 223 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 METP08581 1390 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 FYCO1Q9BQS8 1478 aa7.28□□□□□ -1.24
SF1-217ENST00000486960 FMN2Q9NZ56 1722 aa7.27□□□□□ -1.25
SF1-217ENST00000486960 PLSCR1O15162 318 aa7.27□□□□□ -1.25
SF1-217ENST00000486960 CHRM1P11229 460 aaPredicted RBP7.27□□□□□ -1.25
SF1-217ENST00000486960 ZNF16P17020 682 aaPredicted RBP7.27□□□□□ -1.25
SF1-217ENST00000486960 AMHR2Q16671 573 aa7.27□□□□□ -1.25
SF1-217ENST00000486960 FOXD4L6Q3SYB3 417 aaPredicted RBP7.27□□□□□ -1.25
SF1-217ENST00000486960 FOXD4L3Q6VB84 417 aaPredicted RBP7.27□□□□□ -1.25
SF1-217ENST00000486960 WWC1Q8IX03 1113 aa7.27□□□□□ -1.25
SF1-217ENST00000486960 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.25
SF1-217ENST00000486960 ADAMTS7Q9UKP4 1686 aa7.26□□□□□ -1.25
SF1-217ENST00000486960 LBX1P52954 281 aa7.26□□□□□ -1.25
SF1-217ENST00000486960 NAALADL2Q58DX5 795 aa7.26□□□□□ -1.25
SF1-217ENST00000486960 PRPF38BQ5VTL8 546 aaKnown RBP7.26□□□□□ -1.25
SF1-217ENST00000486960 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
SF1-217ENST00000486960 SMC5Q8IY18 1101 aa7.26□□□□□ -1.25
SF1-217ENST00000486960 VRTNQ9H8Y1 702 aa7.26□□□□□ -1.25
SF1-217ENST00000486960 PKD1L3Q7Z443 1732 aa7.26□□□□□ -1.25
SF1-217ENST00000486960 RRBP1Q9P2E9 1410 aaKnown RBP7.26□□□□□ -1.25
SF1-217ENST00000486960 SPATA31A1Q5TZJ5 1347 aa7.26□□□□□ -1.25
SF1-217ENST00000486960 SPDYE5A6NIY4 337 aa7.25□□□□□ -1.25
SF1-217ENST00000486960 PEX14O75381 377 aa7.25□□□□□ -1.25
SF1-217ENST00000486960 CD44P16070 742 aaKnown RBP7.25□□□□□ -1.25
SF1-217ENST00000486960 DCAF8Q5TAQ9 597 aa7.25□□□□□ -1.25
SF1-217ENST00000486960 DPH6Q7L8W6 267 aa7.25□□□□□ -1.25
SF1-217ENST00000486960 FAM9BQ8IZU0 186 aa7.25□□□□□ -1.25
SF1-217ENST00000486960 BCL2L13Q9BXK5 485 aa7.25□□□□□ -1.25
SF1-217ENST00000486960 STK32BQ9NY57 414 aa7.25□□□□□ -1.25
SF1-217ENST00000486960 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
SF1-217ENST00000486960 CCDC18Q5T9S5 1454 aa7.24□□□□□ -1.25
SF1-217ENST00000486960 EIF3JO75822 258 aaKnown RBP7.24□□□□□ -1.25
SF1-217ENST00000486960 FSTL1Q12841 308 aa7.24□□□□□ -1.25
SF1-217ENST00000486960 LONRF3Q496Y0 759 aa7.24□□□□□ -1.25
SF1-217ENST00000486960 GNEQ9Y223 722 aaKnown RBP7.24□□□□□ -1.25
SF1-217ENST00000486960 CCNB3Q8WWL7 1395 aa7.23□□□□□ -1.25
SF1-217ENST00000486960 TNRC6CQ9HCJ0 1690 aaKnown RBP7.23□□□□□ -1.25
SF1-217ENST00000486960 VCANP13611 3396 aa7.23□□□□□ -1.25
SF1-217ENST00000486960 IGBP1P78318 339 aa7.23□□□□□ -1.25
SF1-217ENST00000486960 FAM43BQ6ZT52 329 aaPredicted RBP7.23□□□□□ -1.25
SF1-217ENST00000486960 NME8Q8N427 588 aa7.23□□□□□ -1.25
SF1-217ENST00000486960 CDCA7Q9BWT1 371 aaPredicted RBP7.23□□□□□ -1.25
SF1-217ENST00000486960 TSPYL2Q9H2G4 693 aaPredicted RBP7.23□□□□□ -1.25
SF1-217ENST00000486960 TNS3Q68CZ2 1445 aa7.23□□□□□ -1.25
SF1-217ENST00000486960 CDC42BPGQ6DT37 1551 aa7.23□□□□□ -1.25
SF1-217ENST00000486960 SPTBN5Q9NRC6 3674 aaKnown RBP7.23□□□□□ -1.25
SF1-217ENST00000486960 LRRC37A3O60309 1634 aa7.23□□□□□ -1.25
SF1-217ENST00000486960 MAP4K4O95819 1239 aaPredicted RBP7.22□□□□□ -1.25
SF1-217ENST00000486960 CTCFP49711 727 aaPredicted RBP7.22□□□□□ -1.25
SF1-217ENST00000486960 MNX1P50219 401 aaPredicted RBP7.22□□□□□ -1.25
SF1-217ENST00000486960 ZNF827Q17R98 1081 aa7.22□□□□□ -1.25
SF1-217ENST00000486960 ESCO1Q5FWF5 840 aa7.22□□□□□ -1.25
SF1-217ENST00000486960 SH3D19Q5HYK7 790 aa7.22□□□□□ -1.25
SF1-217ENST00000486960 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.22□□□□□ -1.25
SF1-217ENST00000486960 KIF1AQ12756 1690 aa7.22□□□□□ -1.25
SF1-217ENST00000486960 AKAP12Q02952 1782 aa7.21□□□□□ -1.25
SF1-217ENST00000486960 CASP8AP2Q9UKL3 1982 aa7.21□□□□□ -1.26
SF1-217ENST00000486960 hCG_2014768A0A024R1R8 64 aa7.21□□□□□ -1.26
SF1-217ENST00000486960 CARNS1A5YM72 827 aa7.21□□□□□ -1.26
SF1-217ENST00000486960 HSPA8P11142 646 aaKnown RBP7.21□□□□□ -1.26
SF1-217ENST00000486960 ARID4AP29374 1257 aaPredicted RBP7.21□□□□□ -1.26
SF1-217ENST00000486960 RBM10P98175 930 aaKnown RBP7.21□□□□□ -1.26
SF1-217ENST00000486960 TXNRD1Q16881 649 aa7.21□□□□□ -1.26
SF1-217ENST00000486960 GLMNQ92990 594 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms